Chlamydia psittaci RD1: Cpsi_5561
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Entry
Cpsi_5561 CDS
T02153
Name
(GenBank) putative cytotoxin
Organism
chr
Chlamydia psittaci RD1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3491
TcdA_TcdB
TcdB_N
Gly_transf_sug
Peptidase_C58
TrmB
Motif
Other DBs
NCBI-ProteinID:
CBY17081
LinkDB
All DBs
Position
complement(630225..639986)
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AA seq
3253 aa
AA seq
DB search
MTLPDKISSSHSSRNQSDSFAYHSETSHQNTWPSSNGSSDITLYNSLIKRNNTAEDVVKI
GAMIQESIRNDLKKKVGGGGGNFSPAHHTGNWKTSLLYNTSRLLAHLFSTTIQSARITPT
PVSPRSENLQRGNSLSSIKKSSPSQTSTVSFPTSSVPITKKAKSHLHKVHKTSDHRVSRK
KRAAAVDPEASVVQKYDLTDKNIVSRLQLTEEQVKSCQKSVNNLKKAISRYGGLRNKNSR
VGQRLLVDQSRFMEDIQKKLHLSKDHKASSEVMGMIKSEYKSHRVEVEKFIHGIWVAGAP
PDGTDAYIKTFLSAYDNFQFYFWVDSKAYGAAKFTSILKKIAFTAAIKNLRESIPEGAQE
FIRRYDELRSKYGSTKDPKLQNEYLKDMRSMRDSYVALNKSVKDAFNALLLKETVMLQDS
FFNFCNMKGIDSISDQIRIEYLKYELGFSNEEIEDYKKLIDNNKKTIQEIVDKVNKDVGS
KKVIIRDISELESMRDKTNLHNYDTEMFLRWNYAAATDQVRMYMLLEHGGIYADLDMMPA
YSPEITKIIYDVGGDAFFENLQIRRSISDIVLKLVTDSSASSRSISIEEIAKEVDMSKIS
AEEKRKLSQLIGELQKFSKSHEKKDLFAKMSSDVIRDFMPILQRYHKWEKKWNVRGLNGL
MMSHKGSAVVEAVIDAQREKYEELKTLRENVLSGMFNGLEDLSNLDLMSEVGGALVKDYL
EGSLFYDFRQDSITPGAVSTLGITGPDLIVKVMKQFFREQGPIGQDFLENQGKRLGKEAF
LGAYKRVSDNPVRFDWLHPITVGANDVTPADDSTWCGIKHQDASDLLFSDPSKLSDKPVK
GISRSTIDLEAFTKLWTEDAKAACPKELLQRFNDVISQLSLDIGELAELDHALSVVMQNL
PSDPVARESIFSLQIQLAEFVRSVKFPISNQVNFFPNGHSNFEKDLGQAIKLYLDTDSQT
KVVLWESPLIDRALFLKDMLAISERLLSIANFIDSVDQASPSYSEIELLTRYGELKAKDS
VDLLSAPELEDFLDVTNKIAENERLQSKITEIEYQVSSGYLFRHYEQLLSSFLSLSEKDF
KSEMLSFAKKIVADDSLGKSDQKARDSWYADICDKIYAQRVTEASSRIREFMKKFEGNER
VALLNADKYLSGHPLFERIQKEGYAFQDFQSVVRLILASSGVSGILSAESVFPAPSRRLV
DTMKSVLSNDYDDMQRALPLVYELLSVDKNSAEAKQVQDRMKQEGFEALGEKLSSFSTPN
LLTPPTDSSVTALGARYGIDYGRESEQTMLSIAPGIFNPAGYTMDLYLQGLYEIHREIHS
GSLTEEKAKTILQSKKADCFINDQGIEALLRYSDSKYYCSLTEVHRILTGQFFLAEASKY
LISSALPGISPIVDSDKNFGRPLLTTIDSSSMVNPYDYLGRGLSKDLLSAPRDIPSIRSI
VEGAKYTSSSWSEFFNTQAEGWSDLANRLGGKSIDLHPQTFLYSAEGRCMGLSMLYMSAK
DVASYDLIQENLTAVSSLYQEQDREGLPLTPTDRQLLDRCQALVDWLQLQGNKYLNSPDV
FSSASWSLFTLREKFKDTSLKSVLITTPAHSLTLQKLGEGVYRFTDPNFGHVDFPSVDQA
FYFLSEIVDESYTIKQRYGFSDYARVHEQIKIYIPNSKLFENTLFLGTDLGLTSQHQSTT
LEKMSARGSVMISQILVPWRTLYQIGGSVDHQRISETTKESDLSRLKINGDVLNNYLSKH
VLDSDTASLLQTLLKTHGLEPGTKRIKGRAITDTPNEVASLIQTSKNSMVRIQSSLQVMI
KAIAKKLKSISITDNDKAKIKTVDIDDADNLTVEIETSDKRSKTITFDGKGLAHSFKRVG
RMLNELSGTGVLDLDLGMSIVSLIQYSRMVEQGHSSDELAKFNLFMGVKAMSELTLGSVI
QVMGKKFITDAGVNTFRLESAVASKLQTVAQKVGGSAGRALASAAKVLELPILETVAGVW
NLYNSVTILTQEASSFEHAAARVQVAFDTISLALTLSSVAAPALMLAAGPIAAIGMGAAA
IARNVAYHESRHEAWLKYKDFLEQGSKDIVVSLPEQGILDLSGNHVLGNVFLDLSQNPPV
LTGDQSYNANRWIGHHPELTDWQIREMLSYAYSISPTRALAQGHANSYWPRNIPKIPKGI
YTTVIVGYGIQYKAVTEVIYLSNQIVWREAVMETDSPYYQPPLTSVSQQTKIVAGKHPLT
VLPVRLLDGDSKEDQKARMEQANSYKDYKIIVEGGVGGLVVQIGGAGFYNLTGDPRANNV
ISFRAIPSPYSVVFDLGKEEQDVPIVKINENSENDDEYKILTIRQRGFGSIFGSERGYDT
LTGKNNTNFYLGLGGGAIYSGGGNCRYYIPDLPQHTSIFLNSTSTSHTINLDKKINEIKM
MGGVLALIPTYQPDDPTAGLHIYTASTHDSIASWVGKVKILLLDGVEIQLVQKENSRLIF
GITGCDHSKWQAEQPEEAGYPESILKTLQKLPWEFGNTFTLVRKDGLVVFSFTDRSFTYR
PHPYAMVSVRTSSQYNVVVEGAEGCTYILKSAPRIMSKNITIRLKASGAISAVIDLYSLI
ISSITGKVPLDADNCMEIKISSPRYHIPVILKWSGEVPRETMIEIADNARSELGEWYDML
VQNRGEEQSIYRRSMLVSDRIESVKNLDDAVILLNSEDEESYPSHILGIENKEEKDFLIF
GKLWSGTFMGSMENLRWVTTAPSKAFNVTIPANNIKYLYFQGGEKSGKNIVFYSTISPAV
LEVSIQPKEAIPRSRWKSCSQIDVYWTSLILEDFVRYRVSDETAELSRQLMYAKELVKIE
RNDFCLRFFYVRGGDGIGSIDLRFKDFFSQTIVKERIASGNTNDYIPLINEKYRDHLELK
LGSETFSLAILAAEFLSTHHVTSLEHHKNVPYLLEIPTHIPRFPKANIFTYTIDSKANYT
SWNDFRWLPISPSMKKYELPGLAKRGASYYLDSTSGDLYLTRIILFGETGVEALLIKFPN
YKCKWREFQDIIVMVRNILTIANSNTIFRSGTMFSGPAIQHVRFSDALWMRRITQSVAIT
SIETGVNSHSEPVVYSDFMKGGGHRSQEDYGLWDLRDRFNKSDRSRIYDYYLLKEAIHLC
EEEQKWQIPESMLEYAFGYYSQVSSTWISNQIAEGTKLFLPANSITMSLITSQGAMFTKQ
QEMSGCVVHYRLGGLNKVAKHVIFIQVAGEIWFKIKTGISILVKKVDESQYPSGHIYVVA
EVIGEDSGKTKLF
NT seq
9762 nt
NT seq
+upstream
nt +downstream
nt
atgactctccccgacaaaattagttcgtcgcattcttctcgcaatcaaagtgacagcttt
gcctatcatagtgaaacaagtcatcagaacacatggccctcttctaatggcagtagcgat
ataactctttataattctctaatcaaaagaaataatactgctgaagatgttgtgaaaatt
ggtgcgatgattcaggaaagcattcgcaacgatcttaaaaaaaaagttgggggggggggg
ggtaacttctctcctgcacatcatacagggaattggaaaacttcgcttttatacaataca
tcgcgacttctagcacatttgttttctacaacaatacagtcagcgagaattacccctact
ccagtgtcacctcggtcagaaaacctgcagaggggaaattccctatcttcaattaaaaag
tcgagcccatcgcaaacaagtacagtatcttttcctacgtcgtccgtccctattactaaa
aaggcaaaatctcatcttcataaggtccacaaaacttctgatcatcgtgtgtctaggaag
aaacgcgcagcagcagtagatccagaggcaagtgttgtacagaagtatgatcttactgat
aagaatatcgttagtcgtcttcagttaactgaagagcaggtaaagtcctgtcagaagtct
gtgaataatttaaaaaaagcaataagtcgttatggaggtttgcgtaataagaactctaga
gtaggtcaacgtttactagttgatcaatcccggtttatggaagacattcaaaagaaactt
catttgtctaaagatcataaagcttcttctgaagtcatgggaatgattaaaagtgagtac
aagtctcatcgagtggaagtagagaagtttatccatgggatttgggttgctggagcaccg
ccggatggtacggatgcgtatatcaagacgttcttgagcgcatatgataattttcaattt
tatttctgggtagatagtaaggcgtatggggctgcgaagtttacttccatactgaaaaaa
atagcttttactgcagcgattaagaatctgagggaaagtatacctgaaggtgctcaagag
tttatccggagatatgatgaattaaggagtaaatatggctcgacaaaagatcctaaactc
caaaatgagtaccttaaagatatgcggtctatgagagactcctatgttgcattgaataag
agcgttaaagacgctttcaatgctctccttttgaaagaaactgtcatgctacaagatagt
ttctttaatttttgcaatatgaaaggtatcgactctatatctgatcagatacgtatagag
tatctaaaatatgagctgggtttctcaaacgaagagatagaagattacaagaagctgata
gacaacaataagaaaacaatccaagagatcgttgataaagttaataaggatgtaggaagc
aaaaaagttattattagggacatctcagagttagaatccatgagagataaaactaatctc
cataactatgatacggagatgttcttaagatggaattacgctgctgccacagatcaagtc
agaatgtacatgctgctcgagcatggaggaatctatgcagacttggatatgatgccagcc
tactctccagaaattacaaagataatttatgacgtcggaggagacgcatttttcgaaaat
ctccaaatacgacgctctatatccgatattgttctcaagcttgttactgacagctctgct
agctctcgctcaatttctatagaggagattgctaaggaggtggatatgtccaaaatatca
gcagaagaaaagagaaaactttctcaattaataggtgaactacaaaaattctcaaagtcg
catgagaagaaagatctttttgcaaaaatgtcttcagacgtgattcgtgattttatgcct
atattacagcggtaccacaaatgggaaaaaaaatggaacgttcgaggattgaatggctta
atgatgtctcataaaggaagtgcagtagtagaggctgtgattgatgctcagagggaaaaa
tatgaagaattaaaaactctgagagagaacgtgttgagtggtatgtttaatggtttagaa
gatctttcaaatttagatcttatgtctgaagtaggaggtgcattagttaaagattacctt
gaggggtctttgttttatgattttcgtcaggattcgatcactcccggtgcagtcagtact
ctaggtattacaggccctgatttgattgtgaaggtgatgaagcaattttttcgtgaacaa
gggcctatagggcaagatttcctagaaaatcaagggaaaagacttgggaaggaggctttc
ttaggggcatacaaaagagtgtcggataatcctgtacgcttcgattggctacatcccata
actgttggagcgaatgatgtaacgcccgcggatgatagtacctggtgtggaatcaaacat
caggatgcgagtgatttattgttttctgatccctcaaaattaagtgataagcctgtgaag
ggcatatctcggtccacgattgatttggaagcatttaccaaactttggactgaagatgca
aaggctgcatgtcctaaagaattattacaacgtttcaatgatgtgatttctcagctgtca
ttagacataggggaacttgctgagctagatcacgctctttctgttgtaatgcaaaatcta
ccttcagacccagtagcaagggagagtatattttctctacagatacaactagctgaattt
gtgcgatctgtaaaattcccgatatccaatcaggtgaatttcttccctaatgggcatagt
aattttgagaaagatttaggacaggccatcaagttatatttagataccgattcacaaaca
aaagttgttctctgggaaagtcctttaatcgatcgtgccttattccttaaggacatgctt
gccatatccgaaagattattatccatagctaactttattgattctgtagatcaagcttct
ccttcttactctgagatcgagcttttgactcgatatggagagcttaaggctaaagatagt
gtagatttattatctgcgccagaattagaagattttttagatgttacaaataagattgca
gaaaacgaaagattacaaagtaaaattaccgagatcgaataccaagtgtcttcagggtat
ttgttcaggcattatgaacaactgttatcctccttcttaagtttatcggaaaaggacttc
aagagtgagatgttatcttttgcaaagaagatagtggcagatgacagcttgggtaagagt
gatcagaaagccagggatagttggtatgcggatatttgtgataaaatatacgcacagcgc
gttactgaagcttcttcacgaatacgagagtttatgaagaagtttgagggcaatgaacgt
gttgctttgctcaatgcagataaatatctatcaggtcatcccttgtttgagaggatccaa
aaagaggggtatgcgttccaagattttcaaagtgttgtacggttaatattagcgagctct
ggggtttcaggaattttatctgctgaaagtgtattcccagcgccttctaggcgattagta
gatacgatgaaatccgtgcttagtaatgactatgatgatatgcagcgagctttgcctttg
gtatatgaactgctgtctgtagataaaaacagtgcagaagctaaacaagttcaggatcgt
atgaaacaggagggcttcgaagcattaggagaaaaattatcatcattctctactcctaat
ttgcttactccacctacggatagtagtgtaacagctttaggagctcgctatgggattgat
tatggaagggaatccgaacaaactatgttgagtatagctcccgggatatttaaccctgcc
ggctatactatggacctttatttacaaggtctttatgaaatacacagagaaatccattca
ggatctttgacagaggaaaaagctaaaacgattcttcaaagtaaaaaagctgattgtttt
ataaacgatcaaggtattgaagcacttcttagatattcagatagtaagtactactgttct
ttgacagaagttcacaggatattaacaggacagtttttcttggcagaggcatcgaagtat
ctaatttctagtgctcttcctggaatcagccccattgttgatagtgataagaatttcggt
cgtcccttgttaacgactatagattcttcttcaatggtaaatccctacgactatcttggg
cgaggattaagcaaggatttgttatcagctcctcgtgatattccctcaatacgctctatt
gtggaaggggcaaaatatacctcatcttcttggtcagaatttttcaatacacaagcagaa
ggttggtcagatttagccaaccgtttagggggcaaatccatcgacctgcatcctcagacc
tttttgtatagtgcagagggacggtgtatggggctctcaatgttatacatgtcagccaaa
gatgtagcgtcttatgatcttatccaagagaatctgacggcggtttcatcgttatatcag
gaacaagatcgagaaggtttaccattaacaccaactgaccggcaattgttagatagatgt
caggcattagtggattggttacaattgcaagggaacaagtatttgaactctccagatgta
ttctcttcagcgtcttggagtctttttacgctaagagaaaagtttaaagacacatcgtta
aaaagtgtcctaatcactacgccagctcatagcctaactttgcaaaagctgggcgaaggt
gtgtataggtttacggatcctaattttggacatgtcgactttccgtccgttgatcaagct
ttttatttcttaagtgagattgtagacgaatcctatacgataaaacagcgctatggattt
tctgattatgcacgtgtgcacgagcaaataaaaatatatatccctaactctaaattattt
gaaaacacattgtttttgggcactgacctaggattaacttctcagcatcaatccacgact
ttggagaagatgtcagcaagaggaagtgtgatgatcagtcaaattctagttccatggcgt
actctatatcaaattggagggtctgtcgatcatcaaagaatatcggagacaacgaaagaa
tccgacttgagtcgtttgaagatcaatggagatgttttaaataactatctctctaagcat
gtactagatagtgataccgctagtttgctccaaactctcttaaaaactcatggtttagag
cctggaaccaagagaattaaagggagagcaattacagatacacctaatgaagttgcctct
cttatacaaacatcaaagaacagcatggtaaggattcagtcatctttgcaagttatgatc
aaggctattgctaagaaactgaaatccatatccattactgataatgataaagcaaagatc
aaaacagtagatattgatgacgctgataatctaacagtagaaatagaaacttctgataaa
cgatcaaaaactatcacgtttgatggaaaagggttagcacattcctttaagcgtgttgga
aggatgcttaacgaattatcgggcactggggttttggatttagacttgggtatgtccata
gtttctctaatccaatattctcgcatggtagaacaaggacactctagtgatgagttagca
aagttcaacttgttcatgggtgttaaagctatgtctgagttgactctgggatcagtcatt
caggtaatgggcaagaagtttattacagacgcaggagtaaacacttttagattagagagt
gctgtggcatctaaattgcaaacagttgctcaaaaggttggaggaagtgcaggaagagct
ttagcgagtgcagctaaggttttagaacttcctattttagaaacagtggcgggtgtttgg
aatctctataatagtgttaccattcttacgcaagaagcctcttcctttgaacatgcggca
gctcgagttcaggtggcttttgatactatttctctcgctcttacattatcttctgtcgcc
gctcctgccttaatgttagcagcaggtcccattgcggcaattggtatgggagcagcggca
attgcgcggaatgtagcttatcatgaatcacgtcacgaagcttggttgaaatacaaagat
ttcttggagcaggggagcaaagacattgtcgttagtttgcctgagcaagggatattagac
ctatcaggaaatcatgttttaggaaatgtctttttagatctaagtcaaaatcctccggtt
ttgacaggagatcaatcatataatgctaaccgatggattggtcatcatccagagctgacg
gattggcaaattcgtgagatgttgagttatgcctatagcattagcccgacaagagcattg
gcgcaaggacacgccaatagttattggcctagaaacattcccaagatacctaagggaatt
tatactacagtcattgtaggatatggtatccaatataaagccgttaccgaggtgatctac
ctttctaatcagattgtgtggcgggaagctgtcatggagactgattcaccctattaccaa
cctcccctaacttctgtatcacaacaaacaaaaatcgttgcaggaaagcatcctctaact
gttctaccggtacgtctcttggatggagattctaaggaagatcagaaagcacgtatggaa
caagcgaattcctacaaggattataagattatagtggaagggggagtaggaggattagta
gttcaaattggtggtgctggattttataatttaacgggggatccaagagcaaataatgtt
atctcattccgtgctataccatcaccgtattctgtggtttttgatcttggaaaagaggaa
caagacgtaccaatagtaaaaatcaatgaaaacagtgagaatgacgacgaatacaaaatt
ctaacaattaggcaaagaggttttggatctattttcggctctgagcggggttacgatacc
ctgacagggaaaaataataccaacttttatctaggattaggtggtggggccatttattct
ggaggagggaattgtcgttactatatacccgatctccctcaacatacttctattttctta
aattctacatctacgtctcatactatcaatttggataagaaaattaatgagatcaaaatg
atgggaggagttttagctttaatacctacttatcagccagacgatcccactgctggatta
cacatttatactgcatcaacacatgatagtatcgcatcctgggtaggtaaagttaagata
ttgttattggatggagtagaaatacaattagtacaaaaagaaaacagtcgccttattttc
ggaattactgggtgtgatcatagtaaatggcaagcagagcaaccagaagaagcggggtac
ccagaaagtattcttaaaactttgcaaaaactaccttgggaattcggtaatacatttacc
ttggttcgtaaggatggtttggtagtatttagtttcacagatagatcattcacctatcgt
ccccatccatatgcaatggtttcagttcgcacgagctcccaatataacgtagttgtagag
ggagcagaggggtgtacgtatattctcaaatctgctccccggattatgtcgaaaaatatc
acgattcgattaaaggcaagtggcgcgatttcggcagttatcgatttatattctctcatt
attagttcgataacaggcaaagttcctttagatgctgataattgcatggagataaaaatt
tcttctcccagatatcacatccctgtcattctaaagtggtccggagaagtgcctagagaa
acaatgatagaaatcgccgataacgcccgtagtgagctaggagaatggtatgacatgcta
gtgcaaaaccgaggagaggagcaatctatttacagacgcagcatgctagtttctgataga
atagaaagcgtaaagaacttggatgacgctgttatcctactcaactccgaagacgaagaa
agttatcctagtcatattttaggtatagaaaacaaggaggagaaggactttctaattttt
ggcaagttatggtcaggaacttttatgggaagcatggaaaatttaagatgggttaccaca
gctccttccaaagcatttaatgtgactataccagcaaataatattaaatatttgtacttc
cagggtggggaaaagtccggtaaaaatatcgtcttctatagcacgatatcacctgctgta
cttgaagtaagcatccaaccaaaagaggcgataccacgaagtcgatggaaatcttgtagc
cagatagatgtatattggacttctctcattctagaagattttgtgcgttatcgtgtcagt
gatgaaacagcagaactctctagacagttgatgtatgcgaaagaattagtaaaaatagaa
cgaaatgatttttgtttacggtttttctatgttcgcgggggagatggaataggaagtatc
gatctgcgatttaaggatttctttagccaaactatcgtaaaggaaaggattgcctctgga
aatacaaatgattatatcccattaattaatgaaaagtatcgcgatcatttagagttgaaa
ttagggtcagaaacattcagtttagcaattttagcagcagaattcttatcaactcaccat
gtcacgagtttagaacatcacaaaaatgtcccttatctattggaaattcctacacatatt
cctcgcttccccaaagcgaatatttttacttatacgatagattctaaagctaattatact
tcctggaacgatttccgttggctaccgataagtccctctatgaaaaaatatgaacttcct
ggactagctaaacgaggagcttcctattacctagattctacatccggagatttgtactta
actcgtataatactatttggagaaactggcgttgaagctctccttataaaattccctaac
tacaagtgtaaatggcgggagtttcaagatataatagtgatggtaaggaatatactgact
attgcaaatagtaatacaatttttcgatccggaactatgttttctggaccagctatacaa
catgtccgatttagtgatgcactttggatgaggagaattactcagagcgttgcaattact
tcaatagaaacaggagtaaactcccatagtgaaccagtagtttattctgattttatgaaa
ggagggggccaccgctctcaggaagactacggtttatgggatttgcgcgatagattcaac
aagtctgatagatcgagaatatatgattattatttattaaaagaagccatccatttatgt
gaggaagagcagaaatggcaaattcctgaaagcatgttagaatatgcttttggctattat
tctcaagtttcctctacatggatcagcaaccaaatagcggagggtacaaaattattttta
ccggcgaattcgataacaatgtctctaatcacatcgcaaggggcgatgttcaccaagcaa
caagaaatgtcaggctgtgtcgtacactatagattaggaggactgaataaggtggctaag
catgttattttcatccaggtcgcaggtgaaatatggtttaagatcaaaacaggcatttct
attctcgtaaaaaaagttgacgagtctcaataccccagtgggcacatttatgtggttgct
gaggtcatcggcgaggattcgggaaaaacaaagttattttaa
DBGET
integrated database retrieval system