Chromobacterium sp. ATCC 53434: CXB49_03540
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Entry
CXB49_03540 CDS
T05234
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CXB49_03540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_03540
Enzymes [BR:
chro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CXB49_03540
DNA repair and recombination proteins [BR:
chro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CXB49_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
AcylCoA_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
AUH53510
UniProt:
A0A2H5E2J4
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All DBs
Position
complement(768369..769733)
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AA seq
454 aa
AA seq
DB search
MTRPDFFERSQDVISVSSLNRMARDLLEAGMPPVWIGGEISNLTLAASGHGYFSLKDGGA
QVRCVMFRHKLSQLPFRPQEGMQVELRGQVTLYEARGEFQISVGEMRAAGLGRLFEAFER
LKARLQAEGLFDSARKRELPAHPAAIGIVTSPAAAALRDVVSTLRRRMPGIPLILYPAQV
QGEGSAQQIAGAIRLAGERREVDVLIVCRGGGSIEDLWSFNEEIVARAVSACPIPTVSGV
GHETDFTICDFVADRRAPTPTAAAELVSPNREHLAMQLEQARRALERALARLLTDKAQQL
DFLGRRLVHPGSRLQAQRERLAALSQTLRLRVRAGFEQSRWRLQLAGSRLARHRPDPAAD
AQALRQRQDRLRIARDRLLESRRRQLAQLAATLTALNPDAVLARGYAIVQKRDGQAVKNP
AELLNHEKVTLRLAEGSTEARIEHAEGAQPELPF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgacaagaccagatttttttgaacgcagccaggatgtcatcagtgtctcctccctcaac
cgcatggcgcgcgacctgctggaagccggcatgccgccggtatggataggcggggaaatc
tccaacctgacgctggccgcgtccggccacggctatttctcgctgaaggacggcggcgcc
caggttcgttgcgtgatgttccgccacaagctgtcgcaactgccgttccggccgcaagag
ggcatgcaggtggagctgcgcggccaggtcacgctgtacgaggcccgcggcgagttccag
atcagcgtcggcgaaatgcgcgccgccggcctcggccgcttgttcgaggccttcgaacgg
ctgaaggcgcggctgcaggcggaaggcttgttcgacagcgcgcgcaagcgcgagttgccg
gcgcatccggccgccatcggcatcgtcacctcgcctgccgccgccgcgctgcgcgacgtg
gtcagcaccttgcgccgccgcatgcccggcatcccgttgatcctctacccggcccaggtt
cagggcgagggttcggctcagcagatcgccggcgccatccgcctggccggcgagcggcgc
gaagtcgacgtgctgatcgtctgccgcggcggcggcagcatagaagatctgtggtcgttc
aatgaggagatcgtcgcccgcgccgtctccgcctgcccgattcccaccgtcagcggcgtc
ggccacgagaccgacttcaccatctgcgacttcgtcgccgaccgccgcgcgccgacgccg
accgcggcggcggaactggtgtcgcctaaccgcgagcacctggccatgcagctggaacag
gcccgccgcgcgctggaacgggcgctggcgcgcctgctgaccgacaaggcccagcaactg
gatttcctcggccggcgcctggtccaccccggctccaggctgcaggctcagcgcgagcgg
ctggccgccttgtcgcagacgctgcgcctgcgcgtgcgcgccggcttcgagcaaagccgc
tggcggctgcagctggcaggcagccgattggcgcgccaccggcccgacccggccgccgac
gcccaggcgctgcggcaacggcaggacaggctgcgaatcgcccgcgaccgcctgctggag
agccgccgccggcaactggcccagctggccgccacgctgaccgcgctgaatccggacgcg
gtgctggcgcgcggctacgccatcgtgcagaagcgcgacggccaggcggtgaaaaacccg
gccgagctgctgaatcatgaaaaggtgacgctgcggctggccgaaggcagcaccgaggcg
cggatcgagcacgctgagggcgcccagcccgaactcccgttctga
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