Cytophaga hutchinsonii: CHU_0111
Help
Entry
CHU_0111 CDS
T00385
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHU_0111 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
chu01007
]
CHU_0111 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chu03016
]
CHU_0111 (aspS)
03029 Mitochondrial biogenesis [BR:
chu03029
]
CHU_0111 (aspS)
Enzymes [BR:
chu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CHU_0111 (aspS)
Amino acid related enzymes [BR:
chu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CHU_0111 (aspS)
Transfer RNA biogenesis [BR:
chu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CHU_0111 (aspS)
Prokaryotic type
Other AARSs
CHU_0111 (aspS)
Mitochondrial biogenesis [BR:
chu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CHU_0111 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ABG57404
UniProt:
Q11YW2
LinkDB
All DBs
Position
133373..135223
Genome browser
AA seq
616 aa
AA seq
DB search
MLRSQTCGELRISDVNKEVTLCGWVARVRDKGGMIWVDLRDRYGMTQLILEEGKSSAELL
ETSRKLGREFVIRATGNVIERVAKNPKMPTGDIEVKITALTILNESKTPPFLIEDETDGG
DETRMKYRYLDLRRDAVRKNLELRHKVSRETRTYLDANNFLEVETPVLIKSTPEGARDFV
VPSRMNPGQFYALPQSPQTFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMS
FVEQEDILNMFEGLVRHLFKTVKEFDLPEVPRMLFADAMKYYGSDKPDIRFGMKFVELTD
IVQSQGFQVFDEANLVVGINAEGCAEYTRKEIDALTEFVKRPQVGAKGMVWVRYAADGTL
KSSVDKFYSADDLKKIAERFNAKPGDLMLILSGNGNKVRGQLNDLRLEIGSRLGLRPKDK
FAALWVIDFPLLEFGEEEQRWFAMHHPFTSPKDIDAFMKLPFDQLGSVNANAYDLVINGV
EVGGGSIRIYDRTVQNKMFEVLGFTEEEAKAQFGFLLEAFEYGAPPHAGLAFGFDRLCSI
FGGVDSIRDFIAFPKNNSGRDVMIDSPSVIDDKQLKELSIDVKVADKGRIGIPNIIEETF
NVKRDTSKDDHNITAN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttacgttctcaaacgtgtggtgaattaagaatatcggatgtaaataaagaagtaact
ctttgcggatgggttgcacgtgtacgggataaaggcggcatgatatgggttgatttacgt
gaccgttatggcatgacgcaattaattttagaagaagggaaatcatctgctgaactattg
gaaacatcacgcaaacttgggcgtgagtttgttatcagggcaacaggaaatgttattgaa
cgtgttgcgaaaaaccctaaaatgccaacgggggatatcgaagttaaaattactgcatta
acaatattaaacgaatctaaaacaccaccatttttgatcgaagatgaaacagacggtgga
gatgaaacgcgtatgaagtatcgctatctggatttaagaagagatgctgtacggaaaaat
ttggaactgcgccataaagtttcaagagaaacaagaacatatttagatgcaaataatttt
cttgaagttgaaacgcctgtattgatcaagtctacaccggaaggtgccagagattttgtt
gttccttcaagaatgaatccggggcaattctatgcattgccgcaatcaccgcaaacattc
aaacaattgttaatggtagctggctttgacagatactttcaaattgtaaaatgtttccgt
gatgaagatctgcgtgcagaccgccagccggagtttacacaaatagattgtgaaatgtct
tttgttgaacaggaagatattttaaatatgtttgaaggcctggtgcgtcacttgtttaaa
acagtaaaagaatttgatctgcctgaagttccgcgtatgttatttgcagatgcaatgaaa
tactacggaagtgacaaaccggatatccgtttcggaatgaagtttgttgagcttacagat
atagttcaatcacaaggcttccaggtttttgatgaagcaaatcttgtcgttggtatcaat
gcagaaggttgtgctgaatatacacgtaaagaaatcgatgccttaacagaattcgtgaag
cgcccgcaagtcggcgctaaaggaatggtgtgggtacgttacgcagctgatggcacattg
aaatcttctgtagataaattttattctgcagatgatctgaaaaaaatcgcagaacgtttc
aatgcgaaaccgggggatttaatgttgatcctttccggtaacggaaataaagtgcgcgga
caattaaatgatttacgtctggagataggaagccgtttaggtttacgtccgaaagacaaa
tttgctgcgttatgggtgattgactttccattgttagagtttggtgaagaagagcaacgc
tggtttgcaatgcaccatccattcacatcaccgaaagacattgatgcctttatgaagctt
ccgtttgatcagctaggaagcgtgaatgcaaacgcatatgatttagttatcaatggtgtt
gaagttggtggtggttctatccgtatctacgacaggacggttcagaataaaatgtttgaa
gtattgggctttacagaagaagaagcgaaagcacaattcggcttcctgcttgaagcattt
gaatatggcgcgccaccacacgctggtttagcattcggtttcgatcgtctgtgttcaatc
tttggtggtgtagattctatccgtgatttcattgcttttcctaaaaacaattcaggacga
gatgtgatgatcgattctccatctgtgattgacgataaacaattaaaagaattaagcatt
gatgttaaagttgctgataaaggaagaattggtataccaaatattattgaagaaacattt
aatgttaaacgtgatacttcaaaagacgatcataatataactgctaattag
DBGET
integrated database retrieval system
