KEGG   Cytophaga hutchinsonii: CHU_2837Help
Entry
CHU_2837          CDS       T00385                                 

Definition
(GenBank) ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
chu  Cytophaga hutchinsonii
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:chu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    CHU_2837
Enzymes [BR:chu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CHU_2837
DNA repair and recombination proteins [BR:chu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CHU_2837
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(3237294..3239984)
Genome map
AA seq 896 aa AA seqDB search
MALETYKEKRNFKHTPEPVAKKNAAGTELKFVIQRHAASHLHYDFRLEMEGVLKSWAVPK
GPSLNPSDKRLAMMVEDHPFAYRTFHGVIPEGNYGAGIVEIWDEGTYHAIGNEDRKTGEK
ELLADLKKGNLKFVLHGKKLKGEFALVKIKNNNSSKDNAWLLIKHKDAYATEDAYSSEDY
VPANSKIVKKTAASKKPATPVSKKSAIKMVDDKPATDKKKVQSAPAQKIKQGKDPMPHEV
KPMLAKLKDAPFDSPEWIFEIKWDGYRAIAEIDQGKVELYSRNLISFTKKYKPIVESLQS
FGHNVVLDGEVIVLNADGTSSFQMLQQYDETPSPDLCYCVFDILFLDGRDLRDLPLLERK
AILKKVIPDLPNLKYSDHVEKEGIRFFELAKKNKLEGIMAKRADSIYRLGSRSDQWIKLK
IVKSQEAIICGFTAPRNSRKDFGALILGAYENGRLVYIGHTGGGFTMALLASTLKLMKPL
IQKESPFDVKIKTNEKVTWIKPKLVCAIAFSEWTSDGHMRQPIFQGMRIDKKVSEVTREL
PTVINVPQDNAMEVTRNIKQTAAKTSTKKTAHKKAASKKTTTNKKTTDVAAAENSKAGEF
KIDGQVLKISNRSKVYWPEDGYTKGDLIDYYMQAADYILPYLKDRPESLNRHPNGIDGSS
FFQKDMGDTLPDWIEAKEIFSESNSKDINYVLCQNKATLIYMANLGCIEINPWNSRVKKI
EYPDFIVIDLDPSDNNTFDEVIETALVVKKILDKGGIDAYCKTSGATGLHIYIPLGAKYT
YEQGKNFAHIIAQLTNNELPELTSLVRNPKERKKQIYVDYLQNRGGQTLAAPYSVRPKPG
ATVSTPLEWKEVKKGLHPSTFTIKTIFKRLEKKGDLFKGVLGKGIDMEKCLKKLGA
NT seq 2691 nt NT seq  +upstreamnt  +downstreamnt
atggcgctggaaacctataaagagaaacgtaatttcaaacatacacctgaaccggtagca
aaaaaaaatgcagcaggtacggaattgaaatttgtgatacagcggcatgccgcttcacat
ctgcattatgatttcaggcttgaaatggaaggtgtattaaaaagctgggccgttccgaaa
ggtccttcattaaacccttcagacaaaagactggcgatgatggtagaggatcatcccttt
gcataccgtacatttcatggcgtaattccggaaggaaattatggtgccggtattgtagag
atctgggatgaaggcacgtatcatgccatcggaaatgaagatcgtaaaaccggtgaaaaa
gaattattggccgatcttaaaaaaggaaacctgaaatttgtactgcatggtaaaaaactc
aaaggtgaatttgccctggttaaaataaaaaataataattcatccaaagacaatgcctgg
ctgctgatcaaacacaaagatgcgtatgcaacagaagatgcttacagcagcgaagattat
gttccggcaaattctaaaattgtaaaaaaaacggctgcttctaaaaaaccggcaacacct
gtttcaaaaaaatcggctattaaaatggtagatgataaacctgcaacagataaaaaaaaa
gtacagtccgctccggcacaaaaaataaaacaaggtaaagacccgatgccgcatgaggtg
aaacccatgctggcaaaattaaaagacgcaccatttgattcaccggaatggatttttgaa
atcaagtgggatggctatcgggccattgcagaaattgatcagggtaaggtagaattgtat
tccagaaatctgatttcctttactaagaaatataaaccaattgttgagtcacttcagtca
ttcggacacaatgttgtgctggatggagaggttattgtattaaatgcagacggcacatca
agtttccagatgctgcagcagtacgatgaaactccaagtccggatctatgttactgtgtt
tttgatattctgtttctggatggccgggacctgcgggatttacccttgcttgagcgcaaa
gcaatacttaaaaaggtaatacctgatcttcccaatctgaaatatagtgaccacgttgaa
aaggaaggcatccgtttttttgaacttgcaaagaaaaataaactggaagggatcatggct
aaaagagccgatagtatttaccgccttggctcaaggtctgaccaatggatcaaacttaaa
atcgtaaaatcacaggaagcaattatctgtggttttacggccccgagaaactcacggaaa
gattttggcgcattgattttgggtgcctatgaaaatggacgactggtatatatcggccat
acgggcggaggctttacaatggcgttactggcttccacattaaaattgatgaaaccgctg
attcagaaagaatctccgtttgatgtgaaaataaaaacaaatgaaaaagtaacctggata
aaacctaagctggtatgtgcaattgctttttcagaatggacaagcgatggacatatgcgg
caaccaatttttcagggtatgcgcattgataaaaaagtcagtgaagtgacacgggaattg
cctacggttataaacgtaccacaagacaatgctatggaagtaacgcgtaacataaaacaa
acagcggcaaaaacaagcacgaaaaaaacggctcataaaaaagcagcctcaaaaaaaaca
accactaataaaaagacaacggatgttgcagctgctgaaaattcaaaggccggcgaattt
aaaatcgatggacaggttttaaaaatttcaaaccgttcaaaagtttattggccggaagat
ggttatacaaaaggcgacctgattgattattatatgcaggcagcagattatatactgcct
tatttaaaagatcgtccggagtcgttaaaccggcatccgaatggaattgacggctcaagc
ttttttcaaaaagatatgggagacacattgccggactggatcgaagctaaagaaattttt
tctgaatcaaacagcaaggatattaactacgtgctatgccagaataaagcaacattgatt
tacatggcaaatcttggctgtattgaaatcaatccgtggaactcacgtgttaaaaaaatt
gagtatccggattttattgtgattgatcttgacccaagtgataacaatacgtttgatgaa
gttattgagactgcgttagtagttaaaaagattctggataaaggagggatagatgcgtat
tgtaaaacatctggggctaccggactgcatatttatattccgttgggcgcaaaatatacg
tatgaacagggaaagaattttgcacatattatcgcgcagcttaccaataatgaattgccg
gaactaaccagtctggtacggaatccgaaagaacgcaaaaagcagatttatgtagattat
ttgcagaaccgcggcggacaaacacttgctgcgccttacagtgtaaggcctaagcctggg
gcgaccgtttcaacaccgctggaatggaaggaagttaaaaaaggattacatccatccaca
tttaccattaaaactattttcaaacgtctggagaaaaaaggagatttgtttaaaggtgta
ttaggaaaaggtattgatatggagaaatgtttgaaaaaactgggggcgtag

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