KEGG   Capra hircus (goat): 102183307Help
Entry
102183307         CDS       T02910                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
chx  Capra hircus (goat)
Pathway
Alcoholism
Human papillomavirus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:chx00001]
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    102183307 (HDAC6)
  Substance dependence
   05034 Alcoholism
    102183307 (HDAC6)
  Infectious diseases
   05165 Human papillomavirus infection
    102183307 (HDAC6)
Enzymes [BR:chx01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102183307 (HDAC6)
Protein phosphatases and associated proteins [BR:chx01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102183307 (HDAC6)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     102183307 (HDAC6)
Membrane trafficking [BR:chx04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    102183307 (HDAC6)
Chromosome [BR:chx03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102183307 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1129 aa AA seqDB search
MTSTGQDSTTPKERRSRHNPHSPTHDSSITSKRGIKKGAMLRSSPSLAEVKKKGRMKKLS
QTAEQDLIMGLQGLNLNLEARTLSGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQG
QGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSA
QVSLSCALEALEPFWESLVRSVESLEEKDTVEKDDVEEKEEEKLPQSSELSVPIWPVLQA
RTGLVYDQRMMEHYNLWDNYHPEMPQRIHCIMHHLDELGLAKRCQSLPTRPATDAELLTC
HSAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVL
NGIAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHI
FEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAAW
HRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGHIILILE
GGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQDSITKTIQVHRRYWRSLRVMKR
KNIEGLSSSKLITKKPSQPASSELANVTTTVEGNILGAGMGQAASEASVKESTPDQTESA
TAPVELTQGQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIPPALPVQGAAAQ
TSPSKLTANLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFGDHADTDQVMFYA
VRPLLWCPHLAAVCPIPETGLNVTQPCQDCGTLQENWVCLSCYQIYCGRYINAHMLQHHE
GSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHRNKFGEDIPHSD
NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggtcaggattccaccacacccaaggagcgaaggagtaggcacaatccc
cactcccccacccatgactccagcatcacctcgaagcgaggtattaaaaagggtgccatg
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagc
caaacagccgagcaagacctcatcatggggctgcaagggctgaatctgaacctggaggcc
aggacactgtctggcactggtttggtgttcgatgaacagctaaatgaattccactgcctc
tgggatgacagcttcccggaacgcccagagcggctccatgccatcaaggagcaactgatc
caggagggcctcctggaccgctgcgtgtcctttcaggcccgattcgccgaaaaggaggag
ctgatgttggttcacagcctagaatatattgatctgatggaaacgacccagtacatgaac
gagggggagctccacgtcctagcagatacctatgactcagtttatctgcatccgaactca
tacacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggag
gctgagatccggaatggcatggccatcatcaggcctcctggacaccatgcccagcacagt
ctcatggatggatattgcatgttcaaccacgtggccgtggctgcccgttatgctcaacag
aagcacgatattcagagggtccttatcgtggattgggatgtgcaccatggtcagggaata
cagttcgcctttgaccaagatcctagtgtcctctatttctccatccaccgctatgagcaa
ggtcggttctggccccatcttaaggcctctaattggtccaccacaggtttaggccaaggc
cagggatacaccatcaacgtgccttggaaccaggtggggatgcaagatgctgactacatc
gccgctttccttcacgtcctcctgccagttgcatttgagttccagccccagctggtcctg
gtagccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactcca
gcagggttcgcccagctcacccatctgctcatgggtctggcagaaggcaagctgatcctc
tcactggagggtggctataatctccgctctctggctgaaggtgtcagcgcctccctccac
acccttctgggtgacccttgtcctatgttagagtctcctggtgccccctgcccgagtgcc
caggtgtcactctcctgtgctctagaagccctggaacccttctgggagagccttgtgaga
tcagttgagagcctggaagaaaaggacactgtggagaaggatgatgtggaagagaaggag
gaagagaaactgccacagtcctctgagctctccgttccgatatggccggtgctgcaggct
cgcacggggttggtctatgaccagcggatgatggagcactacaacttgtgggataactac
caccctgagatgccccagcgcatccactgtatcatgcatcacctggacgaactgggcctt
gccaagcgctgccagtccctgcccacaaggcccgctacagatgctgagctgctcacctgc
cacagtgctgagcacttggaacgtctgcgggccacagagaagatgaagacccgggagctg
cgccgtgagggtgccaactatgactccatctacatctgctccagcacttttgcctgcgca
cagctggctgcaggcgccgcctgtcgcctggtggaggcagtactggcaggagaggttttg
aatggcattgctgtagtgcgacctcctggccaccatgcagagccggatgcagcttgtggt
ttctgtttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcat
gcactgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacata
tttgaggaggaccccagtgtgctgtacatttccctgcaccgctatgatcatggtaccttc
tttcccatggggaatgagggtgcctgtacccggataggtaaagctacaggcacaggattc
actgtcaatgtggcctggaatgggccccgcatgggtgatgctgactacctggctgcctgg
caccgtctggtgcttcccattgcttatgagtttaacccagaactggtgctggtctcagct
ggcttcgacgctgctcggggggatcctctgggtggctgccaggtgtcgcctgagggctat
gcccacctcacccacctgctgatgggcttggccaatggccatatcatcctaatcctagag
ggtggctataacctgacgtccatctcagagtccatggctgcctgcactcgttccctcctt
ggggatccactgcccctgctgacccggctgcggcccccactatctggagcccaggattct
atcacgaaaaccatccaagtccatcgaagatactggcgcagtttgcgggtcatgaagcgc
aaaaacatagagggactgtccagttctaagttgatcaccaagaagccatcccaaccagcc
agttctgagctagccaatgtgacgaccacagtggaagggaacatcctgggggcaggcatg
ggacaggccgcctcagaagcatctgtgaaagagtccactccagatcagactgagtcagcg
acagctccagtagaacttactcagggccagtcctcagacacagccacacaaggagctgca
ctggaccagaccatctcagagggggccacaggaggagctgagctgatccaaaacccgcca
gcctcatgcatcaacaacaggattcctcctgccttacccgtgcaaggagccgcagcccag
acatcccctagtaagctgacggcaaacctcagaatattggacctagatagcacgactcag
gagccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacgaatgag
tcagtgccagtgcaggtctttggagatcatgctgacactgaccaggtcatgttttatgct
gtgagaccactgctttggtgtcctcatttggcggcagtatgccccatacctgagacaggg
ctgaatgtgacccaaccttgtcaggactgtggaacactccaagagaactgggtgtgtctg
tcttgctatcagatctactgcggtcgttacatcaacgctcatatgctccaacaccatgaa
ggttcgggacacccactagtactcagctatgccgacctgtctgcctggtgttaccactgt
caggcctacgtccaccacaaggatctcctagcagtgaagaacatcgcccaccggaacaag
tttggggaagacataccccattcagactaa

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