Carboxydothermus hydrogenoformans: CHY_2036
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Entry
CHY_2036 CDS
T00287
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy03030
DNA replication
chy03430
Mismatch repair
chy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHY_2036
03430 Mismatch repair
CHY_2036
03440 Homologous recombination
CHY_2036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chy03032
]
CHY_2036
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_2036
Enzymes [BR:
chy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHY_2036
DNA replication proteins [BR:
chy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHY_2036
DNA repair and recombination proteins [BR:
chy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHY_2036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
VQ
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
ABB15652
UniProt:
Q3AAH9
LinkDB
All DBs
Position
1822887..1823555
Genome browser
AA seq
222 aa
AA seq
DB search
MIKSLKKFLEQNKNPLRTKIETINAFYPYDIPLLNLTYTVIDLETTGLKPFQGDEIIAIG
AVKIINGNITRPAFHAYVNPQREIPEVVQRLTGISPKTVQNAPPLTNTLTTLLDFARNSV
IVGHSVNFDLAFLNKHLSSLTGKKLTPRLLDTVDLGIYLFPREPNYSLENFAQKFAISLQ
GRHTALGDAVICAKVFLNFLKILELKNINTWWQLSQEIYKVL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatctttaaaaaaatttttagaacaaaataaaaacccgcttcgcactaaaatt
gaaacgataaatgccttttatccttacgacattccgcttttaaatttaacctatacggta
attgacctggaaaccaccggcttaaaaccctttcagggggacgaaattatcgcgattggt
gcggtaaaaattattaacggcaacatcacccgtccagcctttcatgcttatgtcaacccc
cagcgggaaataccagaagtagtccaaagattaaccggaattagtccaaaaacggtgcaa
aacgctcctccccttactaataccctgacaactttattagattttgccagaaactcggtt
atcgttgggcattcggtaaattttgacctggcttttttaaataaacatctaagttcctta
accggaaaaaaactaaccccccgtctcctggataccgtggatttaggaatatatctcttc
ccccgggagccaaactattctttagaaaattttgcccaaaaatttgccataagcctccag
ggaagacacacagccctgggagatgcggtaatttgcgctaaagtttttctgaatttttta
aaaatacttgagttaaaaaatataaatacttggtggcaactttcacaagagatatataaa
gtcctataa
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