Citrus x clementina (clementine): CICLE_v10020284mg
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Entry
CICLE_v10020284mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10020284mg
03015 mRNA surveillance pathway
CICLE_v10020284mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10020284mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CICLE_v10020284mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18046471
NCBI-ProteinID:
XP_006441048
UniProt:
V4T285
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MANPPRGRRSPPSRSASGSSSRSRSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPS
RSANSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNV
NEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGAQIDGNVV
HATFTLSLVKKVSPPPKPVAASSKRDSSRTDNVSADIEKDGPKRPREPSPRRKPPPSPRR
RSPGPRRGGSPRRPPDSPPRRRIESPIRRRLESPYRRGETPPRRRPASSPRGRSPSPPPR
RHRSPARMRGSPIRRRSPLPPRRRSPPPRRARSPPRKSPLRRRTRSPIRRPLHSRSRSLS
PRRGRGPPPRRGRSSSYSSSPSPRRVPRRISRSRSPKRPLRGRSTSNSSSSSSPPRKP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatccaccgcggggccgacgctcgccaccgtcgaggtccgcttccggatcatca
tcccggtcccgttcacgctcctactccggttcagactcccggtccagctcccgttctctc
tcctcccgctctagatccctttctcgctcgcgctctttatcttcctcttcttctccttct
cgtagcgccaactctcgcagccgcagccccccacctcaacgcaataagagtcctgctgtg
gcagccaggcgaggtcgctccccagctcctccatctaaaagagcttcttcacccccaagg
aaagcttccacagaaaatgattctcttgttctctacattgactcactcagcaggaatgtg
aatgaaggccatttgagagaaatattcagtaactttggtgaagttgtggatgtcgagttg
gttatggaccgcgctgttaatcttccaagaggaagtggatatgttcgtttcaagacaagg
gcagatgctgaaaaggcacaattatacatggatggtgcccaaattgatgggaatgttgtt
catgcaacattcacattgtctttggtgaaaaaagtttcaccgcctccaaagcctgttgca
gcttcttcaaagagagatagttcgagaactgataatgtcagtgctgatattgagaaggat
gggccaaaacgaccaagagaaccctctccccgtcggaagccacccccctcgccacggagg
agatctcctggacctagaagaggtggatctccgagacgaccaccagattctcctccacgt
agacgcatcgagtctcccattcgtcgtcgattggaatctccttatcgccgaggtgagacc
cctccgaggcggagacctgcttcttcacctaggggtcgctctccctcccctccacctagg
cggcatagatctcctgcaagaatgcgtggtagtcctatccgacggcgttctcctcttcct
ccaaggcgccgttcgcctccccctagacgagcccgttctcctcctagaaagtctccactc
cgtagacgcactcgctctccaattcgcaggcctttgcactctcgttcaagatctctttca
ccaaggagagggcgagggccacctcccagacgtgggcgatcatcatcctactcttcatca
cctagtccgcgcagggtacctcgaaggatatcaaggagtcgtagtcctaaaaggcctttg
agaggaagaagcactagcaacagcagcagcagcagttccccacctcgtaagccatag
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