Citrus x clementina (clementine): CICLE_v10020348mg
Help
Entry
CICLE_v10020348mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12817
pre-mRNA-splicing factor 18
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10020348mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10020348mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
Step II factors
CICLE_v10020348mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp18
PRP4
DGF-1_C
Peptidase_S64
FAM199X
Miga
Motif
Other DBs
NCBI-GeneID:
18046880
NCBI-ProteinID:
XP_006444054
UniProt:
V4VVI7
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MDLLKQELLRKRQGLAEETGGRRVFKRSEIEQKQIQKLREQEKREQEAKLLRQNNSHNST
ASSANSNSVSSARTTTATTASGASATATKTLTNEQNIDNLNLPKQEVIRRLRLLKQPITL
FGEDDDARLERLKYVLKAGLFEVDSDMTEGQTNDFLRDIVELRKRQKTGILSERKRKDRE
EGGGEDGEGGGGDEELSADGGSSGVDMDKDLKRMKANFDELCEEDKILVFFKRLLNEWNQ
ELNEMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALMLMVNCCMKRD
YLAAMDHYIRLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRL
MTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEETISGSNQSSEERLRLMPAPKES
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctcaaacaagaattgctcaggaaacgccagggtctagccgaagaaactgga
gggaggcgagtcttcaagcgctctgagatcgagcagaaacaaatccaaaagctacgggaa
caagaaaaacgagaacaggaagccaaactcctccggcaaaataactcccacaattcaacc
gcgtcttccgccaattcgaactctgtatcatccgccagaaccaccaccgcaaccaccgcc
tccggcgccagcgctaccgcaaccaaaaccctaaccaacgagcagaacattgacaattta
aacctcccaaagcaagaagtcatccgaaggctacgtttactaaaacaaccgatcactctc
tttggcgaagatgacgatgctcggcttgagcggcttaaatacgtcttaaaggcggggctc
ttcgaggtggacagtgatatgaccgaaggtcaaactaatgattttctccgcgatattgtg
gagttgaggaagcggcagaagacgggaattttgagcgagaggaagaggaaagatcgggaa
gagggcggaggagaggatggagaagggggcggtggagatgaggagctgagcgccgatggg
gggtccagtggcgttgatatggataaggatttgaagagaatgaaggccaattttgatgaa
ttgtgtgaggaagataagattctggttttttttaagaggttattgaatgaatggaatcag
gaattgaatgagatgccggaagctgagaaaaggacggcaaaagggaagtctatggtggct
acttttaagcagtgtgcaagatacttgaatccgctgttcaagttttgcaggaagaaggtt
cttcctgatgacattcgtcaagcattgatgttgatggttaactgctgcatgaagcgagac
tacttagctgctatggaccattatattaggttggccattggtaatgcaccatggcctatt
ggtgtcactatggttggtatccatgaacgttcagcccgtgagaagatttataccaacagt
gtggcccatattatgaatgatgagacgactcgcaagtacctgcaatcagttaagagattg
atgaccttttgccaacgacgctatccaacaatgccctccaaagcagttgaattcaacagc
ctggcaaatggcagcgacttacagtctctactagcagaagagacgatatctggtagtaat
caatcctcagaggaaaggcttcggttaatgcctgcaccaaaagagagctag
DBGET
integrated database retrieval system
