KEGG   Coccidioides immitis: CIMG_01894
Entry
CIMG_01894        CDS       T01114                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cim  Coccidioides immitis
Pathway
cim03030  DNA replication
cim03410  Base excision repair
cim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CIMG_01894
   03410 Base excision repair
    CIMG_01894
   03420 Nucleotide excision repair
    CIMG_01894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cim03032]
    CIMG_01894
   03400 DNA repair and recombination proteins [BR:cim03400]
    CIMG_01894
Enzymes [BR:cim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CIMG_01894
DNA replication proteins [BR:cim03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    CIMG_01894
DNA repair and recombination proteins [BR:cim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      CIMG_01894
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 LRV_FeS
Other DBs
NCBI-GeneID: 4565755
NCBI-ProteinID: XP_001248123
UniProt: J3KK66
LinkDB
AA seq 2223 aa
MSRRPSKYGSKFRSAAASFRPKRAKTVEFSALRTSEATSQDEKFQALRLANSIDESMGFP
RFESGKKRIGWLCNMHSTTIDDPKVPGGRAGVEFYFLEDDGGSFKATVEYDPYFLIAAKR
GYEMEVEEWCRRKFEGLVKSTKQLEKEDLQMPNHLLGNKRKFLQLSFANVNDLLAVRKVI
LPIAEKNKKNVNAMDTYAEIASASAGFDMFDDEMADKTKNAYLEASEFIVDIREYDVPYH
VRVSIDKDIRIGKWYTVDATHGAVSLTCIEERLQRADPVVLAFDIETTKLPLKFPDPVID
QIMMISYMIDGQGYLITNREIVSEDISNFEYTPKPEYQGPFTIFNEPSEKSTIERFFQHV
KEAKPTVIATYNGDYFDWSFVEARASVQGIDMYREIGFRKNSEDIYQSDYCVHMDCFAWV
NRDSYLPQGSRGLKAVTVAKLGYDPDELDPEVMTRYASERPQTLAEYSVSDAVATYYLYM
KYIHPFIFSLCTIIPLNPDDVLRKGTGTLCEMLLMVQAYKNNIILPNKHKDPIEAFWDGH
LLDSETYVGGHVESIEAGVFRSDIPVNFSIDTTAIDELLRDLDAALTFSITVEEKKSLDD
ITNYDDVKAQISDRLMNLKNTPNRHERPSIYHLDVASMYPNIMTTNRLQPDSMIKESDCA
VCDFNRPGKTCDRRLPWAWRGEFLPAKRDEYNMIRRAVANEKFPGKTRDSPLRSFDDLSE
SDQAKLVKSRLQEYCKKIYHKIHDSKTIEREAIICQRENPFYVDTVRNFRDRRYDFKGQQ
KVWKGKVDSLKGSGATAPEIEEAKKMVVLFDSLQLAHKVILNSFYGYVMRKGSRWYSMEM
AGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPATFPENFAFTLKNGKKIAISYP
CVMLNHLVHGRFTNHQYQTLVDPTTFRYETHSDNSIFFEVDGPYKAMILPTSKEEDKNLK
KRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQIFKFFLEGTTLQETYSAVAEVANRW
LDVLHLHGSTLADEELIDLICENRSMTKTLEEYGSQKSTSITTARRLAEFLGDQMVKDKG
LNCKYIISAAPKGSSITERAVPVAIFSAEPNVKRFFLRRWLKEDPGDMDPRSIIDWEYYL
ERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRIDIKDDKFKQKKMTDLFDKTPLSS
VSTNIMDHRLPTAGDIEDAMSTQKLKTQISTQMSQKRKAPESSQSTDPFASLPAKMPSMN
EDYEGWLKYQKQKWKIQKHARLRRRKLFGERTNVATDALSNFFRNQAELTYVSTWQILQF
RETDIPGEIRAFVLIDRKVHAITVKVPRQLFINFRDDQLPDVDIEGCTVQKVNHALPNGH
PSVHLFQLTMPEFTYVKDVATISALLDHPSVEGVYESKVPLDIRTVLKLGTLCTFDESQR
GVLGKGLEHGFELSTLLKAAPTQTYLADSQFEFVFVYHIVSGDRQIFSVFSTRRDEAHIV
IFSKQRDGQGFPNVDKIYANSLRRRIEEGNNENWQQVFEYQHALHFRTMQVTAKRKAHLE
VGDLLRKFRNESSYPTLVVLQSPHKQQLLHEVSAFKDFPVLSLRSDPSDNELPRLGWQPF
VAKQIVMHYLALDSWINHLIEFARYGDIPLCNLERDDPKFLIDIAYARRLEQNNVVLWWS
PNPLPDHAGYEKDNINSLIQKVDMPTINNPGAYSSVCIDLDVRNLAINTILTSSLINDLE
GSESVLLNPSAPTGQEVSDGTGVLYSDTAFSSAGIVVLRDMVKAWWAEACQGKVMADVMV
QHLIRWVESPDCNLYDRALHQYVQMMSKKALQQLMGDFRRVGSSVIFASPNRLLLQTTKT
EVGNAYAYSQYILKSIKSKPLFNFLDLEIKEYWEYLLWYDEFNYGGKACHEVVESNSQEL
ETIMHWQMAGFLPSPLQPVFNDWVVEYIEIMHGLKKSNKSLDSDESRPTQIQFKSMAETE
GIDVTNVLSESYSKALKRQIVGLIRRQRDEMLHPELVSDYDFPALPGAFWHDTKRERNPT
LELVKYLTHVLSLSKHTSLEVRILRRELLALFDIKEFSDAGKFENPSASLKLPQLICNHC
TMSRDLDLCRDGDLLPEEGGSAASKAWCCLYCGTEYDRLALEERMISEVQGIVVEWQTQD
LKCEKCGGLMVNPLMEHCSCGGRWTTMLDRRAAERKVRIFKSVAEFYGLKMLTIVTNGVL
DGL
NT seq 6672 nt   +upstreamnt  +downstreamnt
atgtcgcgccgacccagtaaatatgggtcgaaattcaggtctgctgcggcttcattcagg
ccgaagcgcgccaaaacggttgaattctcggcccttcggaccagcgaggcgacctcccag
gatgagaaatttcaggcgctacggctggccaacagcatcgacgagtcgatgggatttccg
cgcttcgaatcgggaaagaagagaattgggtggctctgcaatatgcatagtaccacgatt
gacgatccaaaggtgcctggtgggagagcaggtgtagagttttattttttggaagacgac
ggcggcagtttcaaggccacggttgaatatgacccctatttccttatcgcggcgaaacgg
ggctatgaaatggaggtggaggagtggtgccgaaggaagttcgaaggtttggtgaagagt
acgaagcagcttgaaaaggaggatttacagatgccgaatcacctgcttggaaataagaga
aagttcttgcagctgagctttgcaaacgtcaatgatcttcttgctgtccgaaaagttatc
ctcccaatcgcagagaaaaataagaagaatgtgaatgccatggatacttatgcagaaatt
gctagtgcaagtgctggctttgacatgttcgatgacgaaatggccgacaagacgaaaaat
gcatatctcgaagcaagcgaatttattgtggatattcgagaatacgatgttccataccat
gtgcgcgtatcgattgataaggatattcgaattgggaaatggtacactgtagatgccacc
cacggagctgtctccttgacttgcatcgaggaaagattacagcgagcggatcccgttgtc
cttgcttttgatattgagaccacgaaacttccactgaaattccctgaccctgtcattgac
caaataatgatgatatcttatatgatcgatggtcaaggatacctgattaccaatagagag
attgtctctgaagatatcagtaatttcgaatataccccaaaaccagaataccagggcccc
tttacgatatttaatgagccgagcgagaaaagtaccattgagcgtttctttcaacatgtg
aaagaagcaaaaccaacagtgattgcgacttacaacggtgattatttcgattggtcattt
gttgaagctcgagcaagtgttcaggggatcgacatgtatagggaaattggattccgaaag
aacagcgaagatatttatcagagtgactactgtgtccacatggactgctttgcctgggtg
aaccgagacagttacttgccgcagggaagtagaggcttaaaggccgttactgtggcaaaa
cttggttatgaccccgatgaactcgatccagaagttatgacgagatatgcgagtgagcgg
ccccagactctggctgaatactcagtctcagatgccgtggcgacctactacctgtacatg
aagtacattcatccttttatcttttctctatgcacgatcatacctctcaaccccgacgat
gttttgcgtaagggtactggtaccctttgcgaaatgcttctcatggttcaagcctataaa
aacaatatcatattgcccaacaaacataaggatccaatagaagcattctgggatggtcat
ctcctagattcggaaacgtacgtgggtggacacgtcgaaagcatcgaagcaggagtcttt
cgcagcgatattccggtcaacttctcgatagatacgactgccatcgacgaattgcttcgt
gatcttgatgccgccctaaccttcagcattacggtggaagaaaagaaatctctagacgac
ataacgaattatgatgacgtgaaagcgcaaatatctgacagacttatgaacctgaaaaat
actcctaatagacacgaaagaccgtctatttaccatttagacgttgcatcgatgtatcct
aatattatgaccactaatcgattacagccagactcgatgatcaaagaatctgactgtgca
gtttgcgacttcaatcgacctgggaaaacctgcgacaggcgccttccatgggcgtggaga
ggcgaatttcttccagccaaacgagacgagtacaatatgattcggcgagctgttgccaat
gagaagttccctggaaagacgcgggacagtcctctgcggagctttgatgaccttagcgag
tccgaccaggcaaaacttgtcaagtctcgactccaagaatactgcaagaaaatttaccat
aagatccatgacagcaaaacaatcgaacgtgaggcaattatttgtcagagggagaatcca
ttctacgttgacaccgtccgcaatttccgtgaccgccgttacgatttcaagggacaacag
aaagtgtggaaaggcaaagtcgatagtttaaaaggatcaggtgcgactgcgcctgaaatt
gaggaggccaagaagatggttgttctcttcgattcgcttcagcttgcccacaaagttatc
ttgaatagtttctacggatatgttatgcgaaaaggatcacgctggtattccatggaaatg
gcgggtgtaacctgtcttactggtgctcatatcattcagatggccagggaactcgtggag
agaattgggcgtcccctagaattagataccgatggtatatggtgtatgcttccggctaca
tttcctgagaatttcgcatttactctgaaaaacggcaagaaaatcgcgatttcatatcct
tgcgtcatgctcaaccatctcgtccatggacgcttcacaaaccatcaataccagactctc
gtcgatcctactactttccgctatgagacacacagcgataactccatcttctttgaggtt
gacggtccatacaaggccatgatcttgccgacttccaaagaagaagacaaaaatctcaag
aagagatacgctgttttcaaccacgatggttcgctagcggaacttaagggcttcgaagtc
aaacgaaggggagagctgaaactgatcaagattttccaaactcagatattcaagtttttc
ctcgaaggaaccacgctgcaggagacttattctgcagtggctgaagttgcgaaccgatgg
cttgacgtccttcatctgcatggatctacattagcggacgaagagttgattgatttaatt
tgtgaaaatcgaagcatgaccaagactcttgaagaatacggtagccagaaatcaacatca
atcactacagccaggagattggcagaatttctgggagatcagatggttaaggacaaaggt
ctaaattgcaagtatattatatctgcggctccaaagggctcctcaattaccgaacgagcc
gttcccgttgcgattttctccgcagagccgaatgtaaaacggttcttcttgcgcagatgg
ttgaaagaagaccctggcgacatggatccgcgcagcataatcgattgggaatattatctg
gagcgattaggttccgtgattcaaaaattgatcacaattccagcggccctgcagaaggtc
cgcaatcctgtcccaagagttccccacccagactggctccaaagacggatagatatcaag
gatgataaattcaaacagaagaagatgaccgacctgtttgataagactcccctttctagt
gtgtcgacgaatataatggatcaccgccttccaaccgctggagatatcgaagatgctatg
tccactcagaagctcaagacacaaataagcacgcagatgtcgcaaaagaggaaagcacca
gaatcttcacagtccacagacccttttgcaagtttgccagccaagatgccatcgatgaac
gaagactatgaaggctggctgaagtatcagaaacagaagtggaagatccaaaagcatgct
cgtcttcgacgacggaagttattcggtgaacgtacaaacgttgctactgacgccctcagc
aactttttcagaaaccaggctgagctgacatatgttagcacgtggcagattctgcagttc
agagagacagatattccgggagagatacgggcgttcgtgctcattgataggaaggtccac
gccattaccgttaaagtaccacggcagctttttatcaactttagggatgatcaactcccc
gatgtcgacatagaaggatgcacagtccagaaggtcaaccatgccctaccgaacggccat
ccttcagtgcatttattccaattgacaatgcccgagtttacgtatgtgaaagatgtagca
acaatttctgcacttttagaccatcctagcgtcgaaggtgtctatgagtccaaggttccc
ctggatatccggactgttcttaagcttggtacgctatgtactttcgatgagagccagcgc
ggagtgttgggaaaggggttggaacatggttttgagttgtccaccttgctaaaagctgct
ccaacccaaacataccttgctgactcccagttcgaattcgtgttcgtttatcatattgta
tcaggggaccgccagatattctctgtcttctcaacacgaagggacgaagcccatatcgtc
atattctcaaaacaacgagatggacaaggttttccgaatgttgacaaaatatatgctaac
tctttgcgtcgtcggatcgaagaaggcaacaatgaaaactggcagcaggttttcgaatac
cagcatgcattgcattttaggacaatgcaagtgacggccaaacgcaaggcacaccttgag
gtcggcgatcttcttagaaaatttcgaaatgagagctcgtaccccactctggtcgtcctt
cagtcgcctcacaaacaacagttactccacgaggtctctgcttttaaggattttccagtt
ctgtctttgagatccgatccatcagataatgagttgccccgactgggctggcagccgttt
gtcgcaaaacaaatcgtcatgcactacttagccttggattcgtggatcaaccatttgatt
gaattcgcgagatatggagacattccgctttgcaatctcgaacgggatgacccgaaattt
ttgattgatattgcgtacgccagacggttagagcaaaataacgttgtcttgtggtggtca
cccaatccgctccctgaccatgctggttacgagaaagataacatcaatagcctcatacaa
aaggtagacatgccgacgatcaacaatcccggcgcatattcgtccgtatgcattgatctc
gacgttcgaaacctcgccataaatacaatccttacttcatcgcttatcaatgaccttgaa
ggaagcgaatcggttctgcttaacccttcagccccaactggccaggaagtatcggacggc
accggggtgctctactcggacacagcattctcctcggccggtattgttgttctccgagac
atggtgaaagcttggtgggcagaagcctgtcagggcaaggtcatggcagatgtcatggtg
cagcacctgatccgatgggttgagagtccagattgtaacctttacgatcgtgcgttacat
caatatgtgcagatgatgtccaaaaaagcattacaacagctcatgggtgatttccggcgg
gttggctcgagcgtgattttcgcgagcccaaatcgcctattattgcaaactacgaagacg
gaggtcgggaatgcatatgcatacagccaatatattctcaaatctattaaatcaaagcca
ctgttcaatttcttggatcttgagataaaagagtattgggagtatttactatggtacgac
gaattcaactatggcgggaaagcatgccacgaagtcgtcgaatcaaacagccaggaactc
gagacgattatgcattggcagatggctggatttcttccaagtcctttgcagccagtgttc
aatgactgggtcgtggaatatattgaaattatgcacggcttgaaaaagtctaacaagtcc
ttggattcagatgaatcaaggccaacgcagattcagttcaagtcaatggcggagactgag
ggtatagacgtcactaatgtcctctctgaatcttactccaaagctcttaagcggcagatc
gtcgggctaatccgacgacaacgtgatgagatgcttcatcctgaactggtatcggattac
gacttccccgccctccctggggcattctggcacgataccaagcgcgaaaggaacccgact
ttagaactagtcaagtatctcacgcacgttcttagcttgtcaaagcatacgtctctggaa
gttcgaattctccgacgcgagctcttagcactgttcgatatcaaagagttcagcgacgca
ggcaaattcgagaacccaagcgccagcctcaaactcccgcagctgatatgtaaccactgc
acaatgtccagggacctagacctctgccgtgatggggatctcctccccgaagaaggtggt
tctgctgcaagtaaagcatggtgctgtctctactgcggcaccgagtacgatcgcctcgct
ctcgaagagagaatgataagcgaagtacaaggtattgttgtggaatggcagacacaggat
ctgaagtgcgagaagtgcggaggcctgatggtcaacccgcttatggagcattgctcttgt
ggcggtcgctggacgacgatgcttgatagaagggcggcagagaggaaagtgaggatattt
aaaagcgtggctgagttttatggattgaagatgcttacgattgttacgaatggtgttctg
gatgggctttga

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