KEGG   Ciona intestinalis (yellow sea squirt): 100170018
Entry
100170018         CDS       T01056                                 
Symbol
zf(bbox/ring)-3
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9
  KO
K10649  tripartite motif-containing protein 9/67
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100170018 (zf(bbox/ring)-3)
   04121 Ubiquitin system [BR:cin04121]
    100170018 (zf(bbox/ring)-3)
Membrane trafficking [BR:cin04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    100170018 (zf(bbox/ring)-3)
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100170018 (zf(bbox/ring)-3)
SSDB
Motif
Pfam: SPRY zf-B_box fn3 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_3
Other DBs
NCBI-GeneID: 100170018
NCBI-ProteinID: XP_002121804
Ensembl: ENSCING00000025035
LinkDB
Position
10:complement(60795..75605)
AA seq 858 aa
MEEELQCPVCHCIFNDPVILPCTHNVCFQCANTLIHKSGELKVDLPPAYNIETSFPHHEP
DKVSLLSETVLSDSDSGYSASSASSGTSDTPTPSSSTPTIVTSDPFSSLVPTHTVTQAST
TTTPTGVNLPALPDSISCLTCPICHRASFVDDRGVNGLPRNKAMNSIVGRYTRTIDSSLR
PPTLSPNASPVRKPPISPKKPATPVLRRHTKTVHNCQICEGDPANEASVKCLQCEVLYCA
SCRDRCHPPRGPLARHTLVDVDADKPEPTRRPAYPTLPNKPSLKNGVRLPSCSHHPTEKT
SLYCSSCHLPLCVLCQDEGRHKNHDLKPIGALYKSRKSQLSQQMGSLSSKARQAKDLVMS
LRGMPSEIEKSSTELESKTVTQLDHLMSLLQRKKDELLQKIAKERETKCKIVQDQLQQST
MKLRNTTGLLEYCIEVMKDNDPSAFLQVSQSLTERVSCNEQQWNGRNLISKTKPEFDMDI
VTSPLAMEIENLDFFQMKVPGKPSIRADECGARNNTVTLSWLPAPNSIVDSFRLEMDDGN
NGNYREVYAGKETVCTVDGLHFNSVYRARVRAVNKAGPSPHSDPLQLQTSEVASFQWDPT
QGHCDVRLSNNNCTVTSNSFDDRVVLGSVGFSRGIHYWEFSVDRYEGRPDPSFGVAFYDV
DKSQLLGKESRGWGMYIDESRSWLMHANEHSNRHEVGIKVGSRVGVLLDIARSLLSFYVD
GKPQGNPMTLPTSQGNYHPSGRKQALYFPAISVNRNVEVTLHTGLRSPIQPLQLYRNRMQ
ESSSYSGFSRIQKSPDCPHRGRNLSSSDLRLPSMEAKKFPPPPPIRRGGSTGNMSTRSDG
ESSDSTSAKSLRSFFHKK
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggaggaagaactgcagtgtcctgtatgtcattgtatattcaatgatccagtgatatta
ccttgcacacataacgtatgtttccagtgtgctaatacattgatacacaagtctggtgag
ctgaaagttgatcttccacctgcgtacaacattgaaaccagttttccccaccacgaacca
gacaaagtcagtttattgagtgagactgtcctcagtgattcagatagcggttactcggct
tcgtcagcttcaagtgggacttccgacaccccgacaccctcaagttcgacgcctactatt
gtcaccagcgaccctttcagttcactcgtacccacgcacacagtgacgcaggcttctact
acaacaacaccaaccggtgtgaacttaccggcgttgccagattccatatcttgccttacg
tgtccgatttgccaccgagcgtcgttcgtggacgatagaggagtgaacggacttccacga
aacaaagctatgaactccatagttggaagatacacacgaaccattgacagcagtttacgc
ccaccaactttatctcccaacgcaagcccggttagaaaacctcccatctccccgaagaaa
cctgcgactcccgtattacgcagacacacaaagactgttcataattgtcagatatgcgag
ggcgatccagcgaacgaagcgagcgttaaatgccttcaatgcgaagtcctttactgcgca
tcatgtagagatagatgccatccaccccgtggacccttagcaaggcacacgctagtcgat
gtagacgctgataaaccagaaccaacccgacgccccgcctaccccactttacccaacaaa
ccaagcctcaaaaacggggtccgactcccatcttgctcccaccatcccaccgaaaagacg
agtttatattgttcgtcatgtcatcttcctctgtgtgtcctctgtcaggatgaaggaaga
cataagaaccacgatcttaaaccgattggagcgctttacaaatcccgcaagagtcagcta
agtcaacaaatgggttcgttatcaagtaaggctcgccaagctaaagacctcgtgatgtca
cttagagggatgccatctgagattgagaaatcttccactgaacttgaatcaaagacagtg
acgcaattggatcacttgatgtcgctgttacagcggaagaaagatgaacttcttcagaag
atcgcgaaagaacgcgaaacaaagtgtaaaatcgttcaagaccaacttcaacaatccaca
atgaagttacgaaacacaacaggattgttggaatattgtattgaagtcatgaaggacaac
gacccatctgcttttctacaggtgtcacaaagtttaaccgaacgcgtatcgtgcaacgaa
caacaatggaatggaagaaaccttatttcgaaaaccaaacccgaattcgatatggatatt
gtgacgtcaccattagccatggaaatcgagaaccttgacttcttccaaatgaaagttcca
ggcaaaccaagtatacgagccgacgaatgcggcgcaaggaacaacacagtaacattatct
tggcttcctgctcctaactccatcgttgatagcttcagacttgagatggatgatgggaac
aatggaaattatcgggaggtatacgctggcaaggaaactgtttgtaccgtggacggattg
cattttaacagcgtatacagagccagagtacgagctgtaaataaagctggaccaagtcca
catagcgaccctttgcaactacaaacatcggaagttgcaagcttccaatgggaccctact
caaggtcattgtgacgtcagattatcaaacaataactgcactgtgacgtcaaacagcttc
gacgatcgagtggtgctcggtagcgtcggcttttcaaggggaatacattattgggaattc
tccgtggatcgttatgaaggcaggcccgatccttcgtttggtgtggcgttttatgacgta
gataagagccaattgctaggtaaagagtcacgtggttgggggatgtatattgacgaatcg
aggagttggctcatgcacgctaatgaacattcaaacagacacgaagttggtataaaggtc
ggatcgagggttggcgttttacttgacatcgcaagaagcctgttgtcgttttacgtcgat
ggaaagccccaggggaatcccatgacgctacctacgtcacaggggaattaccatccatca
ggacgaaaacaagcgctgtattttcccgccattagcgtgaatagaaacgtggaggtgact
ctacacacaggattaagatctcccatccaacctcttcaactttaccggaacaggatgcaa
gaatcatcctcttactccgggttctctcgcatccagaagtccccggactgcccacaccga
ggtcggaacctcagctcctctgatcttcgcttgccatccatggaagcaaagaagtttcct
ccccctcctcccattagaagaggaggatcaacagggaacatgagcacgaggagtgatggg
gaatcctccgattcaacatcagctaaatctttgcgatctttcttccataaaaaataa

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