Ciona intestinalis (yellow sea squirt): 100175198
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Entry
100175198 CDS
T01056
Name
(RefSeq) zinc finger CCCH domain-containing protein 10 isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Syntaxin-6_N
zf-CCCH_2
Prefoldin_2
bZIP_1
Cnn_1N
TPR_MLP1_2
DivIC
MbeD_MobD
BLOC1_2
ZapB
bZIP_2
Motif
Other DBs
NCBI-GeneID:
100175198
NCBI-ProteinID:
XP_002124156
Ensembl:
ENSCING00000023541
LinkDB
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Position
4:complement(3232623..3236971)
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AA seq
677 aa
AA seq
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MEEDHKNFDLNDNWPTSTFDKKPICRDFLRNMCHRGRRCKFKHPSTAELEQTVDVSGADI
VYEFCHDFQNSECQRTNCRFIHCTQEEEEAYMKSKMLPLRLKYQYDYGIGDYHIGQEKQR
LEKMTGSAEVAGRPVCRDFLNQECHRGKKCRFLHLDPKKGNDAEANLKRPRMLVEDCEQY
TETCNEYMVVGTQPELPGRQERMPVHNEFMGRNSQVVHQHLEEENHNLKKRVQELEKQVS
DLSATNEVLLEQNAQFRLQKRGITSYRMSSESMPTSFTPSIGLTSPGTVVVTNAARPVPV
QLNVQGQEIITAAGQAPQHAVVAGPGRIQQASVSVPHTTDIAAQVIAANIAANTGGAVET
IPGTNQIVSALSGPIPQQNGMIAQQNMNQMTHPPVASFSAPVQTHNQMASQQPMVTFSQP
MPSHNQMTQHPMVTFSGNMPNHNQMAQQTIVTFSGNMPSHNQLTQQPVSFAGTIMAAALG
GGRCAIQGPNNPIAASLTGAVHQQPSVGSMGPAVPLPQPALVYTVTRSTDNVPVVSTLVS
ATGHEMAIVAEAQQNPSSSMAASLRAVGHAGQAFSNITPGSQPIAQVSSHQNSVLQCTVM
TSGIGGVNTSMPPPVVTMGRSVVQNNLAQTARNVQRGVGPGTTQINEQGMLSYPIAAVQQ
GKMHTSSNFMHRVVDTE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatcacaaaaattttgatctaaacgataactggccaacctcaacttttgat
aagaaaccaatttgcagagattttctgagaaacatgtgtcatcgtggcagacgttgcaaa
tttaaacacccatccactgctgagttggagcaaactgttgatgtatctggtgctgatatt
gtttatgagttttgccatgacttccaaaacagtgagtgccaaagaacaaactgcagattt
attcattgcactcaagaggaggaggaagcttacatgaaatccaagatgcttcctttgcgt
cttaaataccagtatgactatggcattggtgattaccacattggacaggagaaacaaaga
ctggaaaagatgactggatctgcagaggtggcaggacgaccagtgtgtcgtgacttcctc
aaccaagaatgccatagaggcaagaagtgcaggtttttgcatcttgatcccaagaaagga
aatgatgcagaagcaaatttaaaaagacctcgaatgctggtagaagattgtgaacaatat
actgagacatgtaatgagtacatggtggttggaacacaaccagaacttccaggtcggcaa
gagagaatgcctgttcataatgaattcatgggacgaaacagtcaggttgttcatcaacat
cttgaagaagaaaatcataatttgaagaaacgagttcaagagttggaaaagcaagtatca
gatctatcagcaacaaatgaagttttgttagaacaaaatgcacagttcaggttgcagaaa
agaggaattacaagctacagaatgtcatctgaaagtatgccaacctccttcactccttcc
attggtcttacctcccctggtacggtggttgtcaccaacgcagcaagacctgtccctgtg
caactcaatgttcaaggccaagaaattatcactgccgctgggcaagcacctcaacatgca
gtggttgcggggccaggtagaatacaacaggcatcagtttctgttcctcacacaacagat
attgctgctcaagtcattgctgcaaatattgcagcaaacacaggaggtgctgtggaaaca
atacctggcaccaaccaaattgtatcggctctctctggaccaataccacaacaaaatggc
atgattgcccagcagaatatgaaccaaatgacacacccacctgtggcatcattttctgca
ccagttcaaactcacaaccaaatggcatcccagcagccaatggtaacattttcacaaccc
atgccaagccacaaccaaatgacacagcatcctatggtgacgttttcaggcaacatgccc
aatcacaaccaaatggctcagcaaacaattgtgactttttctggaaatatgccaagtcac
aatcaattaactcaacaacctgtcagctttgcaggcaccataatggccgctgccctgggt
ggtggtaggtgtgccatacaaggccctaacaaccctatagctgctagtttgactggtgct
gtgcatcaacaaccctctgtagggtccatggggccagctgtacctctaccccaaccagca
ttggtttatacagttaccagatcaactgacaatgtgcctgtagtgagcacgcttgtatct
gcaactggccatgagatggcaattgtggcagaagcccaacaaaatccaagcagtagcatg
gctgcatccttacgggctgttggacatgctggtcaagcatttagtaatattacacctggg
tctcagccaattgcacaagtgtcttcccaccaaaattcagttttacaatgtacagttatg
acgtcaggcattggtggagtgaatacttcgatgccgcctccagtagttaccatgggaaga
tcagtggtgcaaaacaatctggcacaaactgctcgtaatgtacaacgtggtgttggacct
ggtacaacgcagataaatgaacaaggaatgcttagttaccccatagctgctgtgcagcag
ggtaaaatgcacaccagcagcaatttcatgcacagagttgttgacacggaatga
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integrated database retrieval system
