Ciona intestinalis (yellow sea squirt): 100175557
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Entry
100175557 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100175557
KO
K13878
bestrophin-1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100175557
Transporters [BR:
cin02000
]
Other transporters
Pores ion channels [TC:
1
]
100175557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bestrophin
RE_HaeIII
GSK-3_bind
Motif
Other DBs
NCBI-GeneID:
100175557
NCBI-ProteinID:
XP_002130457
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All DBs
Position
2:complement(6790455..6798264)
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AA seq
1182 aa
AA seq
DB search
MTVTYTHEVANARLSGFSSLLVRWKGSVYKLFYKEFLIFITLYTILTVVYRALLHGESKV
YFEKLCLQFQSYTDLIPISFVLGFYVTLIVGRWWSQLEHLPFPDSIMLLIGANVHGNDDR
GQVTRRTLMRYINMAQVLMYRCVSTAVYKRFPTMEHVVAAGIMTKSEHSVYENVKTENLK
YWVPFMWFTNLLSKLRQEGRIYDDMTYKVILEELNKYRVHCGSLVNYDWVSVPLVYTQVV
TVAVYMFFVSTLLSRQYLDPDMNYSGHEVDLYVPIFTICQFFFYMGWLKVAEQLINPFGE
DDDDFEVNWCIDRNLEISMLAVDQMYSKHPKLERDLYWGVPNPDVPYTAASANHKVDPFM
GSTFDMRLAKEDVQIPENRMERLVEQSDLMQQTNDDKSKQISKNASTNNKFDNLRLLRRR
FQFDSDTTPLMTPNINPTSEQSPSDSSEDEAGSMTSPEIGRDDDQSAKEDIVTSESEDET
VNKESEKDEQKLLISEKSVDISSMQNIDKLVVNNELQKEEATVEPEKKQPVRDERKVNAL
PNTTTHNKSRKIPKKRVPPLPGAKVGAEQKHVLKPPAIHRIPADSDRENAQKRIYLAAKR
KRSKNFVPPHRRQQQRRGYNNKIWLGPSRLFRDSIASPDTGSMFSETDVASNPANDSPFG
SLMSFGTSIPSPKQLRWAFRSRTRNLDGEVTSLTSSMPSPSGNEGGGTDMMPSLSRPPLL
ELPAYPAVVTEHIESRRAAFQTNSNVATAEIEPMMPFTDNLRRRLQVLPNPGSPAAGSPL
ANRVWDTRPVMENSNLLMIAEESVRPSFDTRKRKEATKLPPTGTNAIGIRQHLIDLTSKI
EPKKKIANLKSESGNSSSSSGEKPRGKRARNPNEGPEVDVRGLRRNSNSFWSVIKTWKNK
RKERKPSDEQQKFMAENSAVTAGPPLGLFVKRSLSKSEEGLCGRKNSSITTPFDSMVTWE
NEMNSSFHKFQPGIARPSFLPIHPFTDSNNNKEPATYDGYPLTTQLFLQPSKSESCLDSK
SVSAQPSPNAMADTSRKTQDVDTKVGVHYCEACRDELKCVKSKEETEDHLITIDKQNLEV
VKNKEKESVAGNIIQNNEQEQDLLELSSDEKSEKGDVDSTLCLEKESVNWEIGSNELVLK
SNDSSCAHKLRYLSARCGTEKLFFIYSAKVFLFSFCSDFRIL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaacatacacgcacgaagttgcgaatgcgagactttctggattttccagcttg
ttggtgcggtggaaggggagtgtttataaacttttttacaaggaatttcttatcttcatc
acactgtacacgattctcactgtggtctaccgagctttattgcatggagaaagcaaagtt
tacttcgaaaagttgtgtttacagttccaaagctacaccgacttgatacccattagcttc
gtgttagggttttacgttacactgatcgtcgggcgctggtggtcccagcttgagcattta
ccttttcctgattcaattatgttgttaattggtgcgaatgtacatggcaatgacgacagg
ggacaagtcacacggcgaactcttatgcgttatataaatatggcccaggttctcatgtac
agatgcgtatcaaccgctgtgtataaaaggttcccgaccatggaacatgtagtcgctgca
ggcatcatgaccaagagtgagcacagcgtttacgaaaacgtcaaaacggagaacttaaag
tactgggtgccgtttatgtggttcactaatttattgtcgaaattacgtcaagagggtcga
atatacgatgacatgacgtacaaagtaattttagaagagttaaacaagtaccgtgtgcat
tgtgggtccttggtaaactacgattgggttagcgtccccttggtgtacacacaggttgta
acggtggcggtttacatgtttttcgtatcgacgctgctcagtcggcaataccttgatccg
gatatgaactacagcgggcatgaagttgacttgtatgtgccaatctttaccatctgtcag
tttttcttttatatgggatggctgaaagtcgccgaacaactcattaacccttttggggaa
gatgacgacgactttgaggtaaactggtgcattgacagaaatttagaaatctccatgctt
gctgtcgaccaaatgtattccaaacaccctaagcttgaaagggatttatactggggtgtt
cctaatcccgatgttccatacacagctgcatctgccaaccataaagtggatcccttcatg
ggttcaacatttgatatgagactcgccaaggaagatgttcaaattccagaaaatcgaatg
gaaagattagtcgagcagagtgatttaatgcaacaaacaaacgatgataagtcaaagcag
atttcgaaaaacgcatcaacaaacaataagttcgataatcttcgcctgctgagaagaagg
tttcagtttgattcagacactactccacttatgacaccgaacatcaacccaacttcggaa
caatcaccatctgattcaagtgaggacgaagcaggctccatgacgtcaccagaaatagga
agggatgatgaccaaagtgcaaaagaggacattgttacgtcagaatcagaagacgaaact
gtcaataaagaaagcgaaaaggacgaacaaaagttacttatttctgagaaatcggttgac
attagttcaatgcaaaacattgataagctagttgtaaacaatgagcttcaaaaagaagaa
gcaactgtagagccagagaaaaaacaaccggtcagagacgaacgaaaagttaacgcccta
ccgaataccaccacgcacaacaaatcaagaaaaattccgaaaaagcgagtacctcctttg
ccaggagcaaaagttggagccgaacagaaacatgttttaaaacctccagcgattcaccga
atacctgcggacagcgatagagagaatgcacagaaaagaatttatttggcagctaaaaga
aagagatcaaagaacttcgtcccaccacacagaaggcagcagcagagaaggggatataac
aataagatatggcttggaccaagtcgcttatttcgtgattctatcgcttcgccagacacc
ggctccatgtttagcgagaccgacgttgcttcaaatcctgctaatgattcaccgttcggt
tcactcatgtcatttggtacttccattccatcgccgaagcaattaaggtgggcattcagg
tccaggactcgaaacctggacggagaggtaacctcattgacctcctcaatgcccagtcca
tcaggaaatgaaggtggcggtacagatatgatgccatctttaagccgaccgcccttgctt
gaacttcctgcttatccagcggttgtaactgaacacattgagtccaggcgagcggcattt
caaactaattcaaatgttgccaccgccgaaattgaaccaatgatgccgtttaccgacaac
ttacgtcgaaggttacaggttttgccgaacccgggatctcctgcagcgggctcgcctttg
gctaatcgagtttgggatacacgtccggttatggagaacagtaacttgcttatgattgca
gaagagtcggtacggccaagctttgatacaaggaaaagaaaagaagctactaagttgcca
ccaacaggtactaacgctataggaattcgacagcatctgatcgacttgacgtcaaaaata
gaacctaaaaagaagattgcaaatttgaaatcagaatccggaaactcgagctcgagttcc
ggtgaaaaaccacgcggaaaacgagcacggaacccgaacgaaggacctgaagtagacgta
cgtggtttgcggagaaatagtaacagtttctggagcgtcattaaaacttggaaaaacaaa
agaaaagaacggaaaccttcagatgaacaacagaagtttatggcagaaaattcagcagtg
actgctggaccaccattaggattattcgtcaaacgaagtttatcaaaatccgaagaaggg
ttatgtggtcgaaaaaactcatcaatcactacaccctttgacagcatggtaacttgggaa
aacgaaatgaactcttcctttcataagtttcagccaggcatagcaaggccttcgtttttg
ccgattcatccgttcaccgactccaataacaataaagaaccagcgacatacgacggttac
cctctcactacacaactatttctccagccctctaaatccgagtcatgtcttgactccaaa
tcagtgtctgcccaaccctcaccaaatgctatggcagatacttcacggaaaacacaagat
gttgatacaaaagttggtgtccactattgcgaggcgtgcagggacgaacttaagtgcgtt
aagtctaaagaagaaacggaagaccatctaatcaccattgataaacaaaatttagaggtg
gtcaaaaataaggaaaaagaaagtgtggcggggaacattatacaaaacaatgaacaagaa
caagatttacttgagttaagttccgacgaaaaaagcgaaaagggtgacgttgattcgacg
ttgtgtttggagaaagaatcggtaaactgggaaattggttccaatgagttagttttaaaa
agcaacgattccagttgtgcacataaattgagatacctttctgctcgctgtggcacagag
aagttgttttttatttattccgccaaagtatttctattttcattttgtagtgattttaga
atattatag
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