Ciona intestinalis (yellow sea squirt): 100180915
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Entry
100180915 CDS
T01056
Name
(RefSeq) cilia- and flagella-associated protein 74-like
KO
K25607
cilia- and flagella-associated protein 74
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100180915
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Sperm associated proteins
100180915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASH
DUF1573
Motile_Sperm
Motif
Other DBs
NCBI-GeneID:
100180915
NCBI-ProteinID:
XP_018669603
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All DBs
Position
11:753539..772115
Genome browser
AA seq
1692 aa
AA seq
DB search
MEFESVQRFPPSEDKWNESSSDEEPYGGGQYDDFEDLFSNETESVQNESDESEIGMYLEM
EPGTQKEVAQLIVLRRHLDSLQEQLSEKEFLVMKSREELAACRTRTKALEIELNEVLNEI
KQSLESENVASYHRLVSQKAKLETEIESDKKLEIEINNNLQESELNLSRVEIEQRHYVEL
AEQVVAKEERVNQHKMKMAKYRLGKERKAAILEKRKWKNAERELTDLIKAREFAHEKALE
AAIENQKKARKFLKQSLSRVRDKEQTQVENEVANIGGRVKSIISLKESINSNRENLKALQ
ARDAAFKKQRETSELLERNQVLREGGNPQQVLLRRKKKEEFEKNKISFKTQQTTNRMKIV
STILKEEENIERRKKQQPQLWSTKHTEKLKEIQPLKKPSIHTKIELTEDNEPIFLQQTKY
LQQTPREDVQREVDSVSSSSGQDISQSPSTLALRKTTMVANDNEEEDLAQPEFQGMWDQK
HKVYKVPKEDVTLKPTGGTKMEHDIMKRTLAKHKDGIIVQQVAAGREFKGRPFNSKPEVI
HFKDLDVGRVYKKKITITNVSYSINFCKLCGLSEHLKDFIKIDFEPPGQMSAGMSCDMFV
TFKPMINEDLIGEVFFLAQTGPFSIPLKCTTKKCDLSVDVESINFGTQVVGETIRRSVVL
QNKGALGSRFDFQKIPENPATTYTLETSLGRLTTAETPGMTPNDVSERLKTSTTIPLNTA
LKSRRTQQSERLTDNPQTAETLGKMTEFPIQGDEEYEEQHGDYRDEGDEITFVTPATEYQ
AVPDELKVGEIMSGEIEPFSSIKLDIIFAPCIPGDIQANFRISFTDAESQPLLIKTKAVA
IDVPVWLERQNVDLKVCMYDRLYQEQIVVHNRASTALRLNFEVPKELRNHMELLPKTGYI
QAKQTFTAQLKFLPRQTLAEDSGGLFDIETGIVEAPMVIRVADQTRPVPFVINAVVTSSD
LEFDRPSVDFGCCGIHESVVSTVKLTNHSILPQLFGFVGIPEYVDIQPNDGFGTILPLET
IDIDIIINAKRARDYDFTLLCKSGINREFPLHCRAVGVHPPLELSHQVINFAATALDDVS
TSTFHVVNSHISSNEFTHPVPRIGKGEIAKVGPTSFEFMVPDNIPISITPSVGTVQPGEK
CHITVEFSPKLHEYDVRKEAVRVIESMREEKAKEQEEKRIREAEELAKKQLEEEKQPKGK
KTPKTPAKPKTGESAPKSGKSSAKSSEQASDAPLPTPEEIDDKSKAYKAAHAFLTRNYPG
SFQTFIIPCLVASGSCSDDDLSLKYNTANTLYLEVHCPVIKPPVVIISNQGHSLTDFGQV
SIGQNAIKPISIQNISENSVELKVSVLDTSGPFQMLNALRTLKPDETHTILVSFTPNMGK
VFYEVLKIIGPSSELDVCLTGHGVTPVIKLVPNQRFLDLGHVITGETSSTAFTLENQSSL
AIKYSIRLDSGSLLRHHNLQQLPDFISRSGDERKALVGPQNHNGSAVFDCVPCEGNISTG
ESHEINVTFQPDQPSTKFSDGARIILFNTEEAHVIELRGKAHDHMMFIEGNDPLDVPVES
LTSDGGNKDTNGDAIVPMKNILLSFMSHVSEKGFSPAQRKLDIGCVKSIAFAARKNGEWS
VDNIQSAQNAGFSIEPLKSTVDVDSTKPIQFTWTPPENHDPNVPVTTSVLLTLKGDVTLN
YNVILSGLVSFK
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagagcgtacagcgttttccaccaagtgaagataaatggaatgaaagttcg
tcagacgaagaaccttacggaggtggccaatatgatgattttgaagatctttttagcaac
gaaactgagtctgtccaaaatgaatctgacgagtcagagataggaatgtacttggagatg
gagccaggcacgcagaaggaagttgctcagttgatcgtcttacgtcgtcatcttgattca
ctgcaagaacaactttcagaaaaagagtttttggtgatgaagtcaagggaggagctagca
gcatgtaggacgcgcaccaaggcgttggaaattgagttaaatgaagttctgaacgagatt
aaacaatcgctggaaagtgagaatgtcgcttcatatcatcgtctcgtgtcacagaaagct
aaacttgaaacggaaattgaatctgacaagaaattagaaattgaaataaataataatctt
caagaatctgaacttaatttatcccgggttgaaattgagcagcgtcattatgttgaactc
gctgagcaagtcgttgctaaggaggaaagggtgaatcagcataaaatgaagatggcaaaa
tatcgactcggcaaagaaaggaaggccgccatcttggaaaaacggaagtggaaaaatgct
gaaagagaacttactgacctcataaaagcaagagagtttgcacatgagaaagcactagag
gccgctatagagaatcagaaaaaagctcgaaaatttctcaaacaaagtttaagccgtgtt
cgtgataaagaacaaacacaagtggaaaatgaagttgcgaatattggggggagagtgaag
agtattatttcattaaaggaaagcatcaactcaaacagggagaatcttaaagcactgcag
gcccgagatgctgcgttcaaaaagcagcgtgaaacatcagaactactggagcggaaccaa
gttttaagagaaggaggaaacccacaacaagtcttgcttcgaaggaagaaaaaggaagaa
tttgaaaaaaataaaatatctttcaaaactcagcaaacaacgaatcgaatgaaaatcgtt
tcaacaattttgaaagaagaggaaaatattgaacgtaggaagaagcaacagccccaactc
tggtcaaccaaacacacagagaagttaaaggaaatccaaccactgaagaaaccatccata
catactaagatagaactaactgaggataatgaaccgatatttcttcaacaaactaagtat
ttgcaacaaacgccgcgcgaggatgttcagagagaagtggactctgtatcgtcatctagt
ggtcaagatatttctcaatctccgtcaacgttggctcttcggaagacaacaatggttgcc
aacgacaacgaggaagaagatcttgctcaacctgagttccagggaatgtgggatcaaaaa
cataaagtttataaggttccaaaagaagacgtcactttaaaaccaacaggggggacaaag
atggagcatgatataatgaaacgtacgctggcaaaacataaagatggtataatagtccag
caggtggcagcagggagagagttcaaaggtcgaccattcaacagtaaaccagaggtcatc
cactttaaggatcttgatgtcgggcgagtttacaagaaaaagatcacgatcaccaatgtt
tcgtacagcatcaacttttgcaagttatgtggattatctgaacatttaaaagattttatc
aaaattgatttcgaaccccctggacaaatgtcagctggaatgtcatgtgacatgtttgtt
acttttaaaccaatgataaacgaagatttgatcggtgaagttttttttctcgcacaaact
ggacctttctccattcctctcaaatgcacaaccaagaaatgtgatctttctgttgatgtt
gagtcgataaactttggaactcaagttgtcggcgaaacgattcgccgctcggtggtgcta
cagaacaaaggagcgctcgggtcaagattcgattttcagaaaattccggaaaatccagca
acgacgtacaccctggagacctcacttggaagattgacaacagcagagacaccagggatg
acaccaaatgatgtttcagaacggttgaagacgagcaccactattccattgaacaccgca
ctcaagtcaaggaggactcaacaaagtgaacgtttaacagacaatccacaaactgctgaa
actttggggaaaatgacggaatttccgattcaaggtgatgaagaatatgaagaacaacat
ggagattacagagacgaaggagatgagataacgtttgttaccccggcaaccgaatatcag
gcagttcctgatgaactcaaagttggggagataatgagtggtgaaattgaaccgttctca
tcaatcaaactcgacataatatttgccccatgcattcctggagatatacaagctaacttc
cgtatttcattcactgacgcagagtcacagccgcttctgatcaaaacaaaagcggttgcc
attgatgtccctgtgtggttggaacgccagaatgtggatttgaaagtttgcatgtatgac
aggttgtaccaagagcagatagtagttcataacagagcgagcactgcgcttcgtttaaac
tttgaagttcccaaggaattgcgtaatcacatggagttgttgccgaagacaggatacata
caagccaagcaaacatttaccgctcaactcaagtttctaccaagacaaaccctggcagag
gacagcggaggtttgtttgacatcgagacagggatcgttgaagcaccaatggtgatacga
gttgctgatcaaactcgtcccgttcctttcgtcataaacgccgttgtgacatcatcagat
cttgaatttgatcgaccgagtgtagactttggttgctgtggaatccacgagtcggttgtt
tcaactgtaaagttgacaaatcattcaattctcccccagttgttcggttttgttggaatt
cctgagtacgttgatattcaacccaatgatggattcgggacaatcttaccgcttgaaaca
attgacatagacatcataatcaacgctaagcgtgctcgtgattatgacttcacactcctg
tgtaaatctgggataaatagggaattcccgctccattgtcgagcagtgggggttcaccca
ccactggagctgagtcatcaggtcatcaactttgccgcaacagctttggacgatgtttcc
acctcaaccttccatgttgttaactctcatatcagttcaaatgagtttacacaccctgtg
cctaggattggtaaaggggaaatagcaaaagttggtcccacttcatttgaatttatggtc
ccagataatatcccaatatctattacaccttcagtaggaacggttcaaccaggggagaaa
tgtcacataactgtggagttttcccccaaacttcatgaatatgatgtcagaaaagaagct
gtgcgtgtcatagagagcatgagggaggagaaagcgaaagagcaagaggagaagagaata
agagaagcggaggaactcgctaaaaagcaattagaagaagaaaaacagccaaaagggaag
aaaacgcccaaaactccggcaaaacccaaaactggagaatctgctccgaaatctggtaaa
agttcggcaaaatcttcggaacaagcgagtgacgcacctcttcctacaccagaggaaatt
gatgataagtcaaaagcatacaaagcagctcatgcgttcctaacacgcaattatcctggt
tcatttcaaacttttatcattccatgcctcgtggcttccgggtcgtgctcggatgatgat
ttgtcgctgaaatacaacactgcaaacacattataccttgaagtccattgtcctgtcata
aaacctcccgttgtcataatatccaaccaagggcacagcctcactgactttggacaagtt
tctatcggacaaaacgcgattaaaccaatcagtattcagaacatatctgaaaactcagta
gagcttaaagtttccgtccttgatacaagtgggccgttccaaatgttgaacgcactccga
acgttaaaacccgatgaaacacacaccatacttgtctctttcacaccaaatatgggcaaa
gtgttttacgaagtgttgaagataatcggcccgtcgtctgagctcgacgtttgtctcaca
ggtcacggggtcaccccggtcattaaacttgttccgaatcaacgattcctcgacctaggt
catgtgatcacgggggaaacctcatcaactgctttcacgctggaaaaccagtcgtcatta
gcgattaaatacagcattcgattggacagtggttcattattacgacatcataatctgcaa
caattacctgattttatatcaagaagtggtgatgaaagaaaagctttagttggtcctcaa
aatcacaacggttcagccgtatttgattgcgtaccgtgtgaaggcaacatcagtactggt
gaatctcacgagataaacgtcacgttccagccagatcaaccaagcactaagttttcagac
ggcgcaaggataatattatttaatacggaagaagctcatgtgattgaactacgaggtaaa
gctcacgatcacatgatgtttattgaggggaatgatccactagacgtccctgttgagtcg
ctgacatcggacgggggaaacaaagatacaaacggagatgcaatcgtcccgatgaaaaat
attctgctttccttcatgagccatgtgtcagagaaagggttttcccctgcacagagaaag
cttgacattggttgtgtcaaaagcatcgcgtttgctgcaaggaagaacggtgaatggtca
gtggataatattcaatcggctcagaacgccggtttcagcatcgaacctctcaaatcaact
gttgatgttgattcaacaaaaccaatacaatttacttggactcctccagagaaccatgac
ccgaatgtcccggtcactacgtcagtgttgctgacgttgaaaggtgacgtcacactcaac
tacaacgtcatactatccggcctcgtttcgttcaaatga
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integrated database retrieval system
