Ciona intestinalis (yellow sea squirt): 100182757
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Entry
100182757 CDS
T01056
Name
(RefSeq) coadhesin-like
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
TSP_1
TSP1_spondin
VWA
TSP1_ADAMTS
Trefoil
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
100182757
NCBI-ProteinID:
XP_002122769
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Position
2:4212439..4220936
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AA seq
995 aa
AA seq
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MFENLCAGIFKMLVFLNFFDSVDCRNPSRLFALFTSLWAVLLIHTTAGQATSSCQCQVNV
SYRRLCTSVTGLTNQATCEQAGCCYDSRSFPIIFGLYSPRCFEATGGPCVSQKCTIPTSM
RRNCGYYYRYACERIGCCFDSSQAPSCYIAQTASTPTTATTPTAVTIGRTSMHGWSQWLA
WSTCTSTCGRGVRRRARFCSYLRSGREVDMHFCGRRVEAAQSEFCNTALCSAWSSWSRTG
TCSVTCGNGGSIATERRCIGIGNPGSSSCVRKETSCGAALACPTTITAWSDWTAWTDCST
GGCSPGRRSRYRRCKQAESDVNLVLCIDDSFKYLLPLSYYASYYSQQENCNNYMCTAWTT
WTAYGACPSSCRSSFGDTPQRISRRECVTDTFARPQNVEERDFFTQCSNRFVDCVLPICS
QQTTELPFTRRVTVPQTIISTVPYTIMTTPYQTQPAYTSTLPTELPYTTSTFPTQPASTL
PTEVAFTTVPTNPPTTFTDPPSTTPVETTFRQTTQGPQTTIPPTPATTLLPDARWSPWTG
WSRCSTSCGPGIQLRLRQCVDSNNNMLSGPSLCGSGPLIENGTCNENLCGTWGEWSPSNC
VVDCSATTTNQGFHLGSVNRTRECATSNTDKGMPDCYIHTSSCLSDVQCSVTVTTAESST
VPNVPVLGEWGAWSECSSETCGSGVRRRSWSCFTPQACVDVEDEEEACDNDPCDNWSQWS
SGACSARCGEGVRRTSRRCLDDVGIIPVVCNERNETCNAGECDQDVDFLFLVDSSDKVDG
CPALLRTGLTKPVTPQFQSNESTPVYTKMKEFMSSLVTDWRTVEDSKSHVAVQLFSEACS
LSSDYNLNLVKKISDNNDNVTSYIDSINYLCGDPWLDWALRCTQRKVLTSSYGDRSNVPN
VMIALVSAIPRAYRPSNFLLSTLSSSIKRRGVTIITVTVTPNSRMSALSRQKHVEMMRTL
ACQSTSGACPNYIGSIWDGGSPAQRIRDALRAANP
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaatttgtgtgcaggaatttttaaaatgttagtttttctgaatttttttgat
tcggttgattgtcgcaatccgtcacgtctgtttgctttgtttacgtcactatgggcggtt
cttctgatccacacaacggctggacaagctacgtcatcatgccaatgccaagttaatgtt
tcttacagaagactttgtacctcggtaactggtcttactaatcaggcaacgtgcgaacaa
gctggttgttgctacgattctagatcatttccaatcatttttggactttactcgccacgg
tgtttcgaagcaacaggtggtccttgtgtgagtcaaaagtgcacaattccaacttccatg
cgaaggaattgtggatactattaccggtatgcttgtgagcggattggttgttgtttcgat
agttctcaagcaccctcttgctacattgcgcaaacagcttcgactccaacaacggctaca
acgccaacggcggtgaccatcggcagaacaagcatgcatggctggtctcaatggttagct
tggtcaacgtgtacgtctacttgtggcagaggtgtaagacgaagagcaagattctgctcg
tatttacgttctggtagagaggttgatatgcacttttgtggccgaagggtcgaagcggct
cagtcggaattttgcaacactgcgctttgctcggcttggagcagctggtcaagaaccgga
acctgttctgttacctgcggcaatggaggaagtattgccacagaaaggcggtgcattgga
attggaaacccagggtccagttcttgcgttcgtaaggaaacgtcatgtggcgctgcgctt
gcttgcccgacaactattactgcttggagtgattggacggcctggacagactgttccaca
ggaggttgttcaccaggacggcggtcaaggtatcgtcgttgtaaacaagcggaaagcgac
gtgaacctggttctatgcattgatgattctttcaagtatcttctgccgttgtcgtactac
gcatcttattattcacaacaagaaaactgcaacaactacatgtgcactgcctggacaacc
tggacggcttacggcgcttgcccgagttcgtgccgatcaagtttcggtgacacaccacaa
agaatatccagacgagaatgcgtgaccgatacctttgctcggcctcaaaacgtcgaggaa
cgcgacttttttacacaatgtagcaatcgattcgttgactgcgttttgccaatttgctct
caacaaacgaccgagctacctttcacacgacgagtaacagtacctcaaaccattatctca
acagtaccttatactataatgaccaccccataccaaactcaaccagcttacacgagtact
ttgccaaccgagcttccatataccaccagcacatttccgacccaaccggcttcgacttta
cctacagaagttgcgtttacgaccgtacccacaaaccccccaactacttttactgacccg
ccgtcgactactccggtggaaacaacttttcgacaaacaactcaaggtccccagaccacg
attccaccaacaccagcaactactttattacctgatgctcgttggtccccttggacaggt
tggtctcgctgttccacttcatgcggacctgggatccaactaagactccgtcaatgtgta
gatagcaacaacaacatgttaagcggccccagtttgtgcggttccggtcccttaattgaa
aatggaacttgtaacgagaatttgtgtggaacgtggggagagtggtcaccatccaattgc
gtcgtggactgctcggcaacaactactaaccaaggattccatcttggaagtgtaaaccgg
acaagagagtgtgcaacatcaaacacagataaagggatgcccgattgttacatacacaca
agctcgtgtctttcggacgttcaatgctcagttaccgtcactacagcagaatcctcaacg
gtaccgaacgtacctgtgttaggggaatggggagcgtggagcgaatgttcgagtgaaact
tgtggttcaggtgtaagacgacgtagctggtcttgctttacacctcaagcgtgtgtggat
gtagaagatgaagaagaagcatgtgacaatgacccttgtgacaattggtcccagtggtct
agcggagcctgtagtgcacgatgcggggaaggcgtaagacgaacaagtcgtcgttgtctt
gatgacgtcggaataattccagtagtttgtaatgaacgtaacgaaacttgcaacgcggga
gaatgcgatcaagacgtggatttcctgtttctggtcgactcatcggacaaagtggatgga
tgtccggctcttttacgtactgggttaactaaacctgtaacaccacagttccaaagcaac
gaaagcacgcccgtgtatacgaaaatgaaagaatttatgtcatcattggtgactgattgg
cgaacggtagaagactcgaagtcccatgttgctgttcagctgtttagcgaagcgtgtagc
ctttcttcagattacaatttgaacttggtgaagaagataagcgacaacaacgataacgtc
actagctatattgattccatcaactacttatgtggtgatccgtggttagactgggcatta
cgatgcacgcaacgtaaggtccttacgtcatcatacggcgacagatctaacgtcccgaac
gtgatgattgcattagtgagcgccattccacgagcttaccgcccatcaaattttctcctt
tcgactctgtcgtccagtataaagcgaagaggtgtcaccatcatcaccgtaactgtaacc
ccaaactcgcgcatgagcgccctctcgcgacagaaacacgttgaaatgatgcgaacgctt
gcatgccaatccaccagcggagcatgcccgaactatattggttcaatatgggacggtgga
tccccggcacagagaatacgggatgcactccgagcagcgaacccgtaa
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