KEGG   Ciona intestinalis (yellow sea squirt): 100182757
Entry
100182757         CDS       T01056                                 
Name
(RefSeq) coadhesin-like
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin VWA TSP1_ADAMTS Trefoil TSP1_CCN
Other DBs
NCBI-GeneID: 100182757
NCBI-ProteinID: XP_002122769
LinkDB
Position
2:4212439..4220936
AA seq 995 aa
MFENLCAGIFKMLVFLNFFDSVDCRNPSRLFALFTSLWAVLLIHTTAGQATSSCQCQVNV
SYRRLCTSVTGLTNQATCEQAGCCYDSRSFPIIFGLYSPRCFEATGGPCVSQKCTIPTSM
RRNCGYYYRYACERIGCCFDSSQAPSCYIAQTASTPTTATTPTAVTIGRTSMHGWSQWLA
WSTCTSTCGRGVRRRARFCSYLRSGREVDMHFCGRRVEAAQSEFCNTALCSAWSSWSRTG
TCSVTCGNGGSIATERRCIGIGNPGSSSCVRKETSCGAALACPTTITAWSDWTAWTDCST
GGCSPGRRSRYRRCKQAESDVNLVLCIDDSFKYLLPLSYYASYYSQQENCNNYMCTAWTT
WTAYGACPSSCRSSFGDTPQRISRRECVTDTFARPQNVEERDFFTQCSNRFVDCVLPICS
QQTTELPFTRRVTVPQTIISTVPYTIMTTPYQTQPAYTSTLPTELPYTTSTFPTQPASTL
PTEVAFTTVPTNPPTTFTDPPSTTPVETTFRQTTQGPQTTIPPTPATTLLPDARWSPWTG
WSRCSTSCGPGIQLRLRQCVDSNNNMLSGPSLCGSGPLIENGTCNENLCGTWGEWSPSNC
VVDCSATTTNQGFHLGSVNRTRECATSNTDKGMPDCYIHTSSCLSDVQCSVTVTTAESST
VPNVPVLGEWGAWSECSSETCGSGVRRRSWSCFTPQACVDVEDEEEACDNDPCDNWSQWS
SGACSARCGEGVRRTSRRCLDDVGIIPVVCNERNETCNAGECDQDVDFLFLVDSSDKVDG
CPALLRTGLTKPVTPQFQSNESTPVYTKMKEFMSSLVTDWRTVEDSKSHVAVQLFSEACS
LSSDYNLNLVKKISDNNDNVTSYIDSINYLCGDPWLDWALRCTQRKVLTSSYGDRSNVPN
VMIALVSAIPRAYRPSNFLLSTLSSSIKRRGVTIITVTVTPNSRMSALSRQKHVEMMRTL
ACQSTSGACPNYIGSIWDGGSPAQRIRDALRAANP
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgttcgaaaatttgtgtgcaggaatttttaaaatgttagtttttctgaatttttttgat
tcggttgattgtcgcaatccgtcacgtctgtttgctttgtttacgtcactatgggcggtt
cttctgatccacacaacggctggacaagctacgtcatcatgccaatgccaagttaatgtt
tcttacagaagactttgtacctcggtaactggtcttactaatcaggcaacgtgcgaacaa
gctggttgttgctacgattctagatcatttccaatcatttttggactttactcgccacgg
tgtttcgaagcaacaggtggtccttgtgtgagtcaaaagtgcacaattccaacttccatg
cgaaggaattgtggatactattaccggtatgcttgtgagcggattggttgttgtttcgat
agttctcaagcaccctcttgctacattgcgcaaacagcttcgactccaacaacggctaca
acgccaacggcggtgaccatcggcagaacaagcatgcatggctggtctcaatggttagct
tggtcaacgtgtacgtctacttgtggcagaggtgtaagacgaagagcaagattctgctcg
tatttacgttctggtagagaggttgatatgcacttttgtggccgaagggtcgaagcggct
cagtcggaattttgcaacactgcgctttgctcggcttggagcagctggtcaagaaccgga
acctgttctgttacctgcggcaatggaggaagtattgccacagaaaggcggtgcattgga
attggaaacccagggtccagttcttgcgttcgtaaggaaacgtcatgtggcgctgcgctt
gcttgcccgacaactattactgcttggagtgattggacggcctggacagactgttccaca
ggaggttgttcaccaggacggcggtcaaggtatcgtcgttgtaaacaagcggaaagcgac
gtgaacctggttctatgcattgatgattctttcaagtatcttctgccgttgtcgtactac
gcatcttattattcacaacaagaaaactgcaacaactacatgtgcactgcctggacaacc
tggacggcttacggcgcttgcccgagttcgtgccgatcaagtttcggtgacacaccacaa
agaatatccagacgagaatgcgtgaccgatacctttgctcggcctcaaaacgtcgaggaa
cgcgacttttttacacaatgtagcaatcgattcgttgactgcgttttgccaatttgctct
caacaaacgaccgagctacctttcacacgacgagtaacagtacctcaaaccattatctca
acagtaccttatactataatgaccaccccataccaaactcaaccagcttacacgagtact
ttgccaaccgagcttccatataccaccagcacatttccgacccaaccggcttcgacttta
cctacagaagttgcgtttacgaccgtacccacaaaccccccaactacttttactgacccg
ccgtcgactactccggtggaaacaacttttcgacaaacaactcaaggtccccagaccacg
attccaccaacaccagcaactactttattacctgatgctcgttggtccccttggacaggt
tggtctcgctgttccacttcatgcggacctgggatccaactaagactccgtcaatgtgta
gatagcaacaacaacatgttaagcggccccagtttgtgcggttccggtcccttaattgaa
aatggaacttgtaacgagaatttgtgtggaacgtggggagagtggtcaccatccaattgc
gtcgtggactgctcggcaacaactactaaccaaggattccatcttggaagtgtaaaccgg
acaagagagtgtgcaacatcaaacacagataaagggatgcccgattgttacatacacaca
agctcgtgtctttcggacgttcaatgctcagttaccgtcactacagcagaatcctcaacg
gtaccgaacgtacctgtgttaggggaatggggagcgtggagcgaatgttcgagtgaaact
tgtggttcaggtgtaagacgacgtagctggtcttgctttacacctcaagcgtgtgtggat
gtagaagatgaagaagaagcatgtgacaatgacccttgtgacaattggtcccagtggtct
agcggagcctgtagtgcacgatgcggggaaggcgtaagacgaacaagtcgtcgttgtctt
gatgacgtcggaataattccagtagtttgtaatgaacgtaacgaaacttgcaacgcggga
gaatgcgatcaagacgtggatttcctgtttctggtcgactcatcggacaaagtggatgga
tgtccggctcttttacgtactgggttaactaaacctgtaacaccacagttccaaagcaac
gaaagcacgcccgtgtatacgaaaatgaaagaatttatgtcatcattggtgactgattgg
cgaacggtagaagactcgaagtcccatgttgctgttcagctgtttagcgaagcgtgtagc
ctttcttcagattacaatttgaacttggtgaagaagataagcgacaacaacgataacgtc
actagctatattgattccatcaactacttatgtggtgatccgtggttagactgggcatta
cgatgcacgcaacgtaaggtccttacgtcatcatacggcgacagatctaacgtcccgaac
gtgatgattgcattagtgagcgccattccacgagcttaccgcccatcaaattttctcctt
tcgactctgtcgtccagtataaagcgaagaggtgtcaccatcatcaccgtaactgtaacc
ccaaactcgcgcatgagcgccctctcgcgacagaaacacgttgaaatgatgcgaacgctt
gcatgccaatccaccagcggagcatgcccgaactatattggttcaatatgggacggtgga
tccccggcacagagaatacgggatgcactccgagcagcgaacccgtaa

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