KEGG   Ciona intestinalis (yellow sea squirt): 100186543
Entry
100186543         CDS       T01056                                 
Name
(RefSeq) fibrocystin-L-like
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: G8 Beta_helix NosD
Other DBs
NCBI-GeneID: 100186543
NCBI-ProteinID: XP_026696482
LinkDB
Position
1:9514631..9531641
AA seq 1630 aa
MLLLPDGKDYTMAFKNGAQFTNITYQSTYYSFSPQHYLYVTMILRQTPDVIAVNGVKTDV
NGSSPLTNKSPHGSSYFNPNTRGFSIKVAGQASSRKRRAITEAEANAQVDRPISPNIYRC
YYEGCIPPPDPENVPPIRDQPAVTQMWSQNTSCMKWTDDKNVVILHTVTINGVKAICWVL
FDLFTLDVESITVQGVLEFVQSSNITVEKLLILGGRVIAGYSPTEPYINELVINLRGNHS
SLGTIYPGISVGTKAIGCFGGLDLHGKKHNVLRSDLASTANIGAQSITLRDAVDWVVGEE
IVITTTGYRSNETEKKTIISVSEDKKTIGLNSALEYRHMGETYSVNGFRFDMRAEVALLT
HNIKIVGEWYDMIDKEAFGARLLVGSIRSSSGDRMTGWARISNVEFIRAGQEGWTEPYDP
RFGVAFVRTGTVSASRPSYVQNSAFHDSYSTAIGIFGASGINITGNVVHRAIHDGIRITG
SKHRVIGNLVTVTLFRGSYGDRFDKDNFMDWQAAFQLSEATNVVVMNNTAAGSERIGFRV
DGESCNAGDENAWMGNVAHGCLHGIQIFTSDGISPCSMLRNFVVYKSWDFGIYHQTQTSV
IVKDTIIADSTIGFAPVLFGPPALSHTYINKFSKLDNVLCIARSNHFDPSQDFMNESTDK
NLRIRNFGPQRSAPRNPHGGKTCILLPLFQSGATGSPFKPFIANKNYPMLHGLLNITKFT
ANNVKLQSDGTRDLVFWTNPSNEDAVHPTILSQTSLVNVEEESKVFIDRPSLSKINPADC
VDMECDAKKKVLIKDMDGGFLTAPGAIIPQAEFAWDDNNRRSRGLGDYRIPKPMLTGIEG
TRIPVSSIADQRGIIRNSACTYKPAWQAYDCHGDGVLDYQMLVIESLDGDTETRRLSPLA
LTGGRTIDLNNGPQDHGWCSGYTCQKRISTFYVIVTSGTHFDVFFTGYAPRRMKLHLLNV
ANDKTVRVAIWFPRPERLDVYQAEKDLYIFPQNSFYDTTRDLWNTRHPATSTPDQYKPPI
DSGVNGANYIDLKTRLLYITIRGPEPVKIVTVPMIQIAIGFPAISIDDFFGENLVQNLAV
YLGVPSYKIRVVNVVRETSRRKRDLRLRRSTEVVTYNIEYGDEIVNGTGSNVTSNSSLAA
EFLNQGVTKMLVDYQTGKLWQILNVTEGISLSSTQAATNLTTSADYETYLIEHKIPTSMS
IAFLPSTAEEYLVFPTQPVVTMLDSEGIPVTTLGGIWSVSVALDTTNGDNRATLMGTTTA
TFNKNGTATFTDLMITHSGNGYVLRFNISQPIGVNIQASPSITITQRTVNVRFTSGVGSL
FNHNDDALMTMQLQNNAGEPLPMVGYKGHTWKATVSFDDPSLYKGAQLSGITTFTFDPST
GSVSTAGLKILNTLSYHKYNLLFTVTTEPALYNIFAQAEPIQFKSSTDTLHLSTTVIRKA
SLELDGQSFLHKARSSVPRFTTFTTYMHNAMVTQLPTVLISGLTATVNTEGNTVVEFTIN
AYNDSIADEAVLTLISKTSDLGLTFNGHQLTVVDPACAVKIDDICSAQTNNIVVDSVPGV
WIIIVACVAVAVVLAVGFIGFSCYMKRAHRGKVASGVCMNSSHSSLGSSAFITGSSEKST
PAPPAAPVNF
NT seq 4893 nt   +upstreamnt  +downstreamnt
atgcttcttcttcctgatggtaaagattacacgatggctttcaaaaatggggcacaattt
accaacatcacgtaccagtcaacttactactcattcagtccacagcattacttgtatgtc
actatgatattgaggcaaacacctgatgtaattgcagttaacggagtaaagactgatgtt
aatggatcgtcccctcttaccaataagagtccacatggttcttcttactttaaccccaac
acacggggttttagtattaaggtcgccggacaagcgtcatccaggaaaaggagggcgatc
actgaggcagaagcaaacgctcaagttgatagaccgattagtccaaatatttatagatgt
tactacgagggatgtatacctccgcccgatccggaaaatgttccaccaatcagagatcag
ccagctgtcactcaaatgtggtcacaaaacacatcgtgcatgaaatggacggatgataaa
aatgtggtgattctacacactgttactattaatggagttaaggccatatgttgggtatta
tttgatcttttcactcttgatgttgaatcaataactgtccaaggagttctggaatttgtt
cagtcatcaaacattaccgtggaaaagctactgatcttgggaggtcgtgttattgctggg
tattcacctacagaaccctacatcaatgaacttgtcataaacttgcgaggaaaccattca
tctcttggaacaatctacccaggaatatcagttggaaccaaagccattgggtgttttgga
ggacttgacttgcatgggaagaaacacaatgtgttgaggagcgaccttgcatcaactgct
aacattggagctcaatcgatcacattacgtgatgctgtggattgggttgtaggggaagag
atcgtgatcacaacaacaggttacagatcaaatgagacagagaagaagacaataatctct
gtatcagaagacaagaagacaatcggacttaacagtgcattggagtatcggcatatgggc
gagacatactcagtgaatggttttcgctttgatatgagagccgaagtggctttgctgaca
cataacattaagattgttggcgaatggtatgatatgattgacaaggaagcatttggtgca
aggctattggttgggagcatcagaagtagctctggtgaccgaatgacaggttgggctaga
atcagcaacgttgagttcattagagctggtcaggagggttggacagaaccatacgatccc
aggtttggcgtggcgtttgtgagaactggaacagtttctgccagccgtccgtcttatgtg
cagaattctgcattccatgattcctattcaaccgccattgggatctttggagcaagtgga
attaacataactggaaatgtcgttcacagagcaattcatgacggtatcagaatcactgga
agtaaacatagagttattggaaacttggtgactgttacactcttcaggggatcatatggt
gatcggttcgataaggataacttcatggattggcaagctgccttccaactttccgaagct
accaacgtggttgtaatgaacaacacagctgcgggatcggaacgtattggtttccgtgta
gatggagaatcttgtaatgctggagatgaaaatgcatggatgggcaacgtggcacatggc
tgtcttcatggcattcagatatttacatctgatggtatctccccgtgctcaatgcttcgt
aactttgtggtttacaagtcgtgggattttggtatttaccatcaaacgcagacaagtgtt
atcgtcaaggatacaattattgccgactcaacgattggttttgctcctgtcctatttgga
ccgcccgcattgtcgcatacatatattaacaagttctctaagttggataatgttctgtgt
attgctcgaagtaatcattttgatccaagtcaggattttatgaatgaatcaaccgacaaa
aatcttcgcatcagaaactttggcccacaacgatcagcaccacgaaacccacatggaggg
aagacatgtattctcctgcctctgttccaaagtggagccactgggtctccattcaaacca
ttcattgcaaacaagaactacccaatgttgcacggcttgcttaatatcacaaagttcacc
gcaaacaacgtcaagttgcaatcagacgggaccagagatcttgttttctggacaaacccc
tcaaatgaagatgctgttcatccaaccattctctcacaaacctctcttgtaaatgtggaa
gaggagagcaaagtcttcattgatcggccaagtcttagtaagatcaacccagctgattgt
gtggacatggaatgtgatgccaagaagaaagttctcattaaagatatggatggtggtttc
cttacagctcctggtgcaattattccacaagctgagtttgcatgggacgataacaaccga
cgttcacgaggactgggagactacagaatcccgaagccgatgttgaccggaattgaaggg
accaggattcctgtgtcttccattgctgaccagagaggtatcataagaaacagtgcctgc
acctacaaaccagcttggcaagcatatgactgccatggcgatggagtccttgattaccag
atgttggttattgagagtttggatggtgatactgaaacaaggaggttatcacctctcgca
cttactggtggccgaactattgatcttaacaatggtccacaagatcatgggtggtgctcc
ggctacacctgtcagaagagaatctctactttctatgtcattgtaacaagcggaacccac
ttcgacgttttctttactggttatgctccaaggagaatgaagcttcatcttcttaacgtt
gcgaatgataagactgtccgcgttgccatctggtttccaagacctgagagacttgacgtt
taccaagcagagaaagatctttacatcttcccacagaattctttttatgacacaacaaga
gacctctggaacacaagacacccagccacgagcactccggatcaatacaaaccacctatt
gattcaggtgtaaatggagcaaactatattgacctgaagacccgtctcctctacattaca
attagaggaccagaacctgttaagattgtcacggtaccaatgatccagatcgctatcggg
ttccctgctatttctattgacgatttctttggggaaaaccttgtccagaatctcgctgta
taccttggtgttccatcatacaagatacgggtggtaaacgttgtgagagaaacttctaga
agaaagcgagatctcagattgagacgtagcacagaagtagtgacgtacaacatcgagtat
ggagatgaaatcgttaacggaaccggatctaacgtaacttcaaactcttcacttgccgct
gagttcctcaaccaaggcgtaactaagatgcttgttgattaccaaacggggaaattgtgg
caaattcttaacgttactgaaggaatatctctctcgtccacacaagcagcaactaaccta
actacaagtgcagattacgagacttacctaattgaacacaagatcccaacctcaatgagc
attgcattcctaccttcaactgctgaggaatatcttgtcttcccaacacaacctgttgtt
accatgcttgatagcgagggcattccggttacaacacttggaggcatctggtcagttagt
gttgctcttgatacaactaatggagacaacagagctaccttgatgggaacaacaactgca
actttcaacaaaaatggcacagcaacctttactgacctgatgataactcactcaggaaat
ggatatgttctcagattcaatatctcgcaacccattggtgtcaacatacaagcgagcccc
agcataacaatcacacaacgaactgtgaacgtcagattcacttctggtgttggttcattg
tttaatcacaatgacgatgctttgatgacaatgcaattacaaaacaatgctggtgaaccc
cttccaatggttgggtacaagggccatacatggaaagccactgtctcatttgatgacccc
agcctttataaaggagcccagctcagtggaatcacaacattcacattcgacccatcaact
ggaagtgtttcaaccgccggcctcaagatattgaacacactaagttatcataaatacaac
cttctcttcactgtgacaactgaacctgcactttacaacatatttgctcaagctgaacct
attcagttcaaatcatcaactgatactctccatctttccaccacagtcatacgcaaagct
tcacttgaattggacggacagagtttcctgcataaagccagatccagcgtgccacgattt
acaacattcacaacctacatgcacaatgctatggtcactcaattaccaacagtcctgatc
agtggacttactgcaactgttaacacagagggcaacacagttgttgagtttaccatcaat
gcatacaatgacagcattgctgatgaagcagtgctaactttgataagcaaaaccagtgat
cttggactcacatttaatggtcatcaacttactgtggttgaccccgcttgtgctgtgaag
attgatgatatctgctcagctcaaaccaacaacattgttgtggattcagtaccaggagtt
tggattataattgttgcatgtgtagcagtggcagtggtgcttgctgttggattcattgga
ttctcttgttacatgaaacgagcacaccgtggtaaagtcgcttcaggagtttgcatgaat
tcttctcacagctcacttggatccagtgctttcataacagggtcatcagagaaaagcacc
ccagcaccacctgcagctcctgtcaacttttaa

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