Ciona intestinalis (yellow sea squirt): 100186543
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Entry
100186543 CDS
T01056
Name
(RefSeq) fibrocystin-L-like
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
G8
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100186543
NCBI-ProteinID:
XP_026696482
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Position
1:9514631..9531641
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AA seq
1630 aa
AA seq
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MLLLPDGKDYTMAFKNGAQFTNITYQSTYYSFSPQHYLYVTMILRQTPDVIAVNGVKTDV
NGSSPLTNKSPHGSSYFNPNTRGFSIKVAGQASSRKRRAITEAEANAQVDRPISPNIYRC
YYEGCIPPPDPENVPPIRDQPAVTQMWSQNTSCMKWTDDKNVVILHTVTINGVKAICWVL
FDLFTLDVESITVQGVLEFVQSSNITVEKLLILGGRVIAGYSPTEPYINELVINLRGNHS
SLGTIYPGISVGTKAIGCFGGLDLHGKKHNVLRSDLASTANIGAQSITLRDAVDWVVGEE
IVITTTGYRSNETEKKTIISVSEDKKTIGLNSALEYRHMGETYSVNGFRFDMRAEVALLT
HNIKIVGEWYDMIDKEAFGARLLVGSIRSSSGDRMTGWARISNVEFIRAGQEGWTEPYDP
RFGVAFVRTGTVSASRPSYVQNSAFHDSYSTAIGIFGASGINITGNVVHRAIHDGIRITG
SKHRVIGNLVTVTLFRGSYGDRFDKDNFMDWQAAFQLSEATNVVVMNNTAAGSERIGFRV
DGESCNAGDENAWMGNVAHGCLHGIQIFTSDGISPCSMLRNFVVYKSWDFGIYHQTQTSV
IVKDTIIADSTIGFAPVLFGPPALSHTYINKFSKLDNVLCIARSNHFDPSQDFMNESTDK
NLRIRNFGPQRSAPRNPHGGKTCILLPLFQSGATGSPFKPFIANKNYPMLHGLLNITKFT
ANNVKLQSDGTRDLVFWTNPSNEDAVHPTILSQTSLVNVEEESKVFIDRPSLSKINPADC
VDMECDAKKKVLIKDMDGGFLTAPGAIIPQAEFAWDDNNRRSRGLGDYRIPKPMLTGIEG
TRIPVSSIADQRGIIRNSACTYKPAWQAYDCHGDGVLDYQMLVIESLDGDTETRRLSPLA
LTGGRTIDLNNGPQDHGWCSGYTCQKRISTFYVIVTSGTHFDVFFTGYAPRRMKLHLLNV
ANDKTVRVAIWFPRPERLDVYQAEKDLYIFPQNSFYDTTRDLWNTRHPATSTPDQYKPPI
DSGVNGANYIDLKTRLLYITIRGPEPVKIVTVPMIQIAIGFPAISIDDFFGENLVQNLAV
YLGVPSYKIRVVNVVRETSRRKRDLRLRRSTEVVTYNIEYGDEIVNGTGSNVTSNSSLAA
EFLNQGVTKMLVDYQTGKLWQILNVTEGISLSSTQAATNLTTSADYETYLIEHKIPTSMS
IAFLPSTAEEYLVFPTQPVVTMLDSEGIPVTTLGGIWSVSVALDTTNGDNRATLMGTTTA
TFNKNGTATFTDLMITHSGNGYVLRFNISQPIGVNIQASPSITITQRTVNVRFTSGVGSL
FNHNDDALMTMQLQNNAGEPLPMVGYKGHTWKATVSFDDPSLYKGAQLSGITTFTFDPST
GSVSTAGLKILNTLSYHKYNLLFTVTTEPALYNIFAQAEPIQFKSSTDTLHLSTTVIRKA
SLELDGQSFLHKARSSVPRFTTFTTYMHNAMVTQLPTVLISGLTATVNTEGNTVVEFTIN
AYNDSIADEAVLTLISKTSDLGLTFNGHQLTVVDPACAVKIDDICSAQTNNIVVDSVPGV
WIIIVACVAVAVVLAVGFIGFSCYMKRAHRGKVASGVCMNSSHSSLGSSAFITGSSEKST
PAPPAAPVNF
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcttcctgatggtaaagattacacgatggctttcaaaaatggggcacaattt
accaacatcacgtaccagtcaacttactactcattcagtccacagcattacttgtatgtc
actatgatattgaggcaaacacctgatgtaattgcagttaacggagtaaagactgatgtt
aatggatcgtcccctcttaccaataagagtccacatggttcttcttactttaaccccaac
acacggggttttagtattaaggtcgccggacaagcgtcatccaggaaaaggagggcgatc
actgaggcagaagcaaacgctcaagttgatagaccgattagtccaaatatttatagatgt
tactacgagggatgtatacctccgcccgatccggaaaatgttccaccaatcagagatcag
ccagctgtcactcaaatgtggtcacaaaacacatcgtgcatgaaatggacggatgataaa
aatgtggtgattctacacactgttactattaatggagttaaggccatatgttgggtatta
tttgatcttttcactcttgatgttgaatcaataactgtccaaggagttctggaatttgtt
cagtcatcaaacattaccgtggaaaagctactgatcttgggaggtcgtgttattgctggg
tattcacctacagaaccctacatcaatgaacttgtcataaacttgcgaggaaaccattca
tctcttggaacaatctacccaggaatatcagttggaaccaaagccattgggtgttttgga
ggacttgacttgcatgggaagaaacacaatgtgttgaggagcgaccttgcatcaactgct
aacattggagctcaatcgatcacattacgtgatgctgtggattgggttgtaggggaagag
atcgtgatcacaacaacaggttacagatcaaatgagacagagaagaagacaataatctct
gtatcagaagacaagaagacaatcggacttaacagtgcattggagtatcggcatatgggc
gagacatactcagtgaatggttttcgctttgatatgagagccgaagtggctttgctgaca
cataacattaagattgttggcgaatggtatgatatgattgacaaggaagcatttggtgca
aggctattggttgggagcatcagaagtagctctggtgaccgaatgacaggttgggctaga
atcagcaacgttgagttcattagagctggtcaggagggttggacagaaccatacgatccc
aggtttggcgtggcgtttgtgagaactggaacagtttctgccagccgtccgtcttatgtg
cagaattctgcattccatgattcctattcaaccgccattgggatctttggagcaagtgga
attaacataactggaaatgtcgttcacagagcaattcatgacggtatcagaatcactgga
agtaaacatagagttattggaaacttggtgactgttacactcttcaggggatcatatggt
gatcggttcgataaggataacttcatggattggcaagctgccttccaactttccgaagct
accaacgtggttgtaatgaacaacacagctgcgggatcggaacgtattggtttccgtgta
gatggagaatcttgtaatgctggagatgaaaatgcatggatgggcaacgtggcacatggc
tgtcttcatggcattcagatatttacatctgatggtatctccccgtgctcaatgcttcgt
aactttgtggtttacaagtcgtgggattttggtatttaccatcaaacgcagacaagtgtt
atcgtcaaggatacaattattgccgactcaacgattggttttgctcctgtcctatttgga
ccgcccgcattgtcgcatacatatattaacaagttctctaagttggataatgttctgtgt
attgctcgaagtaatcattttgatccaagtcaggattttatgaatgaatcaaccgacaaa
aatcttcgcatcagaaactttggcccacaacgatcagcaccacgaaacccacatggaggg
aagacatgtattctcctgcctctgttccaaagtggagccactgggtctccattcaaacca
ttcattgcaaacaagaactacccaatgttgcacggcttgcttaatatcacaaagttcacc
gcaaacaacgtcaagttgcaatcagacgggaccagagatcttgttttctggacaaacccc
tcaaatgaagatgctgttcatccaaccattctctcacaaacctctcttgtaaatgtggaa
gaggagagcaaagtcttcattgatcggccaagtcttagtaagatcaacccagctgattgt
gtggacatggaatgtgatgccaagaagaaagttctcattaaagatatggatggtggtttc
cttacagctcctggtgcaattattccacaagctgagtttgcatgggacgataacaaccga
cgttcacgaggactgggagactacagaatcccgaagccgatgttgaccggaattgaaggg
accaggattcctgtgtcttccattgctgaccagagaggtatcataagaaacagtgcctgc
acctacaaaccagcttggcaagcatatgactgccatggcgatggagtccttgattaccag
atgttggttattgagagtttggatggtgatactgaaacaaggaggttatcacctctcgca
cttactggtggccgaactattgatcttaacaatggtccacaagatcatgggtggtgctcc
ggctacacctgtcagaagagaatctctactttctatgtcattgtaacaagcggaacccac
ttcgacgttttctttactggttatgctccaaggagaatgaagcttcatcttcttaacgtt
gcgaatgataagactgtccgcgttgccatctggtttccaagacctgagagacttgacgtt
taccaagcagagaaagatctttacatcttcccacagaattctttttatgacacaacaaga
gacctctggaacacaagacacccagccacgagcactccggatcaatacaaaccacctatt
gattcaggtgtaaatggagcaaactatattgacctgaagacccgtctcctctacattaca
attagaggaccagaacctgttaagattgtcacggtaccaatgatccagatcgctatcggg
ttccctgctatttctattgacgatttctttggggaaaaccttgtccagaatctcgctgta
taccttggtgttccatcatacaagatacgggtggtaaacgttgtgagagaaacttctaga
agaaagcgagatctcagattgagacgtagcacagaagtagtgacgtacaacatcgagtat
ggagatgaaatcgttaacggaaccggatctaacgtaacttcaaactcttcacttgccgct
gagttcctcaaccaaggcgtaactaagatgcttgttgattaccaaacggggaaattgtgg
caaattcttaacgttactgaaggaatatctctctcgtccacacaagcagcaactaaccta
actacaagtgcagattacgagacttacctaattgaacacaagatcccaacctcaatgagc
attgcattcctaccttcaactgctgaggaatatcttgtcttcccaacacaacctgttgtt
accatgcttgatagcgagggcattccggttacaacacttggaggcatctggtcagttagt
gttgctcttgatacaactaatggagacaacagagctaccttgatgggaacaacaactgca
actttcaacaaaaatggcacagcaacctttactgacctgatgataactcactcaggaaat
ggatatgttctcagattcaatatctcgcaacccattggtgtcaacatacaagcgagcccc
agcataacaatcacacaacgaactgtgaacgtcagattcacttctggtgttggttcattg
tttaatcacaatgacgatgctttgatgacaatgcaattacaaaacaatgctggtgaaccc
cttccaatggttgggtacaagggccatacatggaaagccactgtctcatttgatgacccc
agcctttataaaggagcccagctcagtggaatcacaacattcacattcgacccatcaact
ggaagtgtttcaaccgccggcctcaagatattgaacacactaagttatcataaatacaac
cttctcttcactgtgacaactgaacctgcactttacaacatatttgctcaagctgaacct
attcagttcaaatcatcaactgatactctccatctttccaccacagtcatacgcaaagct
tcacttgaattggacggacagagtttcctgcataaagccagatccagcgtgccacgattt
acaacattcacaacctacatgcacaatgctatggtcactcaattaccaacagtcctgatc
agtggacttactgcaactgttaacacagagggcaacacagttgttgagtttaccatcaat
gcatacaatgacagcattgctgatgaagcagtgctaactttgataagcaaaaccagtgat
cttggactcacatttaatggtcatcaacttactgtggttgaccccgcttgtgctgtgaag
attgatgatatctgctcagctcaaaccaacaacattgttgtggattcagtaccaggagtt
tggattataattgttgcatgtgtagcagtggcagtggtgcttgctgttggattcattgga
ttctcttgttacatgaaacgagcacaccgtggtaaagtcgcttcaggagtttgcatgaat
tcttctcacagctcacttggatccagtgctttcataacagggtcatcagagaaaagcacc
ccagcaccacctgcagctcctgtcaacttttaa
DBGET
integrated database retrieval system