KEGG   Ciona intestinalis (yellow sea squirt): 493183
Entry
493183            CDS       T01056                                 
Symbol
rhamm
Name
(RefSeq) hyaluronan-mediated motility receptor
  KO
K06267  hyaluronan-mediated motility receptor
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    493183 (rhamm)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cin04090]
    493183 (rhamm)
   00536 Glycosaminoglycan binding proteins [BR:cin00536]
    493183 (rhamm)
CD molecules [BR:cin04090]
 Proteins
  493183 (rhamm)
Glycosaminoglycan binding proteins [BR:cin00536]
 Hyaluronan
  Cell surface receptors
   493183 (rhamm)
SSDB
Motif
Pfam: HMMR_C HMMR_N FapA ATG16 Fez1 DIL
Other DBs
NCBI-GeneID: 493183
NCBI-ProteinID: NP_001007565
Ensembl: ENSCING00000007486
UniProt: F6XWF2
LinkDB
Position
2:1527705..1541976
AA seq 779 aa
MSFPRAALKRFNEAKDSGPPPGHYTVKQPEKNLGTFKFEHAGERFKSMESIPDESVQADN
NTFTAPVPPITNSKKKLNFSGSENKKPEKRRTPVKSSPNVVSKEKQAYEREIRQLLQQCS
DREADIKRHKLEIQRFEGKVSILTKDKISLESNTSLMEKSIAALTKKNEFLIAQCEKEKK
KENSELDLKKLKTQILSMKQQSDRDKMKIANLEADLDAARSRIMALRDANKVLEQLNLEI
EKHGSDVSVQVERLQGLVDKLREENARLQDEGEDTKLKLTEIQEEFNEKLQCVLQERMKE
CENKTQAANKQVAELQTNIQDADAKLEELSETVNLLQCEKSDMHAVNVKLQQHISETEQR
CETFAAEESERKNELKKRIMEVETAQVEIENLQKELKENKEKHESVLKETDERRAEALEE
SRALNKKLDALAKCEAELSQEVSNKTSETEQLRGQLESVTSSKNDLAQEVETIKKELGLL
RADHMEKSKKLNEVETEKKTLMEQLDDNKHQLERHKEASMTSEAKYLDLEKQFASANQNA
MAIKMREEKLRLEVEDARMTWKQEEEGHHEKLKEFTRRILDTQKKLNQRENEVKTLTEEL
VSIKRAMDDLNDKSNEQCRNSEVEISSLKAKNEQLECDVTKLTEGINELKEAVESKGNAD
ETEKWKTLYEELLEKVKPFQGQLDAYSAEKAMLLSETSAAQAETTRLGLKYAELLGHQNQ
RQKIKHIVKIKEESVALKQENTKLRNQVSLLTKQVVKSRKPVFDPATAFQHHKENANPN
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtcttttcctagagcggcattaaaaagatttaatgaagcgaaagattctggccctcct
cctggccactacaccgtaaaacagccagaaaagaaccttggaacatttaaatttgagcat
gctggtgaaagatttaaatcaatggagtcaattccagatgaaagtgtacaagctgataat
aatactttcacagctcctgttcccccaataactaacagcaagaaaaagttaaacttttct
ggctcagaaaataaaaagccagaaaaaagaagaacaccagtgaaaagttcacctaatgtt
gtttcaaaagaaaagcaagcctatgaaagggagattcgtcagctgttacagcagtgtagt
gacagggaagccgacatcaaacgtcataaacttgaaatccagcggtttgagggaaaagtt
agcattctaaccaaggataagatttcacttgaaagcaatacaagccttatggagaaaagt
atagcagcactgactaagaaaaatgagtttcttatagctcagtgtgaaaaagagaagaaa
aaggaaaacagtgagttggaccttaaaaaactaaaaactcaaattttgtcaatgaagcag
caaagtgatagagacaaaatgaaaattgccaacttggaggcggacctggatgctgctagg
tcaaggattatggctttgcgagatgcaaacaaagtgttagagcaactaaaccttgaaatt
gaaaagcatggaagtgatgtatccgtgcaggtggaaagattacaaggattggtggataaa
ctcagagaagaaaacgctcgacttcaggatgaaggagaagatactaaattaaagctcaca
gagattcaagaagagtttaatgaaaaactacagtgtgtgctccaagaacgtatgaaggaa
tgtgaaaataagacacaggctgccaataagcaagttgcagaattgcaaaccaacatacaa
gatgcagatgcaaagcttgaggaattgtcagaaacagtgaacttattgcagtgtgaaaag
tctgacatgcatgcagtgaatgtaaagttgcaacaacatatatctgaaactgaacaacga
tgtgaaacatttgctgcagaggaaagtgagcgaaaaaatgaattaaagaagagaattatg
gaagtggaaaccgctcaagtggaaattgaaaatcttcaaaaggaattgaaagaaaacaag
gagaagcatgaaagcgttttgaaggagactgacgaaagacgcgccgaagcacttgaagaa
tcaagggctctgaataagaagctagatgcattggcgaaatgtgaagccgaattgtcgcaa
gaagtttccaacaaaacttccgaaaccgaacaacttcgtgggcagcttgagtcggtgacg
tcatctaagaacgatttagcccaagaggtggaaactataaaaaaagagcttggcttgctg
cgtgcggaccacatggaaaaatcaaaaaagctaaacgaagtggaaacagagaagaaaacg
ttgatggaacagttggatgataataaacatcaacttgaaagacacaaggaagcgtcaatg
acgtctgaggcgaaatatctcgatttggaaaagcagtttgcatcagctaatcagaatgct
atggcgataaaaatgcgggaggagaagttgagattggaggtggaggatgcaaggatgaca
tggaagcaggaagaggaagggcatcatgagaaactcaaggagtttacaaggaggattttg
gacacgcagaaaaaactgaaccagcgtgaaaatgaagtgaaaactttaacagaagaatta
gtgagcattaagagagctatggatgatttgaatgataaatccaatgaacaatgtcgaaac
tcggaagttgaaatatcaagtttgaaagctaaaaacgagcaacttgagtgtgacgtcaca
aagctgaccgaaggaattaacgagctgaaggaggcggtagaaagcaagggaaatgcggac
gaaacagaaaaatggaagacattgtatgaggagttattggagaaagtgaagcctttccag
ggtcagcttgacgcctactcagcagagaaagcgatgcttttgtccgaaacatctgctgct
caagctgaaactactagacttggtctaaagtatgcggagttacttggccatcagaaccaa
cggcagaaaattaaacatatcgtgaaaatcaaggaagaaagtgttgcattgaaacaggaa
aacacaaaattgcgaaaccaagtatctctgctgacgaagcaagtcgtaaaatcccgtaaa
cctgtgttcgaccctgctactgcatttcaacatcataaagagaacgccaaccccaactaa

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