Ciona intestinalis (yellow sea squirt): 778638
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Entry
778638 CDS
T01056
Symbol
hex
Name
(RefSeq) transcription factor protein
KO
K08024
homeobox protein HEX
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778638 (hex)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
778638 (hex)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
778638
NCBI-ProteinID:
NP_001071730
Ensembl:
ENSCING00000001270
UniProt:
Q4H3E5
LinkDB
All DBs
AA seq
533 aa
AA seq
DB search
MMQFENPAPATYSSATNGMSSTSAFSTHQPTPFYIDNILGPTPPSTNEESGSMTPQNNVC
EPDHAMSTINSASPNNGINSLMNNQGDLMASHVPCIPEHVSINDGHTLIHNMQPTTSTYV
SSPIRKEQPLGNNYIPSLSPSIDQHCDSPGRLSAINRPLIPTPIQAVQPHHPAGIYPNTY
PRPSRIYEGHTGIHQSPYTSTSIQYSNGSYGGPPGPVHSAAPGPLYSYQRHDYPNWFFDR
QPFNKVSRPMIWGSFVHRTMHKRKGGQVRFSNDQTAELEKKFDGQKYLSPPERKKLAKTL
QLSERQVKTWFQNRRAKWRRLKQDGHEEEKDAEEKTTNKSKSDGGFGEENDNTCEKDEYD
EPDKESKSVDNEQNNIPNETTVNGLPETENKDKINNSDLNDYRLESKNGFESDPTLQISN
FHAPDATNSTRSFNSTTISNTFHRGSTIDQVSSNYYPVQSHHYHNQTSTYHPHQEYAPSI
VTPQLPQPLPPQHQSHPYETYGSVQQQTSPHMSLPASSRVSFAISLPYQPPSQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatttgaaaatcctgcacctgcaacatactcgtccgccactaacggaatgtct
tccactagtgcattctcaactcatcaaccaacgcctttttatatagacaatattcttggt
cccacaccaccttctacaaacgaagaatccggttctatgacaccacaaaataatgtatgc
gaaccagatcacgcgatgtcaactattaactctgcatcaccaaacaatggaatcaattct
ttgatgaacaatcaaggcgatctaatggcatcacatgttccatgtattccagaacacgtg
tctataaacgatggacatacattaatacataacatgcaaccgacaacttccacctacgtt
tccagtcctatcagaaaagaacagccgttgggtaacaactacattccttccttgtctcca
tcaatagaccagcattgcgattcgccaggacggttatcagccattaatcgacctcttata
cctacacccattcaagcagttcaacctcatcacccagctggtatttacccaaacacctat
cctagaccttctaggatttatgaaggacatactggtatccatcaatcgccatacacatca
acgtcaattcaatacagcaatggtagctatggtggaccaccagggcccgtacattctgcc
gcgccagggccactttattcataccaacgacatgattatccgaactggtttttcgatcgc
cagccatttaataaagttagtcgtcctatgatatggggatcatttgtacatcgcaccatg
cacaaacgaaaaggtggacaagttagattttcaaacgaccaaacagctgaactggagaag
aagtttgatggacaaaagtatttatctccccccgaacgaaaaaagctggcgaagacactt
cagctatcagagcgtcaggtaaaaacatggtttcaaaatcggcgggcaaaatggcgtcga
ctaaaacaagatggtcacgaggaagagaaggacgcggaagaaaaaacaacaaacaagtca
aaaagtgatggtggttttggagaagaaaatgacaatacttgcgaaaaagacgaatatgac
gaacccgataaagagagtaaaagtgtcgataatgaacaaaacaatattccaaatgaaact
actgtaaatggattaccagagacagaaaataaggataaaataaacaatagtgatttgaat
gattacaggttagaatcaaagaatggcttcgaatctgacccaaccctacaaataagtaac
tttcacgcaccagatgccacaaactcaacaagatcttttaattcaactacaatctccaat
acatttcatcgaggttccaccatagatcaagtgtcatcaaattattatcctgtgcagagt
caccattatcataaccaaacctcgacttaccatccacatcaagaatacgcgccctcgatc
gtgacacctcagctccctcagccactccctcctcaacaccaatcacacccgtatgaaact
tatggttcagtgcagcaacaaaccagcccgcatatgagtcttcctgcttcatctcgtgta
tcgtttgctatcagtttgccgtaccaaccaccttctcagtaa
DBGET
integrated database retrieval system
