Ciona intestinalis (yellow sea squirt): 778839
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Entry
778839 CDS
T01056
Symbol
ic1
Name
(RefSeq) axonemal outer arm dynein intermediate chain 1
KO
K11143
dynein axonemal intermediate chain 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
778839 (ic1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
778839 (ic1)
04812 Cytoskeleton proteins [BR:
cin04812
]
778839 (ic1)
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Dynein arm
778839 (ic1)
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
778839 (ic1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
MIOS_WD40
Fer4_15
Motif
Other DBs
NCBI-GeneID:
778839
NCBI-ProteinID:
NP_001071889
Ensembl:
ENSCING00000007029
UniProt:
Q2PEE4
LinkDB
All DBs
Position
7:2673079..2675155
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AA seq
594 aa
AA seq
DB search
MEIVYVYTKKRSEFGRQCNFADRPAELHVDVVPDPTLTTEFIERDPCDTAVQCAQEMSEH
EVNTERFETESRGINHMEGGWPKDINPSEVEQTIRFRKKVEKEEHYVNTLQQLGSVMEHC
IKQNNAIDIYEEYFVNTEIESTEEPPSAKTINVFRDPNEIKRTATSLSWYPDGGKKLAVA
YSNLEFQRSSPDTSFDSYIWDIENPNKPELTLKPVSPLVSLEYNPKDSHVLVGGCYNGQI
AFWDTRKGSHPVEMSPIEQSHRDPVYKTIWLQSKTGTECFSSSTDGQVLWWDIRKLGEPT
EKLVLDPTRKLNIENALGGISLEYEPTMPTKFMVGTEQGSIVSCNRKAKTLAEKIVCLYP
GHYGPVYSLQRNPFFPKNFLTVGDWTARIWSEDIREACIMWTKFHMSYLTDGQWSPVRPA
VFFTTKMDGTLDVWDYLFKQNDPTLSIQVCDEAVHSLRIQDNGRIVACGSHTGTTTLLEL
SSGLCTMQKNEKNLVSSMFERETKREKILEARHREMRLKERTQSQQGSRAEEDAAAPVDE
EEKELIERAETEFSKAIEAEKKSAAGRQVEEIEEAREKASEEPNEKLEPPAEEE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtttacgtctacacgaaaaaacgctccgagttcggtcggcaatgcaatttc
gccgaccgcccggcagagcttcacgtcgacgtggtgccagaccctacattaacgaccgag
ttcattgaaagagacccgtgcgacacggccgtgcaatgtgcgcaggaaatgtcagagcat
gaggtgaacacagaacgatttgagacggagagtcgtgggattaaccacatggaaggagga
tggccaaaagacatcaatccttcagaggtggagcagaccatcaggttccgaaagaaagta
gagaaagaggagcattacgtcaacaccctacagcagcttgggagtgttatggagcactgt
ataaagcaaaacaacgcaattgacatttatgaggagtactttgttaacactgagattgaa
tcaaccgaagaaccaccatcagcaaaaaccatcaatgtgttccgagatcccaatgaaata
aagaggacagctacatcactatcttggtatccggatggtgggaagaagttagctgtcgct
tactccaacctggaattccaaaggtcttcacctgatacatcatttgactcttacatctgg
gacattgaaaatccaaacaagcctgagcttacattgaagcctgtatcccctcttgtatca
ctcgaatataacccaaaagattcccatgttttagttggtggatgctacaatggacagatc
gcattctgggacacaaggaaaggaagtcaccctgttgaaatgtcacctattgaacaaagt
catcgtgacccagtatacaaaaccatttggctgcaatcaaagacaggaactgaatgtttc
tcatcttctacagacggccaggtgctatggtgggacatcaggaagctaggagaaccaact
gagaaattggtgcttgatcctactcggaagttaaatatagaaaacgcacttggaggaatt
tctcttgagtatgaacctaccatgccaactaagttcatggtaggcactgagcaaggatct
attgtttcttgcaacaggaaagcaaagacactagcggaaaagattgtttgcttataccct
ggacactacggcccagtatacagcttgcagaggaatccattctttccgaaaaactttctc
actgttggagattggacagccaggatctggtcagaggatatcagggaggcttgcattatg
tggacaaagttccatatgtcttacctcactgatggtcagtggagtcctgtgcgcccagct
gtcttctttaccactaaaatggatggcactctggatgtgtgggattacttattcaagcaa
aatgatccaacattgagtatccaggtgtgcgatgaggcagtgcatagtctaaggattcag
gataacggaaggattgtggcttgtgggtcgcacacaggaaccacaactcttcttgagctg
tcttccggactctgcacgatgcagaagaacgagaagaaccttgtgagcagcatgtttgag
cgcgagacaaaacgtgagaagatcttggaagctcgacacagggagatgaggctcaaggag
cgcacgcagtcccagcaaggatcaagagcagaagaggatgcagctgctcctgtggatgaa
gaagagaaggaactcatcgaaagagcagaaacagagttctccaaagccattgaggcagag
aagaagtctgctgctggaagacaagtagaagagattgaagaggcgagagaaaaagcttca
gaagaaccgaatgaaaaactggagccacctgcagaggaagaataa
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