Citrus sinensis (Valencia orange): 102609249
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Entry
102609249 CDS
T02983
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12119
cryptochrome 2
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
102609249
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
102609249
NCBI-ProteinID:
XP_006489737
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All DBs
Position
1:join(19216520..19216829,19217159..19217380,19218337..19219043,19219234..19219912,19220734..19220750)
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AA seq
644 aa
AA seq
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MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYIWCPKEEGQFYPGRVSRWWLKQSLS
YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE
LGISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTI
DGCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNST
SLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNF
PFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSS
FAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFD
PEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQA
IFKMWEMEAADNATDSNGTNEVVFDNSDRIQTPAIPQVVLREKSTCPTISSNDQKVPSFQ
NGKNNLPSRKRPKNVEEERQYPDELYSCKNEAGNSGAHDDFCSTAESSAAKRQTTTNISF
SVPHSFSLSEGKALQEYRSSDVNRPWQEQIDREQNSSNDGAMRY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaataggaccatagtatggtttagaagggatcttaggattgaggacaatcct
gcattagctgctgctgcaagggatggcagcgtttttccagtctatatatggtgccctaaa
gaagaaggacaattctacccaggtcgggtatcaaggtggtggctgaagcagtctctttct
tacttgggacaatcactaaaatctcttggtgctgaacttgtgctgttcaaaaccgagagt
actcttgctgctcttttggagtgtatcagtgccattaaggcgacaaaagtagtattcaac
catctttatgatcctgtgtcgcttgttcgtgatcacagcatcaaagaaaagctggtggag
cttggtatttcagtgcaaagttataatggagatttgttatatgaaccttgggagatatat
gatgagagaggacatgcttttacaacttttgatgcatattgggataagtgtttgcagatg
caaatggaacctgcttcaattcttcctccatggcgtttggtgcaagctgcaggaaccatt
gatggatgttctattgaggatttaggtcttgaagatgaatctgaaaaatcaagtaatgcc
ttattaggaagaggatggtctccaggttggagcaatgcagataaggttctgactgaattt
gttgaacagcacctccttcgctattataagaataggcaaaaacttggagggaactccact
tcacttttgtctccgtatcttcattttggagagctaagtgtgaggaaggtttttcaatgt
ttatggatgaagcagatattgtgggcaaaagaagagaactttgaaggaaaagagagtgtg
accttttttcttagggccatgggacttagagaatattcccgatatctatgttttaacttt
ccattcactcacgagagaccattactgagtaacttgaaatactttccttggcatgctgac
ttgggtaattttaaggcttggagacagggtagaactggttacccactggtggatgctgga
atgagagaactctgggctacgggctggatacataacagaataagagtgatagtttcaagt
tttgcggtgaaggtcctgcttcttccgtggagatgggggatgaagtacttttgggacact
cttttggatgctgatctggaatgcgacatccttggttggcagtatatctctgggagctta
ccggacggccatgagcttgaacgattagacagcccagagattcaagggtcaaaatttgat
ccggagggtgagtatgtaagacagtggctacctgagctagcaagaatgccaacagagtgg
atacatcatccttgggacgcgcccccgaatgttcttaaagctgctggggttgagttggga
ttaaactatccaaaacctattattgatttagacttgggtagagaacgtttaactcaagct
atattcaagatgtgggaaatggaagctgctgacaatgctacagactcaaatgggacaaat
gaagttgtttttgataattctgatcggattcaaactccggccattccacaagttgtcttg
agggaaaagagcacttgtccaactatttcatctaatgatcagaaggtgccctcgtttcag
aatggcaagaataatctacctagtagaaagagaccaaaaaatgtggaagaagaacggcaa
tacccagatgaattgtatagttgcaagaacgaagctgggaactctggagcacatgacgac
ttctgctccacagctgaatcttcagcggctaagaggcaaaccacgaccaacatttcattt
tctgttccccactctttttctttgtcagaagggaaggctttgcaagagtaccggtcttct
gatgtcaaccggccatggcaagaacaaattgacagagaacagaattcaagcaatgatgga
gctatgagatattaa
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