Citrus sinensis (Valencia orange): 102610567
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Entry
102610567 CDS
T02983
Name
(RefSeq) replication protein A 32 kDa subunit B isoform X1
KO
K10739
replication factor A2
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03030
DNA replication
cit03420
Nucleotide excision repair
cit03430
Mismatch repair
cit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102610567
03420 Nucleotide excision repair
102610567
03430 Mismatch repair
102610567
03440 Homologous recombination
102610567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cit03032
]
102610567
03400 DNA repair and recombination proteins [BR:
cit03400
]
102610567
DNA replication proteins [BR:
cit03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102610567
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102610567
MMR (mismatch excision repair)
102610567
DSBR (double strand breaks repair)
HR (homologous recombination)
102610567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
RPA_C
RMI2
tRNA_anti-like
Stn1
tRNA_anti_2
Phage_int_SAM_5
Motif
Other DBs
NCBI-GeneID:
102610567
NCBI-ProteinID:
XP_006474189
UniProt:
A0A067DLJ6
LinkDB
All DBs
Position
9:complement(join(32232440..32232521,32232627..32232695,32232989..32233056,32233152..32233226,32233362..32233440,32234096..32234173,32234445..32234486,32234594..32234691,32234775..32234879,32235303..32235404))
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AA seq
265 aa
AA seq
DB search
MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA
SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY
VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS
NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLME
ALESLNENSLVYSIDEFHYKSAVNA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaggcgaattcgacggagctgccgcctttgccggcggtggatttatgccgtct
caggccaccactgttcctgatccctcctcttctttctctaaaaatcgtaatgtgcggacc
ttgctgccgatgactgttaaacaattaagtgaattatcaagtaatgatgaatcgagtgct
agcattgatggagcagatgtcaacactattacagttgtggggatagtttgtgatatgcaa
gacaaagaacctcagtttatattccttattgatgatggcactggacggattgagtgcagt
agatgggctcatgaacagatggagttcaatgaagtgaatcaaatctcgaaaggaatgtat
gttcgtgtttatggacacttgaaggcttttcaggataaaagaagcttaaatgcatactcc
cttcggcctatcattgactttaatgagattacaagccatttcgtcgagtgtatatatgtc
caactctacaacaccaggttacggggtggcagcagtaatcaaccccagatgacaaattct
aaccatttgaaggaatacaatgctatttcctctaatcactatagctttgatgaaggaaag
agcattgatcagatggtgttagactttttgagaagacctgagtttcttgcaaataacaat
ggagttcatcgcaatgtgatttctcaacagctaaatctgccaatggataagctcatggaa
gctttagaatctcttaacgaaaatagcttggtttactcaatcgatgagtttcactataaa
tcagctgtcaatgcatga
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integrated database retrieval system
