Citrus sinensis (Valencia orange): 4271184
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Entry
4271184 CDS
T02983
Symbol
rpoA, CisiCp054
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4271184 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
4271184 (rpoA)
03400 DNA repair and recombination proteins [BR:
cit03400
]
4271184 (rpoA)
Enzymes [BR:
cit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4271184 (rpoA)
Transcription machinery [BR:
cit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4271184 (rpoA)
DNA repair and recombination proteins [BR:
cit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4271184 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
4271184
NCBI-ProteinID:
YP_740508
UniProt:
Q09ME5
LinkDB
All DBs
Position
CP:complement(82094..83080)
Genome browser
AA seq
328 aa
AA seq
DB search
MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT
CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQD
ILLPPSVEIVDNTQHIASLTEPIDLSIGLQIERSRGYNIKTPNTFQDGNCYPIDAVFMPV
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAEDENLPL
ENNQYKVTLPFFTFHDRLAKLTKKKKEIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLL
NTRQEDLMKIEHFRIEDVKQIMSILEKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaaaagtatctactcggacactacagtggaagtgtgttgaatca
agagcagacagtaagcgtctttattatgggcgctttattttgtctccacttatgaaaggt
caagccgacacaataggcattgcgatgcgaagagttttgcttggagaaatagaaggaaca
tgtattacacgcgcaaaatctgaaaaaattccacacgaatattctaccatagtgggtatt
caagaatcggtacatgaaattttaatgaatttgaaagatattgtattgagaagtaatctt
tatggaacttgtgacgcgcttatttgtgtcaaaggcccgggatatgtaactgctcaagac
atcctcttgccgccttctgtggaaatcgttgataatacgcagcacatagctagcctaaca
gaaccaattgatttgtctattggattacaaatcgagaggagtcgaggatataatataaaa
acgccaaatacctttcaagacggaaattgttatcctatcgatgctgtattcatgcctgtt
cgaaatgcgaatcatagtattcagtcttatgggaatggcaatgaaaaacaagagatcctt
tttctagaaatatggacaaacggaagtttaactcctaaagaagcacttcatgaagcctcc
cggagtttgattgatttatttattccctttctccaggcagaagacgaaaacttaccttta
gagaacaatcaatacaaggttactttacccttttttacttttcatgatagattggctaaa
ctaacgaaaaagaaaaaagaaatcgcattgaaatcgatttttattgaccaatcagaaatg
tctcccaggatctataattgtctcaaaaagtccaatatacatacattattcgaccttttg
aatacgcgtcaagaagaccttatgaaaattgaacactttcgcatagaggatgtaaagcag
ataatgagtattctagaaaagaaatag
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