Campylobacter jejuni subsp. jejuni 81-176: CJJ81176_1223
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Entry
CJJ81176_1223 CDS
T00461
Name
(GenBank) HD/HDIG/KH domain protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cjj
Campylobacter jejuni subsp. jejuni 81-176
Pathway
cjj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJJ81176_1223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjj03019
]
CJJ81176_1223
Messenger RNA biogenesis [BR:
cjj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJJ81176_1223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
DUF3450
KhpA-B_KH
MurD-like_N
dUTPase
MS_channel_1st_1
DUF3573
Motif
Other DBs
NCBI-ProteinID:
EAQ72247
UniProt:
A1W0J3
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All DBs
Position
1139162..1140715
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AA seq
517 aa
AA seq
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MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAIEYEAELILKDAKNSIL
NAELEVKKKYEEKTHKIQKDFNQKFDDLSKKEQKLQQEEEKLKEDKEYLCKSQKHIQNLQ
SDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKVEENSREQIAHIVRKYEEEAK
NEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDELKGRIIGKEGRNVKTLEMVLGVD
IIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRIQPARIEEIHEKVCKEFDSAILEEG
ETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDENLARR
AGILHDIGKALTHDFEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEATSIESAAVCAA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKEGIKNAYAINAGREIRVIANAQLVNDDE
SVLLAKEIAAEIQEKMQYPGEIKVNVIRELRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatcacttatcgcacttatagccgctatagtcggactcggtataggatattta
gttgcaaaaaaaatcaatgatgccaaatatgaaattttcgtagaacaagccaaagctaaa
gccaaagctatagaatacgaagcggagcttattttaaaagatgcaaaaaattcaattctt
aatgcagaattagaagttaaaaaaaaatacgaagaaaaaactcacaaaattcaaaaagat
tttaatcaaaaatttgatgatctttctaaaaaagaacaaaaacttcagcaagaagaagaa
aaactaaaagaagataaagaatacctttgcaagtcacaaaaacacattcaaaacttacaa
tctgatgttgataaattaaaaaataaatatcaagaaaaacttgacgatgttttaaaaatt
ttagaacattcgacaggacttacacaaaatgaagccaaagaaatcattcttaaaaaagta
gaagaaaattctcgcgagcaaattgcacatatagtaagaaaatatgaagaagaagcaaaa
aatgaagctaaaagaaaagctaatttcatcattgctcaagctacttctcgttttgcaggt
gaatttgcagctgaaagacttatcaatgttattaacattaaaaacgatgaacttaaagga
cgtatcattggtaaagaagggcgcaatgttaaaaccttggaaatggttttaggtgttgat
attatcatcgatgatacaccaggtgctattatagtaagttgttttaatctttatcgccgt
gctattgctacaaaagttatagaacttttagttgaagatggcagaattcaacccgcgcgc
atagaagaaattcacgaaaaagtgtgtaaagaatttgatagtgccattctagaagaaggc
gaaaccatagttatggatctaggtttaaataaaatacaccctgaaattgtaaaactcata
ggaaaactcaaataccgagcaagctatggacaaaacgctttagcacattctttggaagtg
gctcaccttgcaggaatcattgctgctgagtgtggtggagatgagaatttagcacgtcgt
gcgggaattttacatgatataggaaaagcattaacccatgattttgaaggatctcatgtg
gatttaggtgcagaactttgcaaacgctacaaagagcatcctgtagtaatcaatgctatt
tacgcacatcatggacacgaagaagctacaagcatagaatcagcagctgtttgtgcagca
gatactttaagtgctgcacgacctggagctagaagagaagtgttagaagctttcttaaaa
agagtcagtgagctagaagatatcgctaaaagtaaagaaggaattaaaaatgcctatgca
atcaatgccggaagagaaattcgcgtcatagccaatgctcagcttgttaatgatgatgaa
agtgtacttttagctaaggaaatagcagctgaaattcaagaaaaaatgcaatatcctggt
gaaattaaagtcaatgttatacgtgaacttagagctgtagaatacgctaaataa
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