Comamonas kerstersii: B5M06_07025
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Entry
B5M06_07025 CDS
T04758
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cke
Comamonas kerstersii
Pathway
cke03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5M06_07025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cke03021
]
B5M06_07025
03400 DNA repair and recombination proteins [BR:
cke03400
]
B5M06_07025
Enzymes [BR:
cke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5M06_07025
Transcription machinery [BR:
cke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5M06_07025
DNA repair and recombination proteins [BR:
cke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5M06_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AQZ98042
UniProt:
A0A0W7YZC0
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All DBs
Position
1501114..1502112
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AA seq
332 aa
AA seq
DB search
MQTNLLKPKTINVEQLGHNRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
INPDHVIANLSQGGKLDMQIKVEKGRGYVPGNLRRYSDESTKSIGRIVLDASFSPVRRVS
YTVESARVEQRTDLDKLVVEIETNGAIGAEDAVRASAKILVEQLAVFAQLDGEFAEGGIL
QAGGSRSSAQTFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGR
KSLNEIKEVLASRGLTLGMKLENWPPAGLEKR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatctgctgaaacccaagacgattaatgtcgagcagcttggtcacaatcgt
gccaaggtgacgctggagccttttgagcgtggctatggtcatacgctgggcaatgcattg
cgccgcgtactgctgtcgtccatggtgggttacgcagcgacggaagtcacgattgctggc
gttctgcatgagtactcgtccatcgatggcgtgcaagaagatgtggtgaacatcctcctg
aacctgaagggcgtggtgttcaagctgcacaaccgtgacgaagtaacactgagcctgcgc
aaggatggcgaaggtgtagtgactgcgcgtgacatccagactccccatgacgttgagatc
atcaatcctgaccacgtgatcgccaacctgtcgcaaggcggcaagctggatatgcagatc
aaggtggaaaagggccgtggctatgtgcccggtaacctgcgtcgctacagcgatgagtcg
accaagtcgattggccgcatcgttctggacgcatcgttctcgcccgttcgtcgcgtgagc
tataccgtcgaatctgctcgtgtggagcagcgtaccgacctggacaagctggttgtcgaa
atcgaaaccaacggtgctatcggtgcagaagatgcagtgcgcgcatctgccaagatcttg
gtggaacaactggctgtattcgcacaactggatggcgaattcgccgaaggtggcatcctg
caggctggcggcagccgttcgagcgcccagaccttcgatcctatcctgctgcgtcctgtg
gacgagctggaactgaccgtccgttctgcaaactgcctgaaggcagaaaacatctactac
atcggtgatctgattcagcgcaccgagaacgagctgctcaagacacctaacctgggtcgc
aagtcgctcaacgaaatcaaggaagtgctggcttcccgcggtctgactctgggcatgaag
ctcgagaactggccaccagcaggtctggaaaagcgttaa
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