KEGG   Comamonas kerstersii: B5M06_07025
Entry
B5M06_07025       CDS       T04758                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cke  Comamonas kerstersii
Pathway
cke03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B5M06_07025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cke03021]
    B5M06_07025
   03400 DNA repair and recombination proteins [BR:cke03400]
    B5M06_07025
Enzymes [BR:cke01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B5M06_07025
Transcription machinery [BR:cke03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B5M06_07025
DNA repair and recombination proteins [BR:cke03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B5M06_07025
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: AQZ98042
UniProt: A0A0W7YZC0
LinkDB
Position
1501114..1502112
AA seq 332 aa
MQTNLLKPKTINVEQLGHNRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
INPDHVIANLSQGGKLDMQIKVEKGRGYVPGNLRRYSDESTKSIGRIVLDASFSPVRRVS
YTVESARVEQRTDLDKLVVEIETNGAIGAEDAVRASAKILVEQLAVFAQLDGEFAEGGIL
QAGGSRSSAQTFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGR
KSLNEIKEVLASRGLTLGMKLENWPPAGLEKR
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcaaacaaatctgctgaaacccaagacgattaatgtcgagcagcttggtcacaatcgt
gccaaggtgacgctggagccttttgagcgtggctatggtcatacgctgggcaatgcattg
cgccgcgtactgctgtcgtccatggtgggttacgcagcgacggaagtcacgattgctggc
gttctgcatgagtactcgtccatcgatggcgtgcaagaagatgtggtgaacatcctcctg
aacctgaagggcgtggtgttcaagctgcacaaccgtgacgaagtaacactgagcctgcgc
aaggatggcgaaggtgtagtgactgcgcgtgacatccagactccccatgacgttgagatc
atcaatcctgaccacgtgatcgccaacctgtcgcaaggcggcaagctggatatgcagatc
aaggtggaaaagggccgtggctatgtgcccggtaacctgcgtcgctacagcgatgagtcg
accaagtcgattggccgcatcgttctggacgcatcgttctcgcccgttcgtcgcgtgagc
tataccgtcgaatctgctcgtgtggagcagcgtaccgacctggacaagctggttgtcgaa
atcgaaaccaacggtgctatcggtgcagaagatgcagtgcgcgcatctgccaagatcttg
gtggaacaactggctgtattcgcacaactggatggcgaattcgccgaaggtggcatcctg
caggctggcggcagccgttcgagcgcccagaccttcgatcctatcctgctgcgtcctgtg
gacgagctggaactgaccgtccgttctgcaaactgcctgaaggcagaaaacatctactac
atcggtgatctgattcagcgcaccgagaacgagctgctcaagacacctaacctgggtcgc
aagtcgctcaacgaaatcaaggaagtgctggcttcccgcggtctgactctgggcatgaag
ctcgagaactggccaccagcaggtctggaaaagcgttaa

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