Caldicellulosiruptor kronotskyensis: Calkro_1421
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Entry
Calkro_1421 CDS
T01357
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn00550
Peptidoglycan biosynthesis
ckn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Calkro_1421
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ckn01002
]
Calkro_1421
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ckn01011
]
Calkro_1421
Enzymes [BR:
ckn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Calkro_1421
Peptidases and inhibitors [BR:
ckn01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Calkro_1421
Peptidoglycan biosynthesis and degradation proteins [BR:
ckn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Calkro_1421
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ADQ46277
UniProt:
E4SC42
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All DBs
Position
complement(1594145..1595269)
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AA seq
374 aa
AA seq
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MKARVFVLIFALIITTAFGKICYANEKKNLPQLSSKSAIAIEWVTGKILFEKNKDLKLPM
ASTTKIMTAILVLENCDVNKEIEIPPQAVGVPGSSMYLEKGEKLKIIDLLYGLMLSSGND
AAVALAIATAGDVKRFVKLMNKKAKDLGLSNTVFSSPHGLEQGQHYTTAHDLAKLTAYAM
RNPIFRQIVKTKDIEVPWTTRPYNRILRNKNKMLRLYPGADGVKTGFTKKAGRCLVTSVC
RDDFRVICVVLNAPDMWNDTQKILNYCYNNFKVVKLLPDEMGYVKVKNGKSDWVKVGTTY
KCYWVVESSCLPKLDVILQVAEAPIEKNKVIGRLNVYLKNEKQSLPLVALQECPRKSLWD
RIKEKLFENRIRQK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagggtatttgttcttatatttgcattaataataactacagcatttggtaag
atatgctatgcaaatgaaaaaaagaatttaccacaactgagctctaaatctgcaatagct
attgaatgggtaacagggaagattctctttgaaaaaaacaaggatttaaaacttccaatg
gcaagcacaaccaaaataatgacagcaatcctggtgttagaaaactgtgatgtaaataaa
gaaattgaaattccgccacaggctgtgggagttccagggtcatctatgtacctcgaaaaa
ggagaaaaactgaaaataatagaccttttatatggacttatgctttcttctgggaatgat
gctgctgtcgccttggcaatagcaacagctggtgatgtaaaaagattcgttaaacttatg
aacaagaaagcaaaagatcttggcctttcaaacactgtattttcatctccacatggcttg
gaacaaggtcagcattatacaacagctcacgaccttgcaaaacttaccgcatacgctatg
agaaatccaatatttcgacagatagtaaaaaccaaagatatagaagtaccatggactaca
agaccttacaatagaattctaagaaacaaaaacaagatgttaagattatatcctggtgct
gatggtgtaaaaactggatttacaaaaaaggcgggtaggtgtcttgtcacttctgtttgc
agagatgattttagagtcatatgtgtggttttgaatgctccggatatgtggaatgatacg
caaaagattctcaactattgttataacaactttaaagtggtaaaacttctacctgatgaa
atgggttatgtaaaagttaaaaacggaaaaagtgattgggtaaaagttggaacaacatat
aaatgttattgggtagtggaatcaagttgtttgccaaaattagatgtaattttgcaggta
gcagaagcgcctattgaaaaaaacaaggtgattggtaggttgaatgtgtatcttaaaaat
gaaaaacagagcctcccacttgttgcattacaagaatgtccaagaaagtctttatgggac
agaataaaagaaaaattgtttgaaaatagaattagacaaaaataa
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