Clostridium sp. SY8519: CXIVA_06410
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Entry
CXIVA_06410 CDS
T01565
Symbol
TruA
Name
(GenBank) pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cls
Clostridium sp. SY8519
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cls03016
]
CXIVA_06410 (TruA)
Enzymes [BR:
cls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CXIVA_06410 (TruA)
Transfer RNA biogenesis [BR:
cls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CXIVA_06410 (TruA)
Prokaryotic type
CXIVA_06410 (TruA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
YiiM_3-alpha
Motif
Other DBs
NCBI-ProteinID:
BAK46608
UniProt:
F7V8Z8
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All DBs
Position
complement(683455..684207)
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AA seq
250 aa
AA seq
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MKRIRLKVAYDGTNYCGWQIQKNGPTIEGELQKALKSLLGQDVRLTGASRTDAGVHSQGN
IAVFDTEAKMPADKYAVALNQRLPEDIAVTDSCCVPGDWHPRHCESVKTYEYRILNRRYP
DPNRRLNTYFYYRPLDLEAMRQAAAALEGTHDFRSFCSVHAQVETTVRTLYSCRVDRRED
VVTIRVSGSGFLYNMVRIIAGTLIRVGSGQMAADAVPGILAACDREKAGPTAPPQGLTMI
GIDYPQEAEE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaattcggctgaaagtagcctatgacggaacaaattactgcggctggcagatt
cagaagaacgggccgaccattgaaggagagctgcagaaagcactgaagagtctgctggga
caggatgtgagactgaccggcgccagcagaacggacgcaggcgtccattcccagggaaat
atcgccgtctttgacacggaggcgaaaatgccggcagacaaatacgcggtggcactgaac
cagcgcctgccggaggacatcgcggtgacggactcctgctgtgtgcccggagactggcat
cccagacactgtgaaagtgtgaaaacctatgaataccggatcttaaaccgcagatatccg
gatccgaaccggcgtctgaatacgtatttttattaccgccccctggatctggaggccatg
aggcaggcagcggcagcgctggaaggcactcatgatttccgctccttctgttcggtgcat
gcccaggtggagacgacggtgcgcaccctgtattcctgccgggtcgaccggcgggaggat
gtggtgaccatccgggtaagcggcagcggatttctttataacatggtccgcattattgcg
ggaacactgatccgggtaggcagcggacagatggcagctgatgcggttcccggcattctg
gcagcctgtgacagggaaaaagcgggtcctaccgcgccgccccaggggctgacaatgatc
ggaattgactatccgcaggaagcagaggagtga
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