Columba livia (rock pigeon): 102098157
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Entry
102098157 CDS
T02912
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102098157 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102098157 (ARID1A)
03021 Transcription machinery [BR:
clv03021
]
102098157 (ARID1A)
03036 Chromosome and associated proteins [BR:
clv03036
]
102098157 (ARID1A)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Helix-turn-helix
ARID
102098157 (ARID1A)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102098157 (ARID1A)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102098157 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102098157
NCBI-ProteinID:
XP_005500720
UniProt:
A0A2I0LLT0
LinkDB
All DBs
Position
Unknown
AA seq
1914 aa
AA seq
DB search
MFVHNYLCFACRCYHTVYTFMPVPSSPMDQMGKMRPQPYGGNNPYTQQQGAQAGPQPGHG
YPGQPYGPQAPQRYPMGMQSRTQSAMGGLSYAQQIPPYGQQGPSAYGQQSQTPYYNQQSP
HPQQPQAPYSQQPPSQTPHAQPSYQQQQQPQSQPPQLQPAQPYPQQPAQPPHQSPTPYPQ
AQPAAPQHQQNQPPYAQQQAQSPYQQQQQTPQAASSALSQQSSSYPPSQASQQQSAYSQQ
RFPPPQELSQDSFGSQASSAPSMASSKGQDDMNLNLQSRPSSLPDLSGSIDDLPMGTEGA
LSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSP
AAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQS
SGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNTNYPSPGMGGSMNPMG
AGSQMHGQSGVPPYSGLPPGRMSHGAMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKAPA
AMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSA
GMAASPEMMGLADVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPE
RKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATN
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSG
SMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQ
KRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPY
NRAAGPGMGNMAMGQRQHYSYGAPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYS
PSRYPQQQQQQQRHDSYGNQFSTQGTSSGTPFPSQQTTMYQQQQQNYKRAMDSTYGPPAK
RHEGEMYNVPYSAGQGQTQQQLPPAQSQQPSQQQTAQPSPQQDLYNQYGSTYPAAHRGAA
GGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQSAPEGPQQGAMWQGRNEIGYSY
PNRQSAGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSATVPPMTRPP
QSNYQAPPSMQNHIPQVSSPAPLPRPLENRTSPSKSAFMHSGMKMQKAGPPVPASHITPA
AVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWAL
DTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPE
RFRKSSASSHEEGEEDDEPRSMNCEEEEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKL
PVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRA
PCAASTRKRSAAEISPSTRDGETAPSDSSSEKRITATMDDMLSARPGSLPGEEEELKASE
TTKESGKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSL
SFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWD
CLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAV
LSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGTLVRFLSDRKNPVCREMAVVLL
ANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMM
RRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtccacaactacctgtgctttgcgtgcaggtgctatcacaccgtgtataccttc
atgccggtgccttcaagcccgatggatcagatggggaagatgaggcctcagccgtacgga
ggaaacaacccgtacacgcaacagcagggagctcaggcggggccgcagccaggacacggc
tacccgggacagccctacggaccacaggctccccagagataccccatgggcatgcagagc
cggacacaaagcgccatgggcggcctctcatatgcacagcagattcctccttacggacag
cagggccccagtgcgtatgggcagcaaagccagactccgtactacaaccagcagagccct
cacccccagcagccgcaggctccgtactcgcagcagccgccctcgcagaccccgcacgct
cagccttcctatcagcagcaacaacagcctcagtctcagccgccccagctccaaccggcg
cagccgtacccccagcagccggctcagccgccccatcagtccccgaccccgtatccccaa
gcgcagcctgcagccccacagcaccaacagaaccagccgccctacgcgcagcagcaggcg
cagtcgccctaccagcagcagcagcagacgccgcaggcggcttcctcggctctttcgcag
cagtcgtcgtcgtaccccccgtcgcaggcgtcgcagcagcagtctgcgtactcccagcag
cgcttcccccctcctcaggagttatctcaagactcatttgggtcccaggcatcatctgct
ccctccatggcttccagtaaagggcaagacgacatgaacttgaaccttcagtccagacct
tccagcctgccggacctgtctggttcaatagatgatctccccatgggtacagaaggagcc
ctgagtcctggagtgagcacgtcagggatttccagcagtcaaggagagcagagtaaccca
gctcagtctcctttctctccacatacctctcctcacctgccaggcatcagaggaccctcc
ccatccccagttggatctcctgcgagcgttgctcagtcccgctctggtccgctctccccg
gccgcggttccaggcaatcagatgccgccccgaccgcccagtggccagtcggacagtatc
atgcatccttccatgaaccagtcgagcatagcgcaagatcgaggttacatgcagaggaac
ccgcagatgccccagtacagctccccccagcccggctcagccttatctccccgccagtca
tccggaggacagatgcacgccgggatggggccgtaccagcagaactccatgggcagctac
ggaccccagggtgggcagtatggacctcaaggaggttatccaaggcagccaaactacaac
gcgatgtccaacaccaactaccccagcccaggaatggggggcagcatgaaccccatgggt
gccgggagccagatgcatgggcagagcggcgtgccaccctacagcggccttcctcccggg
aggatgagccacggcgccatggggaacagaccctacgggcccaacatggccaacatgccc
ccacaggtggggtcggggatgtgtccccccccaggcggcatgaaccgcaaagcacctgcc
gccatgcacgcggctgccaactccatccagaacaggcctcctggttatcccaacatgaac
caagggggaatgatgggcactggacctccgtacggacagggaattaacagtatggctggg
atgataaacccccagggcccaccctatcccatgggtgggaatatggcgaacaactctgca
gggatggcagcaagccctgagatgatgggacttgcagatgtcaaactaacgcctgcgact
aaaatgaacaataaggcagatgggacgccaaaagcagaatccaagtcaaagaagtccagc
tcctctactacgaccaacgagaagatcaccaaactctacgagctgggcggggagcccgag
aggaagatctgggtagatcgttacctggccttcaccgaagagaaggccatgggcatgacc
aacctgccggccgtgggcaggaaacccttggacctttaccgactctacgtctccgtgaag
gagatcggaggattgactcaggtcaacaaaaacaagaaatggcgcgagctggccacaaat
ctcaacgtgggcacgtccagcagcgcagcgagctctctgaagaagcagtacatccagtgt
ctgtacgccttcgagtgcaagattgagcgaggtgaagaccctcctccggatatctttgca
gctgccgattcaaagaagtctcagactaagatacagcctccgtctccagcgggttcaggc
tcaatgcagggacctcagacacctcagtccaccagcagctccatggcagaaggaggagac
ctgaagccaccaactccagcgtctacgccacacagccagatgccccctttgccaggcatc
aggagtaactcagtgggccttcaggatgcctttgcagatggcagtgatcctacgttccag
aagcggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatg
atgggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccg
ggaagcgatcccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttac
aaccgtgctgcaggtccggggatgggtaacatggccatgggacagcggcaacactattcc
tacggagctccttacgacagagtcaggacggagcccgggatgggacccgagggcaactta
gcaactggaaccccgcagcccaacatcatgccttccacccccgagtcgggaatgtactcc
cccagccgctacccccagcagcagcagcagcagcaaagacatgattcctatggcaatcaa
ttctccactcaaggcacatcctcgggcacccccttccccagccagcaaactaccatgtac
caacagcaacagcagaattacaagcgagccatggacagcacctacggcccacccgcgaag
cgacacgaaggggagatgtacaacgtcccgtacagcgctgggcagggccagacgcagcag
cagctgccgccagcgcagtcccagcagcccagccagcagcagacggctcagccgtccccc
cagcaggacctgtacaaccagtacgggagcacgtaccccgccgctcaccgcggagccgct
ggggggccgcagaaccagttccccttccagtttggcagagacagggtctctgctcccccg
ggctccaacgctcagcagaacatgccccctcagatgatggggggtcctatccagtcggct
ccggagggtccgcagcaaggcgccatgtggcaggggcgcaatgagatcgggtacagctat
ccaaaccggcagagcgccggctccgcaccccaaggacccgcgtatcacggagtgactcga
acagacgaaattctgcattcagaccagagggtcaaccacgagggaccgtggccatcccac
gggaaccggcaacctccttacggtccctctgccaccgtgccccccatgacaaggcccccc
cagtctaactaccaggccccccctagcatgcagaatcacattcctcaggtatccagccca
gcacctctgcccagacctctggagaaccgcacttctcccagtaaatctgcgttcatgcac
tcggggatgaaaatgcagaaggcgggaccgcccgtccccgcctcgcacatcacaccagca
gctgtacagccgcccatgatccgacgagacatcaccttccctccgggatccgtagaagct
acgcagcctgtgttgaagcagaggagacggctgacggcaaaagatatcggaactcctgaa
gcctggagagtgatgatgtctctgaagtctgggctgctcgctgaaagtacgtgggcctta
gataccataaacatcctgctctatgatgacaacagcatcatgaccttcaacctcagccag
ctgccaggcttgctggaactcttggtggaatatttccggcgctgcctgatcgagatcttt
ggaatcctgaaggaatacgaggtgggagacccagggcaaagaacactattagatcccgaa
aggttccgtaaatcttcagcttcctctcatgaagaaggggaggaggatgatgaaccgcgg
agcatgaactgtgaggaggaagaagaggacgaggaagaggaggaggctgcgttttcgagc
aaggacaaagcacctctagagagcagcgaggaaaaactagttagtaaatttgacaagctt
ccagtcaaggttgtgcagaagaacgacccgtttgtggtagattactcagacaagctgggc
cgagtgcaggagttcgacagcgggctgctgcactggcggatcggcggtggagacaccacc
gagcacatccagacccactttgagagcaagacggagctgcctctgactcataaacgagct
ccctgcgccgccagcaccaggaaacgttcggcggccgagatcagccccagcacgagggac
ggggagactgctccgtccgacagctcctcggagaagaggataacggccaccatggacgac
atgctctcggctcgtcccgggtccctgcccggggaggaggaagagctcaaagcttcggaa
acgacgaaggaaagcggcaagtttccctttggcattagtccggctcagagccacagaaat
ataaaaattctggaggatgaacctcacagtaaagacgagacgcccctctgcacgctcctg
gactggcaggactctctggccaagcgctgcatctgcgtctcgaacatcatcaggagttta
tcgttcgtaccgggcaatgactttgaaatgtccaaacaccccgggctgctgctgattcta
gggaaactgattctcttgcaccacaagcatccggaacgcaaacaggcacccctgacctac
gagaaggaggaggaacaggaccaaggggtgagctgcaacaaggtggagtggtggtgggac
tgcttggagatgctgcgtgaaaacacgctggtcacgttggccaacatttctggccagctg
gacctgtccccctacccggaaagcatctgcttgcccatcctggacggactcctccactgg
gccgtgtgtccatccgcggaggcccaggatcccttcccgacgctgggccccaacgcggtc
ctttcccctcagagactggttttagaaacactcagcaaactcagcatccaggacaacaat
gtggatttgatcctcgcgactccccctttcagtcgcttggagaagctgtacggcaccttg
gtgcgcttcctcagcgacagaaagaacccggtgtgccgggagatggccgtggttctgctg
gccaacctggcgcagggggacagcctggccgccagagccatcgctgtgcagaagggcagc
attggcaacctgctgggctttctggaggacagcctggccgccacgcagttccagcagagc
caggccggcctgatgcacatgcagaacccgcccttcgagtcgacgagtgtggacatgatg
cgccgagccgcccgggcgctgctcgccctggccaaggtggacgagaaccactcggagttc
acgctatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggta
tcacaagtgatttgtgacgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
