Chlorobaculum limnaeum: BIU88_05760
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Entry
BIU88_05760 CDS
T04492
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BIU88_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_05760
Enzymes [BR:
clz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BIU88_05760
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BIU88_05760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOS85023
UniProt:
A0A1D8D3Q3
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All DBs
Position
complement(1306151..1309300)
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AA seq
1049 aa
AA seq
DB search
MATVTPLASPFDREWIVVQSRGMQRWLSMRLAEQFGVWAGAEYPFPNALIQKLFEWLGLS
EKTAGESFSKEAICWSLVRLLPGLLEGDSFAPLRGYLDGDRDGLKLFQLCGRIADTFDQY
TLFRPDLLAAWEAGGDDAARDWQPELWRALVAEIAGKHRGQLQAEFLRKVKGARLPDDFP
KRVSLFGVSYMPPYHVEMLQALAARIPVNLFLLSPTQEFWTDIVSRRRLFRMSESERALS
MEGNPLLASLGKSGREFAELLLDVGNVEDEYDLYDDPGTGTLLRALQSDMLNLRGDGTEE
RHPAPAMDDRSVQVHSCHNPLREVEVLHDNLLDLLDRAAGLEPRDIVVMTPDIETYAPYI
ATVFGASGPGEPRLPHSIADRRMLNEGGVAPAMLKLLELYGSRHTAPVLFDLLSSPPVSR
RFRLGDEELGTVRRWIEQTRIRWGMDERSRGKLGLPPFRENSWRAGLERLLLGYAMPDEG
QLFDGVLPFEVGGVAGDAETLGKLADFIDAVDQLSKRFSRPRPLGEWREHFLWMLDSFIE
ADDDSARELAHVKAEIDRLSALAENSRFDGEISAQVMLAWLRGRLEQFEMGLGFMTGGIT
FCAMLPMRSIPFRVVAMIGMNDGAFPRQQRPPGFDLLAREPRKGDRSVRGDDRYLFLESI
LSARDVLYLSYVGQSVRDNTPLPPSVLVSELLDAVERGFEFPEGDDAASRLVVQHRLQGF
SPAYFTPDAKLFSYSADNFRALVGRNSLSAKPFIEKPLDGFTDEERTVTLDDLARFFANP
AAYFLERRLGLKPSAAAEPLDEREPFEAVGLERYAMRQELLEALLEGGDGRAMLLLFRSR
GLLPPAAHGELLFRKILAEVEEFAAKVQELKGGGAFCQLDLDLDIGGFRLTGTLDHLMPN
GQLLYRCARMRAQDRLRSWLLHLALHAVEKDVTSETRIVTLDRSIRYRPVEGATERLEAL
LDLYREGLSEPLPFFPLASLAWAEKSDKPEAERRKAALGEWLDGFGGREGEGSDPAIRRC
FGEEPPFGERFAAIAEALLQPMIEHGGKG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctacggtcacgccgctcgcgtcgcccttcgaccgtgagtggatcgtcgtgcagagc
cggggcatgcagcggtggctctcgatgcggctcgccgagcagttcggcgtttgggcgggg
gcggagtacccgttcccgaatgcgctgatccagaagcttttcgagtggctggggctgtcg
gagaaaacagcgggcgagagcttctccaaagaggcgatctgctggagcctcgtgcgcctg
ttgccgggcttgctcgaaggcgactcgttcgcgccgctgcgaggctacctcgatggcgac
cgcgatgggctgaaacttttccagctctgcgggcgcattgccgacaccttcgaccagtac
acgctgtttcgccctgatctgctcgccgcgtgggaggcgggcggcgacgatgctgcccgc
gactggcagccggagctgtggcgcgcgctcgtcgcggaaattgcgggcaagcatcgcggc
cagctccaggcggagtttctcaggaaggtgaagggtgcccggttgcctgacgattttccg
aagagggtttcgctcttcggcgtttcgtacatgccgccttatcacgtcgagatgcttcag
gcgctggccgcgcggattccggtcaacctgtttctgctgagcccgacgcaggagttctgg
acggacatcgtttcgcggcggcggctcttccgcatgagcgagagcgagcgggcgctgagc
atggagggcaatccgctgctcgcctcgctcggcaaaagcgggcgcgagttcgctgaactg
ctgcttgacgtgggcaatgtcgaggacgagtatgacctctacgacgaccccggcactggt
acgctgctccgcgccttgcagtccgacatgctcaatctgcgcggcgacggcaccgaggag
cggcatccggctccagccatggacgaccgctcggtgcaggtgcactcgtgccacaatccg
ctacgcgaggtcgaggtgctgcacgacaacctgctcgacctgctcgaccgcgcggcaggc
ctcgaaccgcgcgacatcgtggtgatgacgcccgacatcgagacctacgccccctacatc
gccaccgtgttcggcgccagcggcccaggggagccgcgcctgccgcactccatcgccgac
cgccggatgctcaacgaggggggcgtcgccccggcgatgctcaagctgctcgaactctac
ggcagccgccacaccgcgcccgtgctcttcgacctgctttcgtcgccgccggtgagccgc
cgcttccggcttggcgacgaagaactcggcacggtgcgccgctggatcgaacagacgcgc
atccgctggggcatggacgagcgctcacgcggaaagctagggctgccgcccttccgcgag
aactcgtggcgggccgggctggagcggctactgctcggctatgcgatgccggatgagggg
cagctcttcgatggcgtcctgccgtttgaggtcggtggggtcgctggcgacgccgaaacg
ctcggcaagctcgcggacttcatcgacgccgtcgatcagctctcgaagcgcttcagtcgc
ccgcgaccgctcggcgagtggcgggagcactttctctggatgctcgacagcttcatcgag
gccgacgatgattcggcgcgcgagctggcgcacgtcaaggcggagatcgaccggctcagc
gcgctggcggaaaactcgcggttcgacggcgaaatttcggcgcaggtgatgctcgcctgg
ctacgcgggcggctcgaacagttcgagatgggcctcggcttcatgaccggcggtatcacc
ttctgcgcgatgctgccgatgcgcagcattcccttccgcgtggtggcgatgatcggcatg
aacgacggcgcattcccgcgccagcagcgcccgccgggcttcgacctgctcgcccgagag
ccgcgcaagggcgaccgctccgtgcggggcgacgaccgctacctcttcctcgaatcgatc
ctttcggcccgcgacgtgctctacctgagttacgtcggccagagcgtgcgcgacaatacg
ccactgccgccatcggtgctggtgagcgagctgctcgacgccgtcgagcgcggcttcgag
ttcccggagggcgacgatgccgcgtcacgcctcgtcgtccagcaccggcttcagggcttc
agcccggcttattttacgcctgatgccaagcttttcagctactcggcggacaacttccgg
gcgctcgtggggcgcaattcgctctctgccaaaccgtttatcgagaagccactcgacggt
ttcacagacgaagaaaggacggtcacgctcgacgatctcgcccgctttttcgccaatccg
gcagcgtactttctcgaacggcgtctcggcctgaaaccctcggcagcagcggaaccactc
gacgagcgcgagccgttcgaggcggtgggactcgaacgctacgcgatgcggcaggagctt
ctcgaagcgttgctcgaaggcggcgacgggcgagcgatgctgctgctcttccggtcacgc
ggcctgctgccgccagcggcgcacggcgagctgctcttccgaaagattctcgccgaggtc
gaggagttcgccgcgaaggtgcaagagctgaagggcggcggcgcgttctgccagctcgac
ctcgatctcgacatcggtggcttccgcctcaccggaacgctcgaccacctgatgccaaac
ggccaactgctctatcgttgcgccagaatgcgcgcgcaggatcgcctccgctcgtggctc
ctgcacctcgcccttcacgccgtcgaaaaagacgtgacgagcgaaacgcgcatcgtcacg
ctcgaccgctcgattcgctatcgcccggtcgagggcgcgacggaacggctcgaagcgctg
ctcgacctctaccgcgaaggactttcggagccgctgccattcttccccctcgcctcgctc
gcttgggccgaaaagagcgacaagccggaggctgaacgccgcaaagccgcgcttggcgag
tggctcgacggcttcggcggacgagaaggcgaggggagcgacccggccatccgccgctgc
ttcggcgaagaaccgcccttcggcgagcgtttcgccgccattgccgaagcattgctgcaa
ccgatgatcgagcatggagggaagggatga
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