Caldivirga maquilingensis: Cmaq_0318
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Entry
Cmaq_0318 CDS
T00611
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
cma
Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cma03400
]
Cmaq_0318
Enzymes [BR:
cma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cmaq_0318
DNA repair and recombination proteins [BR:
cma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Cmaq_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
Helicase_C
ResIII
HHH_2
DNA_pol_lambd_f
HHH
SNF2-rel_dom
HTH_61
HHH_8
RNA_pol_A_CTD
POLQ_helical
HHH_3
Sec63
SOCS_box
Motif
Other DBs
NCBI-ProteinID:
ABW01166
UniProt:
A8MB76
LinkDB
All DBs
Position
355222..357492
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AA seq
756 aa
AA seq
DB search
MNIEELPLPSLLRDFLISKRGIRTLYPPQEEAIRAGLLNGENILMVSATASGKTLLAEVA
AVNNVLVNDKKSLVAVPLKALAFEKLNDFNTYSELGIRVAASTGDYNSEDKWLGSYDVII
TTYEKLDSLLRLKPSWIWNVGQLIIDEIHFINDDERGPIIESIVAKLRMLNLNPQIIGLS
ATIGNPEELANWLNAKLVKSDWRPVSLREGVYHKGVVTYVNDGEKRISGQGDSLINLTVD
TLNDGGQVLVFSSSRQGAVRIARKLAEYICSSPVRYIDPGEAGKLAEEVRETSSSRILAE
ELTGLIKCGVSFHHAGLELEVRRVIEEGFRRGVLRVLASTTTLAAGVNLPARRVIVNEYR
RYEPGYGFIEIPVMEYKQMAGRAGRPGLDPYGEAIIIVSSKDEVDYVIDKYIKSPPEYVK
SNFMNPTSLKFHTLSAVASQYAETIDELVKFTSNTFAGFQGKLSAMIQANSVRRMISRII
DELVDYGFIIRNGDKLEATEVGAVVNRMYLDPDTAHVFIMGLRNLNSDADLNAYSLMLVV
KSPKIPKVKVRRNELDELAQQAASMWSSIPLKPSDVDELVNYPEDYEDFLSEFKTAMALL
EWINESNEDQIMKTYDVQPGDLRVLSDQAEWLIGALQELARTLGLSGNVVNGLRALRYRV
KYGVNDELLELVVNLEGVGRVRARALYAAGYRSIEDLAKANVSDLTRIRGIGDKIAGSII
EQAHQLVKDGRVIKFNESTVKGKTRRGGGGLLDHMY
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattgaggagctaccgctaccaagcttgcttagggattttctaataagtaagagg
ggcattaggacactgtacccgccccaggaggaggctattagggctggtttactgaatggt
gaaaacatactcatggtttcagccacagcctcaggtaagacgcttctagctgaagtagct
gctgtaaataatgtactggttaatgataagaagtcactggtggctgttcccctgaaggca
ttagccttcgagaagcttaatgacttcaacacgtacagtgaattaggcattagggtggct
gcctcaacaggtgactataatagtgaggataagtggttaggctcttatgatgtaataata
actacgtacgagaagcttgatagcctactcaggcttaaaccgagttggatatggaatgtt
gggcaattaataattgatgaaatacacttcattaatgatgatgaaaggggaccaataata
gaatccattgtggctaagttaaggatgcttaaccttaacccgcagatcattggattaagc
gcaacaataggcaacccggaggagttggctaattggcttaacgctaagctggttaaatca
gattggagaccagttagcctaagggagggggtttaccataagggtgtagtaacgtacgtt
aatgacggtgaaaagaggatcagcgggcagggtgattcactaatcaacctaacagtggac
acgttgaatgatggtgggcaggtactggtgttctcatcatcaagacaaggcgcagtgagg
attgctaggaaactggctgagtatatatgttcatccccagtcaggtacattgatcctggt
gaggcaggtaaattagctgaggaggttagggagacttcatcatcaaggatactggctgag
gaattaacaggcttaataaaatgcggcgtatccttccaccacgcgggccttgagttagag
gttaggagggttattgaggaggggtttaggaggggtgtattaagggtattagcctccaca
acgaccctagcggctggggttaatttacctgcacgtagggttattgtgaatgagtatagg
cgttatgaaccaggctacggcttcattgaaatacctgtaatggagtataagcagatggct
ggtagggcaggtagaccaggccttgacccctatggtgaagcaataataattgtttccagt
aaggatgaggtggattacgtcattgataagtacattaagtccccgccggagtacgttaag
tcaaacttcatgaaccctacatcacttaaattccacacactatcagcggtggcaagccag
tacgctgaaaccattgatgaattagttaaattcacttcaaacaccttcgctgggtttcag
ggtaaattatcagcaatgattcaagctaattcagtgaggaggatgatcagtaggatcatt
gatgaactggttgattacggcttcataataaggaatggggataaactagaggccactgag
gttggtgcagttgttaacaggatgtaccttgacccagatactgcacacgtattcataatg
ggtttgagaaacctcaacagtgacgctgacttaaacgcctactcactgatgcttgtggtt
aagtcacctaagatacctaaggttaaggtgaggaggaatgagcttgatgaattagctcaa
caagcagcctcaatgtggtcctcaataccccttaaacccagtgatgtggatgagttagtt
aattaccctgaggattacgaggacttcctatcagagtttaaaacagccatggcgctcctt
gagtggattaatgagagtaatgaggatcaaattatgaagacttacgacgtccaacctggg
gatttaagggtgctttcagaccaagccgagtggttaataggtgcacttcaggaattagcc
aggacactggggttaagtgggaatgttgtgaatgggttgagggcgcttaggtatagggtg
aagtacggtgttaatgatgaactcctggaactggtcgttaaccttgagggagtgggtagg
gttagggcaagggccctctatgccgcaggctataggtcaattgaggacttagctaaggca
aatgtaagtgacttaaccaggatacgtggaataggggataagattgctggttcaataatt
gaacaggctcatcaattagttaaggatggcagggtaattaagtttaatgaatccacggtt
aagggaaagactaggcgtggtggaggtggcttacttgaccacatgtattga
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