Caldivirga maquilingensis: Cmaq_1003
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Entry
Cmaq_1003 CDS
T00611
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cma
Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cma03016
]
Cmaq_1003
Enzymes [BR:
cma01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Cmaq_1003
Transfer RNA biogenesis [BR:
cma03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Cmaq_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
SPL
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ABW01834
UniProt:
A8MDH8
LinkDB
All DBs
Position
complement(1056091..1057359)
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AA seq
422 aa
AA seq
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MPTYYIETYGCWLNKADSALMEEDLRRMGYVKVNDPAQADLILVNTCAVREDSEIRELKA
IEKYSRLGKKLIVAGCLTKARPSEIMRLAPDALIVNPSSVENLAELLKGGVNLTERLMVR
IPKYYESSHVYVVPIQVGCLGNCSYCVIKYTRGGMGWVKSADLSVVKESIAKAVARGARE
IYLTGQEISAYGKDKGYDLVDLLEAVLRDVEGRYLIRLGMLEPLELEGMIHRLIDVIKND
WRIYRFFHIPVQSGSDKVLRLMKRKYTVDLFKREVELIRRSFRNSFIATDIIVGHPGEDD
SDFQESVRLIRELGIDKVHVARYSPRPFTEAAYMRQVPDQVKKQRSSMLSKVALEVAYSR
NLEYVGGTYEGLISSIGFKGRGLMARLMDYRPVIINEGDLGSFVKIKVTGASSINLIGKI
IE
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacgtactacattgagacttatggttgctggctgaataaggctgattcagcatta
atggaggaggatttaaggagaatgggttacgttaaggttaatgatcctgctcaagcagac
ttaatactagttaatacatgtgctgttagggaggattcagagattagggaacttaaggct
attgagaagtactctaggttaggtaagaagctaatagtggccgggtgcttaactaaggca
aggcccagtgaaataatgagactagcccctgacgcattaatagtgaatccaagttccgtt
gaaaatttggccgagttgttaaagggtggtgttaatttaactgagaggttaatggttagg
attcctaagtactatgaatcaagccacgtttacgttgtgcctattcaagttggttgcctt
ggtaactgctcatactgcgttatcaaatacactaggggtggtatgggttgggttaagagc
gctgatttaagcgtggttaaggaatccatagccaaggcagtggcaaggggtgctagggag
atttacttaactggacaggagatttcagcgtacggtaaggataagggttatgacttagtt
gacttacttgaggcagtattgagggatgttgagggaaggtacttgattaggttaggtatg
cttgagccactggagcttgaggggatgatacataggttaattgatgtaattaagaatgac
tggagaatctacaggttcttccacatacctgtgcaaagcggtagtgataaggtgcttaga
ttaatgaagcgtaagtacactgtggatttgtttaaacgggaagtggagttaattaggagg
agcttccgtaactcattcatagccacagacatcatagttggccaccctggggaggatgat
tctgatttccaggagagcgttaggttgattagggaactaggtattgataaggttcatgtc
gccagatatagcccaagaccattcactgaggctgcttacatgcgtcaagtacctgatcag
gttaagaagcagaggagcagcatgttaagtaaggtggcccttgaggtggcgtattccagg
aaccttgagtacgttggcggcacctacgaggggttaattagctcaattgggtttaagggt
aggggacttatggctaggttaatggactataggccagttatcattaatgagggtgactta
ggctcattcgtgaaaattaaggtaactggggcctcatcaataaacttaatcggcaaaata
attgaatga
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