Cucurbita maxima (winter squash): 111468609
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Entry
111468609 CDS
T05246
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111468609
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmax01007
]
111468609
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmax03016
]
111468609
Enzymes [BR:
cmax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
111468609
Amino acid related enzymes [BR:
cmax01007
]
Aminoacyl-tRNA synthetase
Class II (A)
111468609
Transfer RNA biogenesis [BR:
cmax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111468609
Prokaryotic type
Other AARSs
111468609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
CCDC47
Eapp_C
Motif
Other DBs
NCBI-GeneID:
111468609
NCBI-ProteinID:
XP_022969639
UniProt:
A0A6J1I377
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MYIHFSIPTQLSVPASSLPSSATAAVVFILFVPPRPPSNGRMAGSTEGLGSASATVDAVA
DSAPGSEETISKNARKKELKLKQKEEERRRKEELKEKAKQEASQSKKSVAVDDEEMDPTE
ASQSKKSVAVDDEEMDPTHFFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILN
NGDHLEEVSESLAGRIMSKRSSSSRLLFYDLHGSGAKIQVMADARVSELDEAEFAMFHAS
VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPGFENANLKKNDAWVP
GCTRNPETYTLKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETP
MMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKQLVVGGLDRVYEIGKQFRNEGIDL
THNPEFTTCEFYMAFADYYDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNDPIEIDFTP
PFRRIDMIEELEKMANLNIPKNLASDEANKYLREACLKFEIKCPPPETTARLLDKLVGHF
LEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQR
FVEQLKDRQSGDDEAMALDETFCTSLDYGLPPTGGWGMGIDRLAMLITDSQNIKEVLLFP
AMKPQDESSAPKGGKWMVC
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtatatacatttttcgatcccaacccagctgagtgtacccgcctcatctctcccgtcc
agcgctaccgccgccgtcgtatttattctgttcgtgccgccgcggcctccgtccaacggt
cgaatggcgggttcaactgaagggttgggttctgcttctgcaactgtggatgcagtagcc
gattctgccccaggttctgaagaaactattagcaagaatgcacgcaagaaggaattaaag
ctgaagcagaaggaagaggaaaggaggcgtaaggaggaactcaaggagaaagcaaaacag
gaagcatcccagagtaagaaatctgtagcagttgatgatgaagaaatggatcccacggaa
gcatcccagagtaagaaatctgtagcagttgatgatgaagaaatggatcccacgcatttt
tttgaaaataggctgaaatatcttgcatctcagaaggcagatggtaaaaatccatatcct
cacaagtttcaggtttcgatgtctctcctcgagtatattgagaaatatggaattttaaac
aatggtgatcaccttgaggaagtctcggaatctcttgctgggaggataatgagcaaacga
tcctcctcctcgaggttgttattttatgatcttcatggttctggagctaaaatccaagtt
atggctgatgcacgtgtctcagagctcgatgaagctgaatttgcgatgtttcatgccagt
gtgaagcgtggggatattgttggtgtcactgggtttccaggaaaaacaaaaaggggagaa
ctcagtatttttccaaaatcattcattgtcctatctcactgtctgcatatgatgccaagg
cagaaggcgggtcctggttttgaaaatgcaaatttgaagaaaaatgacgcatgggtccca
ggttgtaccaggaatcctgaaacctatactttaaaggatcaggaaactcgttatcgtcaa
cgatatctggatttgatgttaaatttggaagtgaggcaaatattcaaaaccagagctaaa
gtaatccaatatgttaggaagtttcttgacgatcttgacttcttggaggttgagacacca
atgatgaacatgattgctggaggagcagctgcccgtccatttgtgaccttccacaatgat
ctcaacatgaaattgtttatgcgcattgcacctgaactttatcttaagcagttagttgtt
ggtggattggaccgtgtatatgagatagggaaacaatttagaaacgagggtatcgatttg
actcataatcccgagttcaccacctgcgagttctacatggcgtttgcagactactatgat
ttgatggaactcaccgagaaaatgctaagtggaatggtgaaggaacttacagggggctat
aaagtaaaataccattcaaatgggcttgacaatgacccgattgagattgacttcactccc
ccttttaggaggattgacatgatagaggaattggaaaaaatggcaaatcttaatataccc
aagaacttggccagtgatgaagctaataaatatcttagagaggcgtgcctgaagtttgaa
atcaaatgtcctccacctgaaacaactgctcgcttgctggataaacttgtgggacatttc
ctagaagaaacgtgcgtgaatcctgctttcatcatcaatcatcccgagattatgagtcct
ttggcaaagtggcatagagcaagacctagtctaactgaacgctttgaattgttcatcaac
aaacatgaagtatgtaatgcgtacactgaattgaatgatcctgttgtacaacgccagcgg
tttgttgaacaactcaaggatcgacagtcgggtgatgatgaagcaatggctttggatgaa
acattttgtacgtctcttgattatggattgcctcctactggtggctggggaatgggcatt
gaccggctagctatgttgataacggattcgcagaacatcaaggaagttcttctcttccca
gccatgaagcctcaagatgaatcatcagctcccaaagggggaaaatggatggtttgctaa
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