Clavibacter nebraskensis: CMN_02934
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Entry
CMN_02934 CDS
T02530
Symbol
ssb
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc03030
DNA replication
cmc03430
Mismatch repair
cmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMN_02934 (ssb)
03430 Mismatch repair
CMN_02934 (ssb)
03440 Homologous recombination
CMN_02934 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmc03032
]
CMN_02934 (ssb)
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_02934 (ssb)
03029 Mitochondrial biogenesis [BR:
cmc03029
]
CMN_02934 (ssb)
DNA replication proteins [BR:
cmc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CMN_02934 (ssb)
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CMN_02934 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
CMN_02934 (ssb)
Mitochondrial biogenesis [BR:
cmc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CMN_02934 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CCE76858
UniProt:
M5BBZ6
LinkDB
All DBs
Position
complement(3046801..3047352)
Genome browser
AA seq
183 aa
AA seq
DB search
MAGETIITVVGNLTSDPELRYTQNGLAVANFTIASTPRSFDRASNDWKDGDALFLRASVW
REFAEHVASSLTKGSRVVATGRLKQRSYETKEGEKRTSIELEVDEIGPSLRYATAQVTRA
AGGGGNGGGGNSGGGGRGQFGGGQPQQQVAEEPWGTPASSGGNSGGGDGGWSNPGNFNDE
TPF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaaaccatcatcacggtcgtgggcaacctcaccagtgatccggagctgcga
tacacgcagaacgggctggcggtagccaacttcaccatcgcctccacgccgaggtccttc
gaccgcgcgagcaacgactggaaggacggcgacgccctcttcctccgtgcgagcgtgtgg
cgcgagttcgccgagcacgtggcgtcctcgctcaccaagggctcgcgtgtcgtcgcgacc
ggccgcctcaagcagcggtcctatgagacgaaggagggcgagaagcgcacctccatcgag
ctcgaggtcgacgagatcggcccctcgctccgctacgcgaccgctcaggtcacgcgcgcg
gccggcggcggcggcaacggcggcggaggcaactccggcggcggtggccgtggccagttc
ggtggcggacagccccagcagcaggtggccgaggagccgtggggcacccccgcgagctcc
ggcggcaactccggcggcggcgacggcggctggtccaaccccggcaacttcaacgacgag
acgcccttctag
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