Clavibacter michiganensis subsp. insidiosus: VO01_11245
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Entry
VO01_11245 CDS
T03862
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00061
Fatty acid biosynthesis
cmh00071
Fatty acid degradation
cmh01100
Metabolic pathways
cmh01212
Fatty acid metabolism
cmh02024
Quorum sensing
Module
cmh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VO01_11245
00071 Fatty acid degradation
VO01_11245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO01_11245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cmh01004
]
VO01_11245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmh04147
]
VO01_11245
Enzymes [BR:
cmh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VO01_11245
Lipid biosynthesis proteins [BR:
cmh01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
VO01_11245
Exosome [BR:
cmh04147
]
Exosomal proteins
Exosomal proteins of breast milk
VO01_11245
Exosomal proteins of breast cancer cells
VO01_11245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJW79630
UniProt:
A0A0D5CK27
LinkDB
All DBs
Position
complement(2375543..2377129)
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AA seq
528 aa
AA seq
DB search
MSSDTPLQPAHEQPPGGFASVSVAAILAESADRHADRVAVVVGDVSTTYRELWDETRAYA
GALRDRGVGEGTRVAMLIPNVADFPRVYYAVLALGGVVVPVHALLKAEEIAYVLRDSGSA
LLVCAGPLLEQGGKGAVLADVPVISVLVPASSEGGPERLEELARAATPIRTYVPRRPSDT
ATILYTSGTTGQPKGAEGCHLALVMQVDVLLLDTFDLRAGDRILGCLPLFHTFGQTCTMN
ASFRAGATIVMVPRFDGDAALALMVEHDTQVFMGVPTMYFALLAAAARNPARPALRYAIS
GGAALPVAAIDAFREAFSAEIHEGYGLTETSPVASFNHVGLPARPGTVGKPIWGVQIEIA
DPEREDRVELLERGVLGEIVIRGHNLMNGYLHRPEDTARAIVDGWFRTGDLGTIDDEGYI
RVVDRTKDMILRNGYNVYPREVEEVLARHPDVAQCAVFGVAHELHGQEVAAAIVVRADAE
VDPAEVIAFLRERIASYKYPRRVEIVDALPLGPSGKVLKRELVDRFGA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacacgcccctccagcccgcgcacgagcagccccccggcgggttcgcctcc
gtctcggtcgccgcgatcctcgccgagtccgctgaccggcacgccgaccgcgtcgccgtg
gtcgtcggcgacgtctccaccacctaccgcgagctctgggacgagacgcgggcctacgcg
ggcgccctccgcgaccgcggggtgggcgagggcacgcgcgtcgcgatgctcatcccgaac
gtcgccgacttcccccgcgtgtactacgcggtgctcgcgctcggcggcgtggtcgtgccc
gtgcacgcgctgctgaaggccgaggagatcgcgtacgtgctgcgcgactcgggatccgcg
ctcctggtgtgcgccggaccgctgctcgagcagggcgggaagggcgcggtgctcgcggac
gtgcccgtcatcagcgtgctcgtgccggcctcctccgagggcggacccgagcgcctggag
gagctcgcgcgggccgcgacgccgatccgcacctacgtgccgcgccggccgtccgacacc
gcgacgatcctctacacctcgggcaccacggggcagccgaagggcgcggagggctgccac
ctcgcgctcgtgatgcaggtcgacgtgctgctgctcgacaccttcgacctgcgcgcgggc
gaccggatcctgggctgcctgcccctgttccacaccttcgggcagacctgcaccatgaac
gcgtcgttccgcgcgggcgcgaccatcgtgatggtgccgcgcttcgacggcgacgcggcc
ctcgcgctcatggtcgagcacgacacgcaggtcttcatgggcgtgccgaccatgtacttc
gcgctgctggccgccgccgcccggaaccccgcgcggccggccctgcgctacgccatctcg
ggcggcgccgcgctcccggtggccgcgatcgacgcgttccgggaggcgttctccgccgag
atccacgagggatacgggctcacggagacctcgcccgtcgcgtcgttcaaccacgtgggg
ctgccggcccggccgggcaccgtcgggaagccgatctggggcgtgcagatcgagatcgcc
gatcccgagcgcgaggaccgcgtcgagctcctcgagcgcggcgtgctcggcgagatcgtg
atccgcggccacaacctcatgaacggctacctgcaccggccggaggacacggcccgcgcg
atcgtcgacggctggttccgcacgggcgacctcggcaccatcgacgacgagggctacatc
cgcgtggtcgaccggacgaaggacatgatcctgcgcaacggctacaacgtgtacccgcgc
gaggtcgaggaggtgctcgcccggcaccccgacgtggcgcagtgcgccgtgttcggcgtc
gcgcacgagctgcacggccaggaggtggcggcggcgatcgtggtgcgcgccgacgccgag
gtggatccggccgaggtgatcgcgttcctccgcgagcgcatcgcctcgtacaagtaccct
cgacgcgtggagatcgtggatgcgctgcccctcgggcccagcgggaaggtgctgaagcgc
gagctcgtcgaccggttcggggcgtga
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