Clavibacter michiganensis subsp. michiganensis: CMM_0006
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Entry
CMM_0006 CDS
T00529
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmi03032
]
CMM_0006 (gyrB)
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_0006 (gyrB)
Enzymes [BR:
cmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CMM_0006 (gyrB)
DNA replication proteins [BR:
cmi03032
]
Prokaryotic type
DNA Topoisomerases
CMM_0006 (gyrB)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMM_0006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CAN00011
UniProt:
A5CLT8
LinkDB
All DBs
Position
5958..8003
Genome browser
AA seq
681 aa
AA seq
DB search
MTSDATQDLPDDSTPDEVEVEETHNDSDHITRQQVSNDYGANEIQVLEGLEAVRKRPGMY
IGSTGPRGLHHLVSEIVDNSVDEALAGFASDIQITMRKDGGIRVVDDGRGIPVDIHPVEG
ISTVELVLTKLHAGGKFGGGGYAVSGGLHGVGSSVVNALSERLDVEVRRQGAVWRQSFTI
GVPDEPLQKGEGSTETGTTITFWPSREIFETVEFDYDTLRARFQQMAFLNKGLALTLHDE
REVDGAEHRTEKFLYERGLVDYVEHLVKAKKTEVVNADVIAFESEDTVKKISLEVAMQWT
TSYTESVHTYANTINTHEGGTHEEGFRAALTTLVNRYARENKLLREKDENLTGDDVREGL
TAVISVKLGEPQFEGQTKTKLGNTEAKAYVQRIVGQQLGDWLEKNPSQAKDIIRKGMQAS
QARLAARKAREQTRRKGLLESGGMPGKLKDCQSKDPALSEVFLVEGDSAGGSAVQGRNPT
TQAILPLRGKILNVEKARLDRALQNNEVQSMITAFGAGIGEDFNAEKVRYHKIVLMADAD
VDGQHITTLLLTLLFRYMRPLIELGYVYLAQPPLYRLKWSNAEHQYVYTDAERDALLVHG
QAKGKKMPKDNGIQRYKGLGEMDYKELWETTMDPATRTLMQVTLDDAAGADEVFSTLMGE
DVESRRSFIQRNAKDVRFLDI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggatgccacacaggacctccccgacgactccacccccgacgaggtggaggtc
gaggagacgcacaacgactccgaccacatcacccgccagcaggtgagcaacgactacggc
gccaacgagatccaggtgctcgagggcctcgaggcagtgcgcaagcgccccggcatgtac
atcgggtccacgggaccgcgcggtctgcaccacctggtgagcgagatcgtcgacaactcc
gtcgacgaggccctcgccgggttcgccagcgacatccagatcaccatgcgcaaggacggc
gggatccgcgtcgtcgacgacggccgcggcatcccggtcgacatccaccccgtcgagggg
atctccacggtcgagctcgtcctcaccaagctgcacgccggcggcaagttcggcggcggc
ggatacgcggtgtccggcggcctgcacggcgtcggcagctccgtcgtgaacgcgctgtcc
gagcgcctcgacgtcgaggtccgccgccagggcgccgtgtggcgccagagcttcaccatc
ggcgtgccggacgaacctctccagaagggcgagggatccaccgagaccggcacgaccatc
accttctggccgagccgcgagatcttcgagaccgtcgagttcgactacgacaccctccgc
gcgcgcttccagcagatggcgttcctcaacaagggcctggcgctcacgctgcacgacgag
cgcgaggtggacggcgccgagcaccgcaccgagaagttcctctacgagcggggcctcgtc
gactacgtggagcacctcgtgaaggcgaagaagaccgaggtcgtcaacgccgacgtcatc
gccttcgagtccgaggacacggtcaagaagatcagcctcgaggtcgcgatgcagtggacc
acctcctacacggagagcgtccacacctacgcgaacaccatcaacacgcacgagggcggc
acgcacgaggaggggttccgcgcggcgctcaccacgctcgtcaaccgctacgcgcgcgag
aacaagctgctccgcgagaaggacgagaacctcacgggcgacgacgtccgcgagggcctc
acggccgtcatctcggtgaagctcggcgagccgcagttcgagggccagaccaagaccaag
ctgggcaacaccgaggcgaaggcctacgtccagcgcatcgtcggacagcagctgggggac
tggctcgagaagaacccctcacaggcgaaggacatcatccgcaaggggatgcaggcctcg
caggcgcgtctcgccgcccgcaaggcgcgcgagcagacccggcgcaagggcctgctcgag
tcgggcggcatgcctggcaagctcaaggactgccagagcaaggacccggcgctcagcgag
gtgttcctcgtcgagggcgactcggccggcggatccgcggtgcaggggcgcaaccccacg
acgcaggcgatcctcccgctgcgcggcaagatcctcaacgtcgagaaggcccggctcgac
cgcgcgctgcagaacaacgaggtgcagtcgatgatcaccgcgttcggcgcgggcatcggc
gaggacttcaacgccgagaaggtcaggtaccacaagatcgtgctcatggccgacgcggat
gtcgacggacagcacatcacgaccctgctgctcaccctgctgttccgctacatgcggccg
ctcatcgagctgggctacgtctacctggcgcagccgccgctctaccggctcaagtggtcg
aacgccgagcaccagtacgtctacaccgatgccgagcgcgatgccctgctggtgcacggg
caggccaaggggaagaagatgccgaaggacaacggcatccagcgctacaagggcctcggc
gagatggactacaaggagctgtgggagaccaccatggatccggccacccgcacgctcatg
caggtcacgctcgacgacgccgcgggcgccgacgaggtgttctcgacgctgatgggcgag
gacgtcgagtcccgccggagcttcatccagcgcaacgccaaggacgtcaggttcctcgac
atctga
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