Clavibacter michiganensis subsp. michiganensis: CMM_0233
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Entry
CMM_0233 CDS
T00529
Name
(GenBank) putative peptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMM_0233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmi02000
]
CMM_0233
Transporters [BR:
cmi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CMM_0233
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CAN00255
UniProt:
A5CMG9
LinkDB
All DBs
Position
complement(293131..294786)
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AA seq
551 aa
AA seq
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MPSIVTTRTAFADASSRTIRIADRAARPDRPNTPSRRAILAGTAGIAGLGLLALTGCATG
ASSTTIPEAAATGTPVQGGRLRVARPAASAAETLDSASSLSAYEYLGALYNRLVKLDEKG
ETIPDLAEEWSASADGVTWTFRLRRDVRFHDGTRFTAADAIASIQHVIDPATASPQGGVL
GDMLDPGSMSAPDAHTLVFQLKTPNAEFPSLLTAYQCYIVPADAIATIGSTGIGTGPFRL
SSFHPAGSGSVEAFDDHFAGRPVLDGIDFSSIQDTTARVNALLAGQIDLISQTNLDFATA
RVVSASSRATVARVENAQWYTIPMLATSAEFQDPLVRQAMKLAYDPEQILATALQGTGTA
GWDNPVPPSLAAFVDVDRAYDPDQAKALLAKAGVSGLRTTIHTSSYESVFTPMAVAYRDQ
VKAAGIDLTVTNASSDSYYTEIWMQKPLMVSYWFTGRPIDQLLNQIFRTGSSYNESAWSN
PTFDALLDDARATMDDAKRLTLYQDAQRIVVEDSADMTPMFGDRLVGISRDVVNYREFGF
EFDHLTIGFRR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgatcgtcaccacccgcaccgcattcgcggacgcgagctcgcgcaccatccgc
atcgccgaccgtgcagcgcgacccgaccgcccgaacacccccagccgtcgcgccatcctc
gcgggcaccgccgggatcgccggcctcggcctgctcgccctcaccgggtgcgccaccggc
gcgagcagcacgaccatccccgaggccgccgcgaccggcacgcccgtgcagggcggccgc
ctccgcgtcgcgcgcccggccgcatccgccgccgagaccctcgactccgcgagctcgctc
tccgcgtacgagtacctcggtgccctctacaaccggctcgtgaagctggacgagaagggc
gagacgatcccggacctcgccgaggagtggtccgcatccgctgacggcgtcacgtggacc
ttccgcctccgccgcgacgtgcgcttccacgacggcacccgcttcacggcggcggacgcg
atcgcctccatccagcacgtcatcgatcccgcgacggcctccccgcagggcggcgtgctc
ggcgacatgctcgatccgggcagcatgtcggcgccggatgcgcacaccctcgtcttccag
ctgaagacccccaacgcggagttcccgtcgctgctcacggcctaccagtgctacatcgtg
ccggccgacgcgatcgcgaccatcggcagcaccggcatcgggacggggccgttccgcctc
tcgtccttccacccggcgggatccggcagcgtcgaggccttcgacgaccacttcgccggc
cggccggtgctcgacggcatcgacttctcctccatccaggacactacggcccgcgtgaac
gcgctgctcgccgggcagatcgacctcatctcgcagaccaacctcgacttcgcgaccgcg
cgcgtcgtctccgcgtcgagccgcgccacggtcgcgcgcgtcgagaacgcgcagtggtac
acgatcccgatgctcgccacgagcgccgagttccaggatccgctcgtgcgccaggccatg
aagctcgcctacgaccccgagcagatcctcgcgaccgcgctgcagggcacgggcacggcc
ggctgggacaacccggtgccgccgtcgctcgccgcgttcgtcgacgtcgaccgcgcctac
gaccccgaccaggcgaaggcgctgctcgcgaaggcgggcgtgtccgggctgcgcacgacg
atccacacctcctcctacgagtcggtgttcacgcccatggcggtcgcctaccgcgaccag
gtgaaggccgcgggcatcgacctcacggtcacgaacgcgtcctccgactcctattacacg
gagatctggatgcagaagccgctgatggtgagctactggttcaccggccggcccatcgac
cagctgctcaaccagatcttccgcaccggctcgtcctacaacgagagcgcgtggtcgaac
ccgaccttcgacgcgctcctcgacgacgcccgcgccacgatggacgacgcgaagcggctg
acgctctaccaggacgcccagcggatcgtcgtggaggacagcgcggacatgacgcccatg
ttcggcgaccggctcgtgggcatctcccgcgacgtcgtgaactaccgcgagttcggcttc
gagttcgaccacctcacgatcggattccgccgatga
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