Clavibacter michiganensis subsp. michiganensis: CMM_0630
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Entry
CMM_0630 CDS
T00529
Symbol
rocD
Name
(GenBank) putative ornithine aminotransferase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00330
Arginine and proline metabolism
cmi01100
Metabolic pathways
cmi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CMM_0630 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmi01007
]
CMM_0630 (rocD)
Enzymes [BR:
cmi01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
CMM_0630 (rocD)
Amino acid related enzymes [BR:
cmi01007
]
Aminotransferase (transaminase)
Class III
CMM_0630 (rocD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Big_2
Motif
Other DBs
NCBI-ProteinID:
CAN00657
UniProt:
A5CNL9
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All DBs
Position
718242..719486
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AA seq
414 aa
AA seq
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MTDTIDRPAASDAGALAIHAEEAHAAHNYHPLPVVVASGEGAWVTDLDGRRLLDCLAAYS
AVNFGHSHPDLVRAATEQLGRITLTSRAFHNDKLGPFVTALAELAGKDMVLPMNTGAEAV
ESGIKVARAWGYRVKGVAAGRAKIIVMAGNFHGRTTTIVSFSDDEEARADFGPFTPGFVT
VPYGDAAALEAAIDADTVAVLVEPIQGEAGIVVPPEGYLADVRRICSRERVLMIADEIQS
GLGRTGATFECDNAGVVPDLYLLGKALGGGIVPVSAVVGDADVLGVIQPGQHGSTFGGNP
LAAAVGHAVVEMLASGEPQERARRLGAVLHARLADLVGHGVLAVRGRGLWAGIDIDPALA
TGRAVCERLAERGVLAKDTHGSTIRLAPPIVVEEEDLVWAVGQLAEVLAELAGR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccatcgaccgccccgccgcatccgacgccggcgccctcgcgatccacgcc
gaggaggcgcacgccgcgcacaactaccacccgctccccgtcgtggtcgcgtccggcgag
ggcgcgtgggtcaccgacctcgacggccgccgcctgctcgactgcctcgccgcgtactcg
gccgtgaacttcgggcactcgcacccggacctcgtgcgcgccgcgaccgagcagctcggc
cggatcacgctcaccagccgcgcgttccacaacgacaagctgggcccgttcgtcacggcg
ctcgccgagctcgcgggcaaggacatggtcctgccgatgaacacgggcgcggaggccgtg
gagtccgggatcaaggtcgcgcgcgcctgggggtaccgcgtgaagggcgtggccgcgggc
cgggcgaagatcatcgtcatggccggcaacttccacggccgcaccaccaccatcgtgagc
ttcagcgacgacgaggaggcgcgcgccgacttcggcccgttcacgcccggcttcgtgacc
gtgccgtacggcgacgccgcggcgctcgaggccgcgatcgacgcggacacggtcgcggtg
ctcgtcgagccgatccagggcgaggccggcatcgtcgtgccgcccgaggggtacctcgcc
gacgtgcggcggatctgctcgcgcgagcgtgttctgatgatcgccgacgagatccagtcc
ggcctcggccgcacgggcgcgaccttcgagtgcgacaacgcgggcgtcgtgccggacctg
tacctcctcggcaaggcgctcggcggcggcatcgtgcccgtctccgcggtggtcggggac
gcggacgtgctcggcgtcatccagccggggcagcacggatccacgttcggcggcaacccg
ctcgccgcggccgtgggccacgcggtggtcgagatgctcgcgtcgggcgagccgcaggag
cgcgcgcgtcgcctcggcgcggtgctgcacgcgcggctggcggacctggtcggccacggc
gtgctcgcggtgcgcggacgaggcctctgggcgggcatcgacatcgacccggcgctcgcg
accggccgcgcggtgtgcgagcggctcgccgagcgcggcgtgctcgccaaggacacgcac
ggctccacgatccgcctcgcgccgcccatcgtggtggaggaggaggacctcgtctgggcc
gtcggccagctcgccgaggtgctcgcggagctcgccggccgctga
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