KEGG   Cronobacter malonaticus LMG 23826: AFK66_014880
Entry
AFK66_014880      CDS       T04062                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
cmj  Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:cmj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmj03400]
    AFK66_014880
DNA repair and recombination proteins [BR:cmj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AFK66_014880
    Archaeal homologous recombinant proteins
     AFK66_014880
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 nSTAND3 cobW T2SSE AAA_15 ABC_ATPase AAA_22 NTPase_1
Other DBs
NCBI-ProteinID: ALX79597
LinkDB
Position
3083352..3086501
AA seq 1049 aa
MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR
LNALSQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQSRARGQPDGNLQAPRVELARCE
DGKIVADKIKDKLDRIAALTGLDYDRFTRSMMLSQGQFAAFLNAEAKARAELLEELTGTE
IYGQVSARIFEQHKEARSQLEKLESQAQGVRLLDEAQRESLTTGLQALTDEEKTLLARQR
QLQQEHLWLTQRTALARALDAARQAAAAADAALQAAAPDLARLEAALPAEKLRPAWLRCQ
ELETTLAATGRQHEEVSVRLQESQQRRREIRQAAAQQAQVQTAELTQLGQWLTEHDRFRL
WSSELAGWRAVLAHQKRDRDQLRALNETLDATRRKRDALPDAGLALSPEDAAQALAQLNE
QRPLRQKLSTLQSSFAPLTRRKARLQETNSVLQTQIQQLEQQLAQKRQDYKTKQQDVERA
KAVCDLEQRIASLVEERARLQPGSPCPLCGATEHPAVEAYQALKPDASRLRLAQLEQEKE
QLGTEGAALRGQLDALMKQRQQQESEAASLLEEEQALTSQWQTLCAAAGLTQAPGDDLTP
WLDEQTRREQQLHLLRERQMLEATLEGTQRQVTSLEAAWQTQQAALRDQLDAFALPAPDA
DNPAPWFAEREEETRRWQQYHERQQRLREQLSACEALLSLLPQEGDAQAASLAADELPRA
GQEIHTRCLSLEAQWQTLGAQLLQERARYQNAVQAFDAALAVSPFADKAAFLAALLDDAT
RSHLEAQKQRLERERETQHTLLAQAQQALERHLSARPEAMDDTADAQQSEAALTAVTEQL
RDNTTRQGELRQQLRQDEESRTQLAALLGQIDEARREADEWGQLNHLVGSQKGDKFRKFA
QGLTLDNLVWLANNQLARLHGRYLLKRKLSEDLELEVVDTWQADAVRDTRTLSGGESFLV
SLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEA
MKERIPVQIKVRKINGLGVSRLAREYQVD
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgaaaatcttaactctacggctaaaaaacctgaactcgctgaaaggcgaatggaaaatc
gactttaccgccgaaccgttcgcgagcaacgggctgttcgcgatcaccggcccgaccggc
gcgggcaaaaccacgctgctggatgccatctgccttgcgctctaccaccgcacgccgcgc
ctgaacgcgctgtcgcaaagccagaatgacctgatgacgcgcgacaccgccgagtgtctg
gcggaagtggagtttgaagtcaaaggcgtcgcctggcgcgccttctggagccagagccgc
gcgcgcggccagccggatggcaatttacaggccccgcgtgtggagctggcgcgctgcgaa
gacggcaaaatcgtcgccgataaaatcaaagacaaactcgacagaattgccgcgctgacg
ggcctcgattacgaccgtttcacccgttcgatgatgctctcgcagggccagttcgccgcg
tttctcaatgccgaagccaaagcgcgtgccgaactgctggaagaactgaccggtaccgaa
atctacggccaggtctcggcacgtattttcgaacagcataaagaggcccgcagccagctt
gagaagctcgaatcgcaggcgcagggcgtgcggctgctggacgaagcgcagcgggaaagc
ttaaccacaggtttgcaggcgcttactgacgaggaaaaaacgctgcttgcccgccagcgc
cagttacagcaagagcacctgtggctgacgcagcgcaccgcgcttgcccgcgcgctcgac
gcggcacgccaggccgcggctgcggcggatgcggcgttacaggccgccgccccggatctc
gcgcggcttgaagcggcgctaccggcggaaaaactgcgtccggcgtggctgcgctgtcag
gagctggaaaccacccttgccgccaccggtcgccagcatgaagaagtaagcgttcgctta
caggaaagccagcagcgccgccgggagatccgccaggccgccgcgcaacaggcgcaggtg
cagacggcggaactcacgcaactcggccagtggctgacggagcatgaccgctttcgcctc
tggagcagcgagctcgcaggctggcgcgcggtgctggcgcatcaaaaacgcgaccgcgac
cagctccgcgcgctgaacgagacgctcgacgccacccgccgcaagcgagacgcgctgccg
gacgccgggcttgcgctctcgccggaggacgccgcgcaggcgctggcgcagcttaacgag
cagcgcccgctgcgccagaagctttcaacgctccagtcatcctttgcgcccctgacgcgc
cgtaaagcgcgcctgcaggagacgaacagcgtcctgcaaacgcagatccagcagcttgag
cagcagctggcgcaaaagcgtcaggattacaaaactaaacaacaggatgtggagcgcgcg
aaagcggtctgcgatctggagcagcgtatcgcgagcctcgttgaagagcgcgcgcgcctg
caacccggcagcccctgcccgctgtgcggcgcgaccgaacacccggccgtggaggcgtat
caggcgctgaagcctgacgcgagccgcctgcgtcttgcgcaactggagcaggagaaagag
cagctcggcaccgagggcgcagcgctgcgcggccagctcgacgcgctgatgaaacagcgc
cagcagcaggaaagcgaagcggcaagcctgctggaagaagagcaagcactcacctcacaa
tggcagacgctctgtgcggcggccggtctcacccaggcaccaggcgacgatctcaccccg
tggcttgacgaacagacccgccgcgaacagcagttgcacctgctgcgcgagcgtcagatg
ctggaggccacgcttgaaggcacgcagcgtcaggtcacgtcgctggaagcggcctggcag
acgcagcaggcggcgctgcgcgaccagcttgacgccttcgccctgcccgcgccggatgcc
gacaaccctgcgccgtggttcgccgaacgtgaagaagagacgcgccgctggcagcagtat
cacgaacgccagcaacgcctgcgtgaacagctttccgcctgtgaagcgctgctgagcctg
ttgccacaggagggcgacgcgcaggcggcgtcactcgcagcagacgaactaccgcgcgcg
ggccaggagatccatacgcgctgtttatcgctggaagcgcagtggcagacactcggcgcg
cagcttctgcaggagcgcgcgcgctaccagaatgcggtgcaggcatttgacgcagcgctc
gccgtaagcccgtttgcggataaagcagcgtttctcgccgccctgctggatgacgccacc
cgaagccaccttgaagcccaaaaacagcggctggagcgcgagcgtgaaacgcagcacacg
ctgctcgcacaggcgcagcaggcgctggagcgccacctgagcgcgcgcccggaagccatg
gacgacacggctgacgcacagcagagcgaagctgcgctcacggcagtgacagagcaactg
cgtgataacaccacgcgccagggcgagctgcgccagcagttgcgccaggacgaagagagc
cgcactcagctcgccgcacttcttggccagattgacgaagccaggcgcgaggccgacgaa
tggggccagctcaaccatctggtcggctcgcagaaaggcgataaattccgtaagttcgca
caggggctgacgctggataatctggtatggctggccaataaccagttagcgcgcctgcat
ggccgctacctgcttaaacgcaagctgagcgaagatctggagctggaagtggtggacacc
tggcaggcggacgcggtgcgcgacacccgcacgctctccggcggcgaaagcttcctggtg
agtctcgcgctggcgctggcgctctcagatctggtgagccataaaacccgcatcgattcg
ctgtttctggatgagggtttcggcacgctggacgcccagacgctcgatacggcgctggat
gccctcgacgcgctgaacgccagcggcaaaaccatcggcgttatcagccacgtggaggcg
atgaaagagcgtatcccggtgcagatcaaagtaagaaagattaacggccttggcgtgagc
cgcctggcgcgcgagtatcaggtcgattaa

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