Cronobacter malonaticus LMG 23826: AFK66_014880
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Entry
AFK66_014880 CDS
T04062
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_014880
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK66_014880
Archaeal homologous recombinant proteins
AFK66_014880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
nSTAND3
cobW
T2SSE
AAA_15
ABC_ATPase
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ALX79597
LinkDB
All DBs
Position
3083352..3086501
Genome browser
AA seq
1049 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR
LNALSQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQSRARGQPDGNLQAPRVELARCE
DGKIVADKIKDKLDRIAALTGLDYDRFTRSMMLSQGQFAAFLNAEAKARAELLEELTGTE
IYGQVSARIFEQHKEARSQLEKLESQAQGVRLLDEAQRESLTTGLQALTDEEKTLLARQR
QLQQEHLWLTQRTALARALDAARQAAAAADAALQAAAPDLARLEAALPAEKLRPAWLRCQ
ELETTLAATGRQHEEVSVRLQESQQRRREIRQAAAQQAQVQTAELTQLGQWLTEHDRFRL
WSSELAGWRAVLAHQKRDRDQLRALNETLDATRRKRDALPDAGLALSPEDAAQALAQLNE
QRPLRQKLSTLQSSFAPLTRRKARLQETNSVLQTQIQQLEQQLAQKRQDYKTKQQDVERA
KAVCDLEQRIASLVEERARLQPGSPCPLCGATEHPAVEAYQALKPDASRLRLAQLEQEKE
QLGTEGAALRGQLDALMKQRQQQESEAASLLEEEQALTSQWQTLCAAAGLTQAPGDDLTP
WLDEQTRREQQLHLLRERQMLEATLEGTQRQVTSLEAAWQTQQAALRDQLDAFALPAPDA
DNPAPWFAEREEETRRWQQYHERQQRLREQLSACEALLSLLPQEGDAQAASLAADELPRA
GQEIHTRCLSLEAQWQTLGAQLLQERARYQNAVQAFDAALAVSPFADKAAFLAALLDDAT
RSHLEAQKQRLERERETQHTLLAQAQQALERHLSARPEAMDDTADAQQSEAALTAVTEQL
RDNTTRQGELRQQLRQDEESRTQLAALLGQIDEARREADEWGQLNHLVGSQKGDKFRKFA
QGLTLDNLVWLANNQLARLHGRYLLKRKLSEDLELEVVDTWQADAVRDTRTLSGGESFLV
SLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEA
MKERIPVQIKVRKINGLGVSRLAREYQVD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaactctacggctaaaaaacctgaactcgctgaaaggcgaatggaaaatc
gactttaccgccgaaccgttcgcgagcaacgggctgttcgcgatcaccggcccgaccggc
gcgggcaaaaccacgctgctggatgccatctgccttgcgctctaccaccgcacgccgcgc
ctgaacgcgctgtcgcaaagccagaatgacctgatgacgcgcgacaccgccgagtgtctg
gcggaagtggagtttgaagtcaaaggcgtcgcctggcgcgccttctggagccagagccgc
gcgcgcggccagccggatggcaatttacaggccccgcgtgtggagctggcgcgctgcgaa
gacggcaaaatcgtcgccgataaaatcaaagacaaactcgacagaattgccgcgctgacg
ggcctcgattacgaccgtttcacccgttcgatgatgctctcgcagggccagttcgccgcg
tttctcaatgccgaagccaaagcgcgtgccgaactgctggaagaactgaccggtaccgaa
atctacggccaggtctcggcacgtattttcgaacagcataaagaggcccgcagccagctt
gagaagctcgaatcgcaggcgcagggcgtgcggctgctggacgaagcgcagcgggaaagc
ttaaccacaggtttgcaggcgcttactgacgaggaaaaaacgctgcttgcccgccagcgc
cagttacagcaagagcacctgtggctgacgcagcgcaccgcgcttgcccgcgcgctcgac
gcggcacgccaggccgcggctgcggcggatgcggcgttacaggccgccgccccggatctc
gcgcggcttgaagcggcgctaccggcggaaaaactgcgtccggcgtggctgcgctgtcag
gagctggaaaccacccttgccgccaccggtcgccagcatgaagaagtaagcgttcgctta
caggaaagccagcagcgccgccgggagatccgccaggccgccgcgcaacaggcgcaggtg
cagacggcggaactcacgcaactcggccagtggctgacggagcatgaccgctttcgcctc
tggagcagcgagctcgcaggctggcgcgcggtgctggcgcatcaaaaacgcgaccgcgac
cagctccgcgcgctgaacgagacgctcgacgccacccgccgcaagcgagacgcgctgccg
gacgccgggcttgcgctctcgccggaggacgccgcgcaggcgctggcgcagcttaacgag
cagcgcccgctgcgccagaagctttcaacgctccagtcatcctttgcgcccctgacgcgc
cgtaaagcgcgcctgcaggagacgaacagcgtcctgcaaacgcagatccagcagcttgag
cagcagctggcgcaaaagcgtcaggattacaaaactaaacaacaggatgtggagcgcgcg
aaagcggtctgcgatctggagcagcgtatcgcgagcctcgttgaagagcgcgcgcgcctg
caacccggcagcccctgcccgctgtgcggcgcgaccgaacacccggccgtggaggcgtat
caggcgctgaagcctgacgcgagccgcctgcgtcttgcgcaactggagcaggagaaagag
cagctcggcaccgagggcgcagcgctgcgcggccagctcgacgcgctgatgaaacagcgc
cagcagcaggaaagcgaagcggcaagcctgctggaagaagagcaagcactcacctcacaa
tggcagacgctctgtgcggcggccggtctcacccaggcaccaggcgacgatctcaccccg
tggcttgacgaacagacccgccgcgaacagcagttgcacctgctgcgcgagcgtcagatg
ctggaggccacgcttgaaggcacgcagcgtcaggtcacgtcgctggaagcggcctggcag
acgcagcaggcggcgctgcgcgaccagcttgacgccttcgccctgcccgcgccggatgcc
gacaaccctgcgccgtggttcgccgaacgtgaagaagagacgcgccgctggcagcagtat
cacgaacgccagcaacgcctgcgtgaacagctttccgcctgtgaagcgctgctgagcctg
ttgccacaggagggcgacgcgcaggcggcgtcactcgcagcagacgaactaccgcgcgcg
ggccaggagatccatacgcgctgtttatcgctggaagcgcagtggcagacactcggcgcg
cagcttctgcaggagcgcgcgcgctaccagaatgcggtgcaggcatttgacgcagcgctc
gccgtaagcccgtttgcggataaagcagcgtttctcgccgccctgctggatgacgccacc
cgaagccaccttgaagcccaaaaacagcggctggagcgcgagcgtgaaacgcagcacacg
ctgctcgcacaggcgcagcaggcgctggagcgccacctgagcgcgcgcccggaagccatg
gacgacacggctgacgcacagcagagcgaagctgcgctcacggcagtgacagagcaactg
cgtgataacaccacgcgccagggcgagctgcgccagcagttgcgccaggacgaagagagc
cgcactcagctcgccgcacttcttggccagattgacgaagccaggcgcgaggccgacgaa
tggggccagctcaaccatctggtcggctcgcagaaaggcgataaattccgtaagttcgca
caggggctgacgctggataatctggtatggctggccaataaccagttagcgcgcctgcat
ggccgctacctgcttaaacgcaagctgagcgaagatctggagctggaagtggtggacacc
tggcaggcggacgcggtgcgcgacacccgcacgctctccggcggcgaaagcttcctggtg
agtctcgcgctggcgctggcgctctcagatctggtgagccataaaacccgcatcgattcg
ctgtttctggatgagggtttcggcacgctggacgcccagacgctcgatacggcgctggat
gccctcgacgcgctgaacgccagcggcaaaaccatcggcgttatcagccacgtggaggcg
atgaaagagcgtatcccggtgcagatcaaagtaagaaagattaacggccttggcgtgagc
cgcctggcgcgcgagtatcaggtcgattaa
DBGET
integrated database retrieval system