KEGG   Callorhinchus milii (elephant shark): 103178626Help
Entry
103178626         CDS       T03088                                 

Gene name
lig4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cmk00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    103178626 (lig4)
Enzymes [BR:cmk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103178626 (lig4)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103178626 (lig4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 914 aa AA seqDB search
MAASTSSDSSLKVTVASKVPFADLCSTMEKIQKNKARADKNKFFQDFLESWRSFHNALHK
NDPNTTDSFYPAMRLILPQMERERMAYGIKETMLAKLYIEVLGLSKDGKDALKLLNYRAP
TSSHGGVGDFAEIAFFVLAQRCSDQCTLTVQEVNEHLDSIALNNSAKRKNQVKKSLLDLI
RQSTALQQKWLIRMILKDMKLGISQQTIFQLFHPDAAELHSVTTDLERVCKQLHDPNVSL
SDVSIMLFSAFKPMLAAVTNIKNIEKQMHNQSFYLETKLDGERMQLHKDGDVYKYFSRNG
YDYTQQFGTSPLVGSLTPFIHRVFKPTIQNCILDGEMMAYNPTTQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNGKKLAHETLRNRHETLQAIFTPVPGRVQVVEKIEMNTKKDVA
DALNEAIDKREEGIMVKDPLSVYKPDKRGEGWLKIKPEYIDGLMDELDILIVGGYFGKGH
RGGMVSHFLCAVAEPPSPGDKPSVFHSLCRVGSGYTMKELYDLGLKLADHWKPYHRRDAP
ANILCGTEKPEVYIEPCNSVILQVKAAEIVKSDMYKTSCSLRFPRIERIRDDKEWYECMT
LNDLDQLQNMAEGKLASKHVDMNDEEPHKKKRKAVPKVKKVVGIAEQFKGQDLSCVDKVS
SIFDDVEFCVLNGPHNHPKADLEKGIAECGGLVVQNPGPDTYCVVADTVNVRVKNLIAAN
THDVVMVDWLLNCLQKKQILPWQPKHMIHMSPSTEEHFAQEYDHYGDSYFVNTDESQLRE
VFKRMDQPEQKFSFETIADLEQRYSWDTSPLSMFRHCVIYMDMDFPSAISDPNSQIRDTS
LDLRALELRYYGAKVVGELNEGVSHVVKHDRGQHLQKLKSLRRTFERKFKIVSESWVTDS
VKAGIVQDERNYLL
NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt
atggctgcatcaacgtcatcagatagttcattgaaagtgactgtagcctctaaagtacct
tttgctgatctgtgttcaacaatggaaaaaatacagaagaataaggctagggcagataag
aataagtttttccaagattttctggaatcatggagaagttttcataatgctcttcacaaa
aacgatccaaatacgactgattccttctacccggcaatgcgtctgattctcccccagatg
gaaagggagagaatggcatatggaatcaaagagacaatgcttgcaaagctttacattgaa
gttcttggattgtcaaaagatggtaaggatgccctgaaactcctaaactatagagctccc
actagctcacatggtggggtgggtgattttgctgagattgcattttttgtgctggcgcag
aggtgttcagatcagtgtacgctaactgttcaggaggtaaatgagcacttagactctatt
gcactgaacaattctgccaagagaaaaaatcaagtgaaaaagagtctgctggacttaatt
agacaaagcacagcactccaacaaaaatggcttatccgtatgatcttgaaagacatgaaa
ctaggcatcagtcaacaaactatatttcagttattccatccagatgcagctgaactgcac
agtgtgacgacggacttagaaagagtttgcaagcaacttcatgatcccaatgtgtccctc
agtgatgtttccatcatgttgttttctgcattcaaacctatgcttgctgctgtaaccaac
ataaaaaatattgaaaagcaaatgcacaatcagagtttctatttggaaactaaacttgat
ggggaacgcatgcagcttcacaaagatggagatgtttataagtatttttctcgtaatggc
tatgattatacccagcagtttggtacttctccgttggtgggatccttgacaccattcatc
catagagttttcaagcccacaatacagaactgtattcttgatggagagatgatggcctat
aaccccactacccaaaccttcatgcagaaaggaaacaagtttgacatcaaaagaatggtg
gaagattcagacctacaaacctgcttctgtgtctttgatgtattaatggtaaacggaaag
aagctggcacatgagactctccgcaatagacacgagactcttcaagcaatttttacacca
gtgccaggtcgtgtgcaagttgtagagaaaattgaaatgaataccaaaaaggatgtggct
gatgctttgaacgaagctatagataaaagagaagaaggaattatggtgaaggatcctttg
tcagtttacaaaccagacaaacgtggtgaaggctggctaaaaattaagccagaatatatt
gatggcttgatggatgagcttgacatcttaattgttggtggttactttggtaaaggtcat
cgcggtggaatggtgtctcatttcttgtgtgctgttgctgaacctccatcacctggtgat
aaaccatcagtcttccactctctttgccgtgtgggttctggttatacaatgaaggagctg
tacgacttgggattgaaactagcagatcattggaagccttaccacagaagagacgcacca
gcaaatattttatgtggcactgaaaagccagaagtctacattgagccttgtaattctgtc
attctgcaagtcaaagcggctgaaattgtgaagagtgacatgtataaaacaagctgtagc
ttgcgctttccccgaattgaaaggatccgagatgataaagagtggtatgaatgcatgact
ctgaacgatttagaccagcttcaaaatatggcagaagggaaacttgcatccaaacatgtt
gacatgaatgacgaagaaccacataagaaaaagcggaaagctgttccaaaggtcaaaaag
gttgttggcattgcggaacagttcaagggccaagatctgtcgtgtgtggacaaagtgtcc
agcatttttgatgatgttgaattctgtgtcctgaatggtcctcataaccaccctaaagct
gatctggagaagggaatagctgaatgtggaggattggtcgtgcagaaccccggaccagac
acatactgtgttgttgctgacacagttaatgttcgtgtcaaaaaccttattgctgcaaac
acacatgatgtggtgatggttgactggttgctaaactgtttgcaaaagaagcagattttg
ccatggcaacctaaacatatgattcacatgtcaccttccacagaagaacattttgcccag
gaatatgatcactatggtgacagctattttgtcaacactgatgaaagccagcttcgggag
gtgttcaaaaggatggatcaaccagaacagaagttctcttttgaaactattgcagactta
gaacagcgatattcatgggacacgtcacctctgagcatgttcagacattgtgtcatttac
atggatatggacttcccttctgccataagcgatcccaacagtcagatacgtgacacaagc
ttagatttaagggccttggagctgcggtattatggggcaaaagtcgtcggagaactgaat
gaaggtgtctcacatgtggtcaaacatgatcgtggccaacatctccaaaaactgaaatct
ctcaggagaacctttgaaaggaagttcaagattgtgtcagagtcgtgggtaactgattct
gtgaaagcaggaattgtgcaggatgaaagaaattaccttctatag

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