Cucumis melo (muskmelon): 103491009
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Entry
103491009 CDS
T03195
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103491009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103491009
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103491009
mRNA degradation factors
5'-3' decay
Decapping complex
103491009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Sey1_3HB
GerPC
DUF445
DUF4449
Motif
Other DBs
NCBI-GeneID:
103491009
NCBI-ProteinID:
XP_008449007
UniProt:
A0A1S3BLP7
LinkDB
All DBs
Position
6:31150278..31163677
Genome browser
AA seq
1417 aa
AA seq
DB search
MASPGNPNPNPTNQPFDVQKLFKPTTISNPTPTSQNPTLMNSPPFPPPSSSYPPPTGPFS
YPLQNAPFHHPYHSPHHPNQLPYSQDQFSNLHHQRSLSYPTPPLQPSPPPVNVVVPQNNP
AQSSGARIMAMIRAPGSNLEQFPQPSAPLGSMPSPSSAVPESSTPPPNVPIMTTIPMMQG
VNPGISPTGPIRMPSSKLPKGRHLIGDHVVYDVNVRLQGEIQPQLEVTPITKYGSDPQLV
LGRQIAVNKTYICYGLKQGNIRVLNINTALRSLFRGHEKRVTDMAFFAEDVHLLASVDVG
GRVYVWKISEGPDEETKPQITGKVVISLHMEGGEGEIVHPRVCWHCHKQEVLVVGFGKAV
LRIDTTKVGKGESFSAESPLKFSLDKLIDGVQLVGKHDGEVTELSMCQWMTSRLVSASMD
GTIKIWEDRKASPLLVLRPHDGQPVNAATFLTAPNRPDHIVLITAGPLNREVKIWSSASE
EGWLLPSDAESWKCTQTLELKSSAESQVEEAFFNQIVALSQAGLLLLANAKKNAIYAIHL
DYGLNPASTRMDYIAEFTVTMPILSFTGTSEILDRLTHIVQVYCVQTQAIQQYALDLSQC
LPPPLDNVGLEKADSNVSQDSAGVEGLAALFPSGSKPTDTPFTSSTPRGSVLVNGPESAV
AERYPASTNSQDAVLVANMESKPAILSPVPSNTDVVSTASPPLPLSPRLSRNLSGFRSPV
VAFDPVSAVSDHSGDRHGNDYTVNRQLDAMHTNLSEVSSLDDESRNSEEKIAREDLSTVL
NPPIVFKHPTHLITPSEILMAVSSSETTNIIEGGKSDNETNIQDVVVNNDNEDTELEVKE
VGEMKSPQNGEYGSRGEPQNLSLENKEKYFCSQASDLGMEVARECSALSSETYVVEEAPQ
VDANIIDSEVDSQAGEGDRTSAKDVSEKVPESSISTTLQIPFPSTKWKKNKGKNSQASGF
VSPSPSAFNSNESSTEPCGSSSLPQTDAGFAPLLAIQDTLNQIMSTQKEMQKQMQMTFSV
PVTKEGKRLEAALGRSMEKALKANHDALWARIQEESAKNEKLLRETTQKVTSLVANFVNK
DLPAFLEKAMKKEMSAIGPAVVRTITPAIEKTISSAITDSFQRGVGDKAVNQLEKSVSSK
LEATLARHIQAQFQTSGKQALQDALKSSFEASVIPAFEMSCKTMFEQVDSTFQKGLVEHS
AAAQQHFDSSHSPLALALRDSINSASTIAQSLSGELAEGQRKLIALATAGANASSINPLV
SQLSNGPLGALHEKVEVPLDPTKELSRLLSERKYEEAFTAALQRSDVNIVSWLCSQVDLR
AVLANPLALSQGVLLSLLQQLACDINKDRSRKIAWMTEVAAAVNPADPMIAMHIRPIFEQ
VYQILNHQRTLPTVSPVELTGIRIIMHLVNSMMVTCK
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctgggaatccaaacccaaatcccacaaaccaaccttttgatgttcagaaa
ttgtttaaacccaccaccatttcaaaccctacaccgacttcccaaaaccctaccctcatg
aattcacctccatttccacctccttcttcatcttaccctcctcccacaggtcctttctct
tacccacttcaaaacgccccttttcatcatccttatcattctcctcaccatcccaatcaa
cttccttactctcaagaccaattctctaatcttcatcatcagcgttctctttcttacccc
actcccccgcttcagccttctcctcctccggttaatgttgttgttcctcagaataatccg
gctcagagctctggtgcgaggataatggccatgattagagcccctggttctaatcttgaa
caatttcctcaaccctctgctccattaggttccatgccatctccttcttcggctgttcct
gaatcttcaacgcctcctcctaatgttcctattatgactaccattcccatgatgcagggg
gttaatcctgggatttcgcctactgggcccattcgaatgccgagcagtaagcttccgaaa
gggcggcatttgattggtgatcatgtggtgtatgatgtgaatgttaggttgcaaggagag
atccagccacagcttgaagtgacgccaattaccaaatatggttcagatcctcagcttgtg
ttgggacgtcaaattgcagttaacaagacatatatatgttatggattgaaacaggggaat
attcgagttcttaatatcaataccgctctaagatctttgtttcgaggccatgaaaagagg
gtcactgacatggcatttttcgctgaagatgttcaccttttggctagcgttgatgtaggt
ggacgagtttatgtctggaagatttcggagggccctgatgaagaaacaaagccacaaatc
actggaaaagttgttatctcccttcacatggaaggaggagaaggagaaattgtgcatcca
cgagtttgctggcattgtcacaaacaggaagttttggtagttggatttgggaaggctgtt
ctcaggattgacacaaccaaagttgggaagggtgaaagcttttctgctgaatctcctctc
aaattttctcttgataagttgattgatggagtccagcttgttgggaagcatgatggagag
gtgaccgagttgtccatgtgccagtggatgacttcacgattggtttctgcttctatggat
ggaacgatcaaaatctgggaagaccgcaaggcatcacctttactggttttgagaccacat
gatggccaaccggttaatgcagccactttcttgactgctcctaatcgaccagatcacatt
gtactcataacagctgggcctttgaatcgggaagtgaaaatatggtcatccgcaagtgaa
gaaggttggctgcttcctagtgacgctgaatcatggaaatgtacccagaccttggaattg
aagagttcagctgaaagccaagttgaagaggctttctttaatcaaattgtagcactgtct
caagctggcctccttttgcttgctaatgctaagaagaatgctatatatgcaattcacttg
gattatggtcttaatccagcctcgacacgaatggattacatagcagagtttactgtcaca
atgcccattttaagttttactggaacaagtgaaatattagaccgtctaacacatattgtc
caggtttattgcgtacaaacacaagcgattcagcagtatgctttggatttgtctcagtgc
ttaccaccaccattggacaacgtagggttagagaaggcagattctaatgtttcacaggat
tctgctggtgttgaaggtctggctgcattgtttccttctgggagcaaaccaactgacaca
cccttcactagttctacacccaggggttcagtgctggtcaatggccctgaaagtgctgtt
gcagaaagatacccagcaagcaccaattctcaagatgcggtgttggttgcaaatatggaa
tctaaacctgctatactgtcgcctgtacctagtaacacagacgttgtctcaactgcatca
cctccacttcctctgagcccccgcttgtccagaaatctgtctggttttagaagtccagtg
gttgcctttgaccctgttagtgcagttagtgatcattccggtgaccgacatggtaatgat
tatacagtcaaccgacaattggatgccatgcacacaaatttgtctgaagtgtcttccttg
gatgatgagtccagaaacagtgaggagaaaattgcacgggaagatttgtctactgtcctc
aatcctcctatcgtgtttaagcatccaactcatcttattactccctctgagatactgatg
gctgtttcttcgtctgaaacaaccaatatcattgaaggtggtaagagtgacaatgagaca
aatatccaggatgtagtggttaacaacgataatgaagatacggagctggaggttaaagag
gtgggtgaaatgaagtctcctcaaaatggtgaatatggtagtagaggtgagcctcaaaac
ctttctctggagaacaaggaaaaatatttctgctcacaagcgtcagatcttggtatggaa
gtggcccgggagtgtagtgcactatcatctgaaacttatgtcgttgaggaagccccgcaa
gttgatgctaatataattgactcagaggtagattcccaagctggtgagggagatagaact
tccgcaaaagatgtgtctgaaaaggttcctgaatcatctatatcaacgactctgcaaatt
ccatttcctagtacaaagtggaaaaagaacaaggggaaaaattctcaagcttcaggcttt
gtttcaccatctccaagtgcttttaattctaatgaatcttccactgaaccttgtggtagt
tcaagccttccccaaaccgatgcaggctttgctcctttactggccatccaagatacgttg
aatcagataatgagcactcagaaagaaatgcaaaagcagatgcagatgacattttcagtt
ccagtcactaaagaaggtaaaaggctggaggcagctcttggccggagcatggagaaggca
ttgaaagcgaatcatgatgcattatgggctcggattcaggaagaaagtgctaaaaatgag
aaattgttgcgagaaactacacaaaaagtaactagtttagttgcaaactttgtgaacaag
gacttgcctgcctttttagagaaagctatgaagaaggaaatgtctgccattggacctgct
gtggttcgcacaataacaccagctattgagaaaacaatttcttctgccattactgattcc
ttccagagaggagtaggtgataaggcagtaaatcaactagagaaatctgttagctcaaag
cttgaagctacgcttgctaggcacattcaagcacagtttcaaacctctggcaaacaagct
ctgcaggatgcactaaaatctagttttgaagcatcagtgattccagcctttgaaatgtcg
tgcaaaaccatgtttgagcaagtagattctacctttcagaaaggattggttgaacattca
gctgcagctcaacaacacttcgactcttcacattctccattagcacttgctttgagggat
tctataaattcagcttcaacaattgcgcagtccttgagtggagaattggctgaaggccaa
agaaaactgatagcccttgcgactgcaggagcaaatgctagttcaataaatcctttagtt
agccaactaagcaatgggccattgggtgctctccatgagaaggttgaggttcctttggat
cctacaaaagaactgtcgagactgttatctgaaaggaaatacgaggaagctttcaccgct
gctttacagagaagtgatgtgaacattgtctcttggttatgttctcaggttgatcttaga
gccgtcttggcaaatccccttgctttgagtcaaggagtactgctgtcccttttgcaacaa
ttagcatgcgatatcaacaaggatagatcccggaaaattgcatggatgactgaagtggct
gctgctgttaatcctgcagacccaatgatagcgatgcacatacggcctatcttcgaacag
gtgtatcagattttgaaccaccaacggaccttgccaacggtttctccagtcgagctcacc
ggcattcgcataatcatgcatcttgtcaactccatgatggtaacttgtaaatga
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