Cucurbita moschata (crookneck pumpkin): 111432526 Help Entry 111432526         CDS       T05248                                  Name (RefSeq) protein RRP6-like 2   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03018   RNA degradation Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     111432526  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmos03019]     111432526 Messenger RNA biogenesis [BR:cmos03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      111432526 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 HRDC PMC2NT Motif Other DBs NCBI-GeneID:  111432526 NCBI-ProteinID:  XP_022925220 UniProt:  A0A6J1EHB5 LinkDB All DBs Position Unknown AA seq 955 aa AA seqDB search MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPADKDFHFYYSFDEFKIPIQSIER QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDMSLDEFQRIRKEEEE SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLPVLDFVDKINADFQPVY PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL ERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRMKLSSM PRESEESDFPLVEVYKRSCDVCLHLYEKELLTENSYLYVYGLQGSGFNAQQLAVAAGLFE WRDAVAREEDESTGYILPNKTLLDIAKQMPVTINKLRRLLKSKHPFLERNLASIVTIIRH SMLNSCAFEEAAERLKEACAEAASEEQASTSEHQDTNISDISNLRHVIPITKVNAAENTA NGPIFSPSSQSKVAPLEHGYRPFVPGKILKVDHSLHPVLNGSRQVSQVGPTTSEPSKHSN GDKYPVAQVTGLNISLQRKGNRGGLGSLLGTSAPKRKLDTDKKDNEENKLDKIRSSVCLP FHSFSGTSEQSKSVTEPTTMTLLKTQNSEAPAAESTKSSNIEPPVMPVPKPCPEEVILLE DDSDEEFEDEEPHPVAENTDEPKLKGFSANSPLEIDGDGNDDEDEPMSLSELSSSFQKCL NSNEQAMNLGKTDNPGKQSAFLQIKPFDYDAARKQVVFGEGMAENSEPEDDKAVKPSKNA AGANKVVKPSKNAAGAKLDLGLDKVEKNSGAAVELPQGKRRHAFPATGNRSATFR NT seq 2868 nt NT seq  +upstreamnt  +downstreamnt atggatgttgatcagtctgattcacagaaggctcagaccttacaatccctaaccagtggt tctctcggttcgtctctgtccaagctcgccggctcttcccggggtattccggccgacaaa gactttcacttttattacagcttcgacgaattcaaaatcccgatacagagcatcgagcgg caatctcagtcgatgctcgagaccattggctcgtccgccgaagtttggggcaaggaaatg gcgttccctgaggataccgacgacgcgtatgattggttagttaatgttaatgatgaaatt tttgagcggtttgatatgtctctggatgagtttcagaggattcggaaggaggaggaggag agtgggagggctgtggctttaatggcggactctaacgatgggtttcagttggtgtgtggg aagaagaagaaaactccgagtcatggagacgaggtgcatgattcgagttttgagtcgagt gtgaaggttgctaccaaggataggaaaactttgggggtgaagccgaaagtgccatttcat ataccgactatccgtagaccgcaggatgagtttaatattttggttaataattcaaatcag ccgtttgagcatgtctggttggaaaggagtgaagatggctcgcggtttgcacatccactg gagaagctccctgtattggactttgtcgataagattaatgcagattttcaacctgtttat ccaccatctttggattgtactcccttcaaattcatagaggaagtcaatgatttgaaagaa ctggctgctaaattgcaaggagttaatgaatttgcggttgatttggaacataaccagtat cgatcttttcaaggacttacatgcctgatgcaaatttctacaagaactgaggattttgtt gtagatacgctgaagctcagaattcatgtggggccctacctgagagaggttttcaaggat ccttcaaagaaaaaggtgctgcatggagcagatcgagacattgtgtggcttcaacgggat ttcgggatttatatttgcaacttgtttgacactgggcaggcttcaagagtattgaaactg gaaagaaatagtctggagtatctccttcatcacttttgtggtgttgcagctaataaagag taccagaatgcagattggagattaagacctctccctgaggagatgctgagatatgcgagg gaagatacacattatttgctgtatatttatgatttgatgaggatgaaactgtcctcaatg ccccgtgaatctgaagaatctgattttcctctggtagaggtttacaagcggagttgtgat gtatgcctgcatctttacgagaaggagctgttgactgaaaactcatatctttatgtgtac ggattgcagggttctggtttcaatgcacaacaacttgctgttgctgcaggtctctttgag tggcgagatgctgttgcccgtgaagaggatgaaagtaccggttacatattgccaaacaaa acgcttcttgacattgccaagcagatgcctgtcacaattaacaaattacgtagactactg aaatcaaagcacccatttcttgagcgcaatcttgcttcaattgttaccatcattaggcat tcgatgctgaattcttgtgcattcgaagaggctgctgagcgtttgaaggaagcctgtgca gaggcggcatcagaagaacaggcatccactagtgaacatcaagatacgaatatatcagat atttcaaatttgagacacgtaatcccgattacgaaggtcaatgctgcggaaaatactgcc aatggtccaatcttttctccttcttcccagtcaaaagttgctcccttggaacatggatac cggccctttgtacctggaaaaattttaaaggtagaccattctctgcatcctgttttgaat gggagtagacaggtttctcaagtcggtccaacaacttcggagccgagcaaacactcgaat ggagataaatatccagtggcacaggttactggactgaacatttcattgcaaaggaagggt aaccgaggtggtctcgggtcactattgggaacctcagccccaaagagaaaattagatacc gataaaaaggataatgaagagaacaagttggataaaattcgatcctctgtttgtctaccc tttcattcattctcgggaacgagtgaacagtcgaagtcagttacagaaccaacgaccatg actctactaaaaactcaaaattcggaagcacctgctgctgagtcgacaaaaagttcgaat attgagcctcctgtgatgccagttccaaaaccctgcccagaagaggttatattgttagaa gatgattcagatgaggagttcgaagatgaagaaccacatcctgttgcagaaaacaccgat gagccgaagttgaaaggttttagtgctaattcgcctcttgaaatcgatggcgacggaaat gatgatgaagatgaaccaatgtccctgtctgaattgtcttctagctttcagaaatgtttg aattcaaatgaacaagctatgaaccttggaaaaactgataatccaggaaaacaaagtgcc tttttgcagatcaaaccgttcgactatgatgcagctaggaaacaagtagtattcggagaa ggtatggcagaaaactcggaaccagaagacgacaaagctgtaaagccatcaaagaatgct gctggggccaacaaagttgtgaagccatcaaagaatgctgctggggccaagttagattta ggtctagataaagtcgaaaagaacagtggcgccgccgtggaattaccgcaaggaaaacga cgccatgccttccctgcaactggaaaccgaagtgcaactttccgctaa

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