KEGG   Cucurbita moschata (crookneck pumpkin): 111459170
Entry
111459170         CDS       T05248                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030  DNA replication
cmos03410  Base excision repair
cmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111459170
   03410 Base excision repair
    111459170
   03420 Nucleotide excision repair
    111459170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmos03032]
    111459170
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111459170
Enzymes [BR:cmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111459170
DNA replication proteins [BR:cmos03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    111459170
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      111459170
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 RNB
Other DBs
NCBI-GeneID: 111459170
NCBI-ProteinID: XP_022957705
UniProt: A0A6J1H1A3
LinkDB
Position
Unknown
AA seq 2203 aa
MSGDSRRRGRADNSRSKKQRIIRSAEEEIESKLGFDLFSEGDKRLGWLLTFASSALEDQD
TGKIYSCIDLYFVAQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGQIADIEIL
EKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLRVVESNWAKSDAAEAYDSILFGK
REQKPQDFVECIVDLREYDVPYHVRFAIDHDVRCGQWYDVSVSSTGVSLEKRKDLLQRAE
VHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGHGYLIINRECVGEDIENLEYTPKPEY
EGFFKVTNVKNELELLKFWFAHMREVKPGIYVTYNGDYFDWPFIESRAAYHGFKMSDEVG
FQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYQANVVCPNKHLSDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYD
QLINNLDRDLQYAIQVEGKTDLELVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVA
AMYPNIILTNRLQPSSIVTDEVCTACDFNRPEKTCLRKLEWVWRGEVFMAKKSDYYHLKN
QIESEFVDSGSARLSKSFLELPKLEQQAKLKERLKKYCQKAYKRVLDKPVNEVREAGICM
RENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCAL
PGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKIYKTHSECSIE
FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF
DKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQK
SCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYV
RKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVR
EKDDKFRQQKVADMFASSNRGKHSKKNSDVSCSKHVVNEDNSDDLEDFQKKTNSTNGPKP
VARCYDVRGMKHSSTSYSEINSKVQDNFNEGCEPSSPLHVENIDKNVDYNGWLEMKKRKW
KDTLDKRKKQKLVSLRTPGAANDVTRELKGATNNKEAPRTGVGSYFKRHEGSITRFHWQI
LQLVQSSQSGQYFAWAVVEGVMLKIPITVPRVFYLNSKVPITDEFVGRRVNKTLPHGRHS
YNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSILQIGCVCKVDKTAKKR
NIQDGWSLDELQMKTTTECNYLEKPISFFFVYHSISEGRAIYITFFPSTRSIVVVIVSPY
QNKDLSSTFLERQFRETCQILSGESQPFESGITCKVDYVVNIKEAEVILQRSITEHRSLN
HGPIVAVIQCPNVQLLKSGVRALDDFPSVSIPFNARDSQYQVLGWQQTAAKIGMQRCAAS
SQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINM
EDVCFVDEVQQPVLTYPGAYRKVSVELKIHHLAVNALLKSSQVNEMEGGSLFGFEHDMQY
GAQLSNEDSGFEEASSSAPTFRVLKQLIQRCLADAVTSGNVYADAILRHLYRWICSPQSR
LHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSKIIIDTGRFDLQTAKAYCDSLL
KTVQTRDLFEWIELEPLQFWHSLLFMDQFNYGGIPAKDDESTDIESQVDIVANWNIAEYL
PKKIQDHFVFIISQFLYIPWNYATKQAEARESLPLGDTCTPSITVAAAESFEYHVTEHLK
EQLSSYFSDKLLGIVRDIVLHMKGMDKNTQDILPDQPSGSIHKGDAALEFIKLVCAVLAL
DQNVLHDVLVMRKNLLKYVRVREFAPEAEFSDPCSSIILPNVICSYCDDCRDLDLCRDSA
LLAQEWRCAVPQCEQPYNREVMENALLQIVRQRERLYHLQDLVCVRCKQVKAAHLSEQCA
CAGSFQCKDVEDFFSKMRILLNVATRQKFQLLQEFTSWILEVS
NT seq 6612 nt   +upstreamnt  +downstreamnt
atgagcggcgatagccgaaggcgaggccgggcagacaacagtaggtcgaagaagcagagg
ataatccggtccgccgaggaggagatcgaatcaaagcttgggtttgatcttttctctgaa
ggcgataagaggcttggatggttgctcacttttgcttcttcagctttggaggatcaggac
accggaaagatctatagctgtatcgatctttattttgtggcacaggatggcagcagtttc
aagtcaaaatataagtttcgtccttacttctatgcagcgacaaaggacaaaatggaaact
gatgtggaggcttatttgagacgacgttatgaaggtcaaatagctgatattgagatttta
gaaaaagaagaccttgatcttaagaatcatctgtctggcttgcgcaaggcatatttaaag
ctatcatttgacactgttcaagaattgatgaacgtgaagagtgaattgttgcgagttgtt
gaaagcaattgggcaaagtctgatgctgcagaagcatatgattctattttatttgggaaa
agggaacaaaagcctcaagattttgtagaatgcattgttgatcttcgagagtatgatgtt
ccttaccatgttcgctttgctattgatcatgatgtgcgctgcggacaatggtacgatgtt
agtgtatcaagcactggtgtttcacttgagaagagaaaagatcttctgcaacgtgctgaa
gttcacatatgtgcatttgatatcgagaccacaaagctaccattaaaatttccagatgct
gaatatgacatgataatgatgatttcctatatggttgatggacatgggtacttgattatc
aacagagagtgtgttggagaagatatcgagaatttggagtacactccaaaaccagaatat
gaagggttctttaaagtgaccaatgtgaaaaatgagttagagcttctcaaattttggttt
gcccatatgcgagaggtgaaacctggtatctatgttacctacaatggcgattattttgac
tggccattcattgaaagcagagcagcgtatcatggatttaaaatgagtgatgaagtagga
tttcaatgcgacaagaatcagggggaatgccgttctaaatttgcttgtcatttggattgc
tttgcgtgggttaagcgtgatagttatcttcctcagggtagccaaggtttgaaggccgtt
acaaaagctaaattgggttatgatcctcttgaagtgaatcccgaggatatggtgcggttt
gcaaaggaaaagcctcagatgatggcgtcctattcggtttcagatgctgttgctacatac
tacttgtacatgacctatgttcatcctttcattttttctctagcaactattattccgatg
tcaccagatgaggtgttgcgcaaaggaagtgggaccctttgtgagatgcttctaatggtt
caggcttaccaggctaatgttgtgtgtcctaacaaacatctatcagatccagagaaattc
tataacaaccggcttcttgaaagtgagacatacataggtggtcatgtagaatgcctggag
agtggtgtatttagatccgaccttcctaccagttttaggcttgatccatctgcctatgat
caattgataaacaatctggatcgagatctgcagtatgccatacaagtagaaggaaaaaca
gacttggagttagtgtcaaattatagtgatgtgaagaatgcaatcatggaaaagcttatt
agattgcgggatgagcctgtacgtgaagagggccctctgatatatcaccttgatgtagct
gcaatgtatcccaacattattttaacaaatagacttcagccgtcgtcaatagttacagat
gaggtttgcactgcttgtgatttcaatcgtcctgagaaaacttgtctacgaaaacttgaa
tgggtttggcgtggagaagtattcatggctaaaaaaagtgactattatcatctgaagaat
caaattgagtctgagtttgttgatagcggtagtgctcggttgtcaaaatcatttcttgaa
cttccaaagttggagcagcaagcaaagctcaaagaacgtttaaagaaatactgtcagaag
gcttataaacgagtacttgataagccagtcaatgaagttcgagaagcagggatctgcatg
agagaaaactctttctatattgacactgttcgtagttttcgagatagaaggtacgaatac
aaagggctcaataaagtatggaagggaaaattatcagaagctaaagcgagtggaaattcg
atcaagatccaggaagcacaagacatggtagttctttatgattctctacaactcgctcat
aaatgtatcctcaactccttttatggatatgtgatgcgaaagggtgctcgatggtattca
atggaaatggctggggtagttacatatactggagcaaaaatcattcagaatgctcgtctg
ttaattgaaaaaattggaaaaccattggagttagacaccgatggtatctggtgtgcgcta
cctggatcattcccagaaaactttaccttcaaaacaaaagatctgaagaagttgacaatt
tcatatccatgtgtaatgcttaatgttgacgtggcaaggaacaacacaaatgaccagtat
cagacgcttatagatcctgtgaagaaaatatataaaacacatagtgaatgctcaattgaa
tttgaagtagatggaccatacaaggcaatgatccttcctgcttccaaagaagaaggcatt
ttgatcaagaaaagatatgctgtcttcaatgatgatggaacacttgcagagctaaaaggc
tttgagattaagcgtaggggggagttaaagctcatcaaagttttccaggctgaacttttt
gacaagtttcttcacggttccaccttagaagaatgctattcagttgttgcatctgttgca
aatcgctggctagatcttctagataatcaaggaaaagatattgcagatagcgagttgctt
gattatatatctgaatccagtaccatgagcaaatctttggcagactatggagagcagaag
tcttgtgctgttaccaccgcaagacgtcttgcagattttcttggtgatacaatggtcaga
gataaaggcctacgttgtcaatatatagttgcatgtgaacctaagggaacacctgtaagt
gagcgtgctgttccagttgcaatctttgagactgatgcagagattatgaaattctatgta
cgtaaatggtgcaagatttcatctgaagttggcatccgatccatcattgactggtcctac
tacaagcaacgtctaagctcagccattcaaaaaattataacaattccagcagccatgcaa
aaggttgcaaatcctgttcctagggttgtccatcctgattggttacataagaaagttcgt
gagaaggatgataaatttcgccaacagaaagtagctgatatgtttgcatcctcaaacaga
ggtaagcattcaaagaagaatagtgatgtcagctgcagcaagcatgtggtgaatgaagat
aattctgacgatttagaagattttcaaaagaaaacaaattctacaaatggccccaaacca
gttgcccgatgttatgatgtcagaggaatgaaacattcaagtacaagctatagcgaaata
aactccaaggtgcaggataattttaatgaaggatgtgagccttcttcacctttgcatgtt
gaaaacattgacaaaaatgtcgattacaatggatggcttgaaatgaagaagcgaaagtgg
aaggataccttggacaagaggaagaagcaaaagctggtaagtttaaggactccaggtgct
gctaatgatgtaacacgggagttaaagggtgctacgaataataaagaggctcctagaaca
ggtgttggttcatattttaagaggcatgaaggatctataacacgcttccattggcagatt
ttacagcttgttcagagttcacagagtggccaatattttgcttgggcggttgttgaagga
gttatgctaaagattcctattactgttcctagagttttttaccttaattccaaagtacct
attacagacgaatttgtgggtaggcgtgttaacaaaacgcttccccatggaaggcacagt
tacaacctttatgaggttgtgactgatgaaggtcaatttagaacacagaggaacaaactt
gcagccctccttgcagacccagaagtagagggaatctatgaaagcaaggtaccattggag
ttcaagtccatccttcagattggttgcgtctgtaaagttgataaaactgctaaaaaacga
aatattcaagatggatggagtctggatgaactgcaaatgaagactacaacagaatgcaat
tatctggaaaagccaatctctttcttctttgtgtatcatagcatttctgaaggaagagct
atctacattactttttttccctccacgagatcgatagttgtggtgatagttagtccttac
caaaacaaagacttgtcatcaacttttcttgaaaggcaatttcgcgaaacttgtcaaata
ctgtccggtgaatcacaaccatttgagagtggtataacttgtaaggttgactatgttgtt
aacatcaaagaagctgaagtgattttgcaaagatcgataacagaacacaggagcttaaac
catggacctattgtagctgtaattcaatgcccaaatgtgcaactgctgaagtcaggtgtt
cgagcattagatgattttccatccgtgagcattccttttaatgctcgggatagccaatat
caggttcttggttggcaacaaacagctgcaaagattggaatgcaacgttgtgctgcatca
tcccaatggttgaatgagagaatctctcttgcaagatatgcccatgtaccattaggaaat
tttgaacttgattggctaatttttacagcagatatatttttttcaagagcactacacgat
caacagcaggtactttggatatcggatgatggtgttccagatataggaggcattaacatg
gaagatgtgtgttttgtggatgaggtccaacaacctgttctgacgtaccctggagcatat
agaaaagtttccgtggagctgaagatccaccatttggcggtcaatgccctgctgaagagc
agccaagtgaatgaaatggaaggaggtagtttgtttggctttgaacatgatatgcaatat
ggagcccaactttctaatgaagacagtggctttgaagaggcttcatcatctgcgccgaca
tttcgtgtcctgaaacaattgatacaaaggtgtcttgcagatgctgttacatctggaaat
gtatatgctgatgcaattttgcggcatctgtaccgatggatttgcagcccccaatcaaga
cttcatgaccctgctcttcatcgcttactccacaaggttatgcaaaaagtgtttgctctt
ttgttggctgagctacgtaaattaggtgccaccattatatttgcaaacttctcaaaaatt
attatagacacgggaaggtttgatctccagactgctaaagcatattgtgatagcttgctg
aaaacagtgcaaacaagggatctgtttgagtggattgaattggaaccgttacagttctgg
cactccctgttgtttatggatcagtttaactacggtggaatcccagcaaaagatgatgag
agcacagatattgaatctcaagttgatatagtggccaactggaacattgctgaatatcta
cccaagaagattcaggatcacttcgtttttatcatctctcaatttttgtatattccatgg
aattatgcaaccaaacaagctgaagcaagagaatcattgccgcttggtgacacatgtacc
ccgtccattacagttgcagctgccgaatcgtttgaatatcatgttacagaacatctcaaa
gagcagctaagctcttacttcagtgacaaactgttgggaattgttcgtgatattgttctt
catatgaaagggatggacaaaaacacccaggatattttaccagatcaaccttcgggtagc
atacataaaggagatgctgcattggaattcattaagctcgtatgcgctgttttggctctt
gatcaaaatgtcctgcatgatgttctggtaatgaggaagaatttactgaagtatgttcgt
gtaagagagttcgccccagaagcggagttttctgatccatgctcgtccataatcttacca
aacgttatttgcagctactgtgatgattgtcgagatttggacttgtgccgtgactcggct
ttactagcacaagaatggcgctgcgccgtgccacaatgcgaacaaccatacaaccgagaa
gtgatggagaacgctctgcttcaaatcgtgaggcagagggagcgcctctatcacctacag
gatctggtatgcgttcgctgcaagcaagtcaaagcagctcatttgtcagaacagtgtgct
tgtgctggctcatttcaatgcaaagatgtggaagatttcttcagcaagatgaggattctc
ctcaacgtagccactcgtcaaaagttccaattgttgcaagagttcacctcctggatctta
gaagtctcataa

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