Chamaesiphon minutus: Cha6605_0195
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Entry
Cha6605_0195 CDS
T02414
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03410
Base excision repair
cmp03430
Mismatch repair
cmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cha6605_0195
03430 Mismatch repair
Cha6605_0195
03440 Homologous recombination
Cha6605_0195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_0195
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cha6605_0195
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cha6605_0195
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cha6605_0195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AFY91498
UniProt:
K9UA51
LinkDB
All DBs
Position
complement(210628..212994)
Genome browser
AA seq
788 aa
AA seq
DB search
MANSILDWQLPPQIEIPPEFIAAIRKCKPTVNGKYAAKLLWQRGLREIDRLPGYLDCDKY
QPSSPFAFGMEMTAAVERLKKAYIYAEKVAIWGDFDADGVTATSVLWDGLGQFFARGERL
SYYIPDRMKESHGLNVAGIKKLAAQGITLIITCDTGSTNIKEVEYATKLGVDVIVTDHHT
LPAKRPPVTAIINPRYFESEHPLFHLSGVAVAYKLVEALYVALPDIPKQPVEYLLDLVAI
GLIADLVQLSGDCRYLAQQGIKRLTQQNQPDIDGFRPGVHKLLQLCKRNGDRPTDISFGI
APRINAISRIHGDASFGVELLTSKDVDRCHELAAETELANTRRKELQKNTTLKVQSKLSD
LDLSTTSVIVLVDSNWSPGVLGLVAGQVAQEHGKPTILLSTNSDGDAGKEKVKVARGSAR
STQNIDLYQLVNSQSHLLNSFGGHPFAAGMSIDLDNIPLFTEAINQQLQAKLGTIPPPSI
ATDLLVTLADLQVSNGRELFEDLLLLEPYGMGNPVPKLLIKNCQFKDIKNRNIQDFKGKT
VQYIRTKFELFDATSSKGFPGIWWGHYEHEIPRVNCDAIVELDFNSYEKRFEIRLVEVRP
AAIDNKSLNFSDRQFNLKVLDFRQESVDSAAIDSEPIIWVKQCPSDWDELQCYCQQAIQT
SSKLALNYQSTNLATNSEILQQLLGIAKYAIQTCESINLYRLRSRLNISDRAMRLGLDAL
VEIGFDVSLNNQTNLVTITLSQLQERNELDLYSLITVREFFAAIEEEQFKRNYFLHVPVY
AIEASLSH
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcaatcctagattggcaattaccaccccaaatagaaattccccctgaattt
attgcagcgatccggaaatgtaaaccgacggtaaatggtaaatacgcagcgaaattatta
tggcagcgggggctaagagagatcgatcggttacctggatatttggattgtgacaaatat
cagccgagtagtccctttgccttcgggatggaaatgacggcggcggtagaaagattgaaa
aaagcctacatttacgccgaaaaggtggctatttggggcgattttgatgcggatggagta
acagcgactagcgtactttgggatggattggggcagtttttcgcgcggggagaacggctt
agttattatattcccgatcgcatgaaggaatctcacgggttgaatgtggcagggattaaa
aaattagccgcacaaggaattacgctaattattacttgcgatacgggtagtacgaatatt
aaagaagttgaatatgccactaaattaggtgtcgatgtcatcgtcaccgatcatcatact
ttgcctgcaaaacgtccgccagtaacggcaattatcaatccacgttattttgagtccgag
catccattatttcatttatctggggtggcggtagcgtataagttagtcgaggctttatat
gtagctttgccagatattccgaagcaaccagtcgagtacttattggatttagttgcgatc
gggttgattgcagatttggtgcaattgagtggcgattgtcgctatttggcgcagcaaggt
atcaagcgattgacgcagcaaaatcagccggatatcgatggtttccgtccgggagtgcat
aagttattacaattatgtaagcgcaatggcgatcgaccgacagatatttcgtttggaatt
gcaccacgtattaatgcgattagtcggatacatggcgatgctagttttggggtagagtta
ttaactagtaaagatgtcgatcgctgtcacgagctagccgccgaaactgaactagcaaat
acgcgccggaaggagttgcaaaagaatacgacgctcaaggttcagagcaaattgtccgat
ttggatttatctactacttccgtaattgttttagtagatagcaattggtcgcctggagtc
ttaggtttggttgccggacaggtagctcaagaacacggaaaaccaacaattttattgagt
acgaatagcgacggtgatgcgggtaaagaaaaggtaaaagttgcgagaggttcggcgcga
tcgactcaaaatattgacctgtatcaattagtcaattctcaatcacatttactcaatagt
tttggcggacatcctttcgcagcggggatgagtatcgatctagataatattccgctattt
acagaagcaattaaccaacagttacaggcgaaactcggtaccattccacccccatcgatc
gcgacagatctgctcgttactttagccgatcttcaggtgtcgaatggacgagagctattt
gaagatttactattgctcgaaccttatggtatgggcaatccagtacctaaattattaatt
aaaaattgtcagtttaaagatatcaaaaatcgcaatattcaagactttaaaggtaaaaca
gttcaatatattcggacaaaatttgagctgttcgatgctactagctctaaaggcttccct
ggtatttggtggggacattacgagcatgagattccgcgcgtaaattgcgacgcgatcgtc
gaactggattttaactcctatgagaaaagatttgaaatccgcctagtcgaagtccgtccg
gcggcgatcgataataaatctctgaattttagcgatcgacaatttaatttaaaagtactc
gattttcgtcaagaatcggtcgattcagccgcgatcgattccgagccaattatctgggtg
aagcaatgtcccagcgattgggatgagctacaatgctattgtcaacaagcaattcaaaca
agcagtaagctagctcttaattatcaatctaccaatctggctactaatagcgaaatactt
cagcagctacttggtattgctaaatacgcgatccagacttgcgaaagtattaatttatat
cgattgcgctctcgtctcaacattagcgatcgagcgatgcggctgggtttagatgcgcta
gtagaaattggttttgatgtgtcgttaaataaccaaactaatttggttacgattacgtta
tctcaactgcaagaacgaaacgagttagatctgtattcgttaattactgtccgagaattc
ttcgccgcgatcgaggaagaacaattcaagcgtaactattttctccatgtgccagtttac
gcgatcgaagctagtttgagccattaa
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