Chamaesiphon minutus: Cha6605_6002
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Entry
Cha6605_6002 CDS
T02414
Name
(GenBank) helicase family protein with metal-binding cysteine cluster
Organism
cmp
Chamaesiphon minutus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
SNF2-rel_dom
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AFY96847
UniProt:
K9UP36
LinkDB
All DBs
Position
pCHA6605.01:34956..40025
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AA seq
1689 aa
AA seq
DB search
MLDIFALRNQIIDDYHRYIESFLNIKDKKVKTFVDEELAKGELWQDPLIQLNPAYQKGAS
INELIDRDILHPDCGKYFHGYQFYQHQAQAFVAAQSQQPYVLTTGTGSGKSLSYVVPIID
DILRNPEIKGVRAILVYPMNALINSQKEEFDKFIKKVTNSPIRVEQYTGQESLERKTEIQ
NNPPQIILTNYVMLELMLTRVHEAEFVKSEDLKFLVLDELHTYRGRQGADVAMLVRKLRQ
RSGRDLLCIGTSATMSTEGDRQHRRQTVAGVASKLFGVEVTMENVIDETLVRAIKRPTPT
TKELRDSVLAVLPGEIDRTLDKFQAHPLSAWIEMNFGLKEESSGLVRRQPISLTDGAQQL
AEITQLAIEKCTEVLQEMFLWGSKTKGLAFRLHQFIAQGGSVYSTLERAEPRFLTLEGQY
TTTNDRLLYPLVFCRECGQDYYVVKFDRDRELITPLLPNSIDADNDSETICEGYLTLDEP
ELWSAEHLDSLPDSWFKETKRDGRVLKKEHEKYNPQQLFVNPNGTIALTGIGNGHEKPTP
CWFVPRPFKICLNCKVVHNGRKNEFTKLSRLSSEGRSTATTLLSISTVSKLKASLDADST
AAKVLSFTDNRQDASLQAGHFNDFVQTSFLRASLYGALKTSGALDQSQIAAAVVKQMGLA
QTDYAEQPAEFGVGKKRNEEAFTQLIEYRLYEDLRRGWRIVQPNLEQSGLLQINYLELDL
ACADTGLWLKHSDPILLKATPEERYRAILPLLNLLRKELAIDAKFLQADGIDELKRKVNQ
ALKEPWTIGETENLPSASWASLTKGEPRDRTKNKVKLTATSKIGKFLRSPAAWSWLNQSL
KPDDYDRLIHNLINALCDSGYLTQEGTDVQLRSDSIVWQGCKLDRIAPDLLENRYSAIEQ
VEHRPVNKFFQKFYIETAAQIRHMCGREHTGQVPNYLRQEREEEFRQGKLATLFCSPTME
LGIDISDLSVVHLRNVPPSPANYAQRSGRAGRSGQEAMVITYAAAGSGHDQYFYRHQAAM
VAGAVAPPKLELANQDLIKSHIYSVWLGLAGVQFGDSMNQILDLEQPKYPLKENLRTQLE
RMGQPIFHHNCVNATRSILADTFCQTDLNRVSWYSPEWLERTIGNALNEFDNSCDRWRKL
YDDAVTQMTEAQRVLQKVTAGNEAKEEKNRADRSFQEAKHQIDLLVGQGAGKNNSQFEFY
PYRYFASQGFLPGFNFPRLPIYTYLPTGKDRGEYISRPRHLAIREMAPQNILYYEGNKFK
VDRTKRYTQGIDSRYQTLVICDRCGYFHPKLIDVCENCGNKPTSDRSGKPAVIMRALEMD
TMFARRKERITCDEEDRLKNGYQISTCFQFTDGRKEVATVIAADGTPLLRLTYGETANIM
RINRGLRSEKGNGFRLDPTSGQWEPPTNKTDLQTNIQADIHLTVKATTNLLSIEPLDLPE
HERESFITTFQYALERSIQTVYKLEQSELDSERLGQNSDRLLFWEAAEGGAGVLSQILED
PQSFQKLAVSAWEICHFKEHKDNCAQACYECLLSYGNQWDHPLLNRHTIENFLNRLRGSK
LERHSIGLSREEQYQQLLAQTDPNSEFERVVLTAMFDRGLKLPDTAQMYIPEANCKPDFV
YNNGVKIAIFCDGSVHDSPEQKRQDKIDRDNLQYVVGYSVLSIRQSRRDAIGYEEELELG
LQHLAALLA
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatatcttcgccctccgcaaccaaattatcgacgactatcaccgctacattgag
agtttcctcaatatcaaggataaaaaggtcaagacattcgtcgatgaagaattagctaag
ggcgaactgtggcaagatcctctgattcaactcaacccagcttatcaaaagggtgcgagt
atcaatgagttaatcgatcgagatattctccatcccgactgtggtaaatacttccacggg
taccagttttatcagcaccaagctcaagccttcgtcgccgctcaaagtcaacagccctac
gtgctgacaaccggaacgggttcaggtaagagtctgagctacgtcgtcccaattatcgat
gacattctccgtaacccagagattaagggagtacgggcgattttagtctatccgatgaat
gccctgattaactcccagaaagaggagtttgataaattcatcaaaaaagttactaactct
cccatccgcgtcgaacaatataccggacaagagagcctggagcgcaaaaccgagattcaa
aataatccaccccagattatcttgactaactacgtgatgttggaattgatgctgactcgc
gtacatgaagccgaattcgtcaagtcagaggatctaaaatttttagtcctcgacgaactc
cacacatatcgcgggagacaaggtgctgatgtcgccatgctggtgcggaagctcagacag
cggagcggacgagatctgctgtgtatcgggacttcagcaactatgtctaccgaaggcgac
agacagcatcgccgtcaaaccgtggcgggtgtggcgagtaagctctttggggtggaggtg
acaatggagaatgtcatcgatgaaaccttggtgcgggcaattaaacgtcctaccccgacg
actaaagagttgcgggattctgttctagctgtcttaccaggggagatcgatcgcactctg
gataagtttcaagctcatccccttagtgcatggatagagatgaattttggcttaaaggaa
gagtcatctggattggttcgccgtcaacccatttcactcacggatggagcgcaacaatta
gcggaaattacccagctagcgatcgagaaatgtaccgaagttctccaagagatgtttctg
tggggtagtaaaaccaagggattagcattccggctgcatcaattcatcgcccaagggggt
agtgtctattccactctcgaacgtgccgaaccccgcttcctcactttagaaggacaatat
acgacgactaatgatcgattgctctatccgttggtcttttgtcgggaatgcggacaggat
tattatgtggtcaaatttgatcgagacagagaattaattacgccattattacccaactcg
atcgatgctgacaatgattcagaaaccatttgtgaaggctatctcactctcgacgagcca
gaattatggagtgcagaacatttagatagtttgcccgatagttggtttaaggaaacgaaa
agggatgggcgagtattaaagaaagaacacgaaaaatataatccccagcaattgtttgtc
aacccgaatgggacgattgctctcactggcatcgggaatggtcatgaaaagccaacaccc
tgctggtttgtgcctcgtccatttaagatttgtctgaactgtaaagtcgttcacaacgga
cgcaagaatgaatttaccaagctctcgcgcttgagtagtgaaggtagaagtaccgcaact
accctgttatcaatttccaccgtcagcaaactgaaagcatctctagacgcagactcaacc
gcagccaaagttctcagctttaccgataatcgtcaagatgcttccctccaagccggacat
tttaatgatttcgttcaaacgtccttcctcagagcgagtttgtatggagcactaaaaacc
tcaggagcactagatcagagccaaatagctgcggcggtagtcaagcagatgggtttagct
caaacagattacgcagaacaacctgctgagtttggggtggggaagaaaagaaatgaagag
gctttcacccaattaattgagtatcgattgtacgaagatctacgtcgtggttggcggatc
gttcaacctaatttagagcaaagtggattattgcagattaattatttagagctagattta
gcttgtgcagatacaggtttatggctaaaacatagcgatccaatcttactcaaagccaca
cctgaagagcggtatcgagcaattttaccgttacttaatctactccgaaaagagttagcg
atcgatgctaaatttctccaagctgatgggattgatgaactcaaacgcaaggtcaatcaa
gccctcaaggaaccgtggacgatcggtgaaaccgaaaatctcccctcagcatcttgggcg
agtctcactaaaggcgaaccgagagatcggactaaaaataaagtcaaattaacagctact
agtaaaattggtaaattcctccgctctcccgctgcttggtcgtggttaaatcagtcactt
aaacctgatgattacgatcgactaattcacaatttaattaatgctctatgcgattcaggt
tatctcactcaagaaggaactgatgtccaactgcggagtgattcgatcgtttggcaaggt
tgcaagctcgatcgaattgcaccagatttactagagaacagatactcagctatagaacaa
gtcgaacatcgcccagttaacaaattcttccaaaagttctacatcgaaactgctgcccaa
attcgtcacatgtgcggacgcgaacataccggacaagtccccaattaccttcgccaagaa
cgagaagaggagttccgccaaggtaaactcgccaccctgttctgttctcccacgatggaa
ctaggcatcgatatttctgacttgagcgtggtgcatctgcggaatgtcccgccctcacct
gccaactatgcccaacgcagcggtagagccggaagaagcggacaagaagcaatggtcatc
acctacgccgccgcaggaagcggacacgaccaatatttctatcgtcaccaagccgcaatg
gtcgccggagcggttgcgccacctaagttagaactcgccaatcaagatctgattaaatcc
cacatctactcagtctggctgggattagctggagtgcaatttggcgactcgatgaatcag
atcctggatctagaacaacccaaatacccactcaaggagaatctccgcacccagttagaa
cggatgggtcagcctatattccaccataattgcgttaacgccactcgatcgatcctcgcc
gatactttttgtcaaacagacctaaatcgcgtctcctggtacagtccagagtggttagag
cgaacgattggcaatgccctaaatgagtttgacaattcatgcgatcgctggcgcaagctc
tatgatgatgcagttacccagatgactgaagcacaaagagttctccagaaagtcaccgct
ggaaatgaagctaaagaggagaaaaatcgagcagatcgatcgttccaagaagccaagcac
caaatcgatctcctcgtcggacaaggtgcgggtaaaaacaatagccagtttgaattttat
ccctatcgctacttcgcctcccaaggatttctgcctggtttcaatttcccccgtctcccg
atttacacctatctccccactggcaaagatcgcggcgaatatatttctcgtccccgtcat
ttagccattcgagaaatggctccccaaaatatcctctactacgagggtaataaatttaaa
gtcgatcgcaccaaacgctatacccaaggcattgacagccgttatcaaacgctagttatt
tgcgatcgctgtggctattttcatcctaaattaatcgatgtctgtgaaaattgtggcaat
aaaccaactagcgatcgcagtggcaaacccgctgtcatcatgagagcattggaaatggat
acaatgttcgccagacggaaggagcgaatcacctgcgatgaggaagatcgcctcaaaaat
ggttatcagattagtacctgtttccagtttaccgatggacgaaaagaagtagctaccgtg
atcgccgctgacggcacaccattactccgacttacctatggcgaaactgccaatattatg
cgaatcaatcgcggtttgcgaagcgaaaaaggcaatggtttcagactcgatcccactagc
ggacaatgggaaccaccaactaataaaaccgacctacagacgaatattcaagccgatatt
catctcaccgtcaaagcgactaccaatctactctcgatcgaaccattagatctaccagaa
cacgagcgagagtcattcatcacaaccttccaatacgccttagagcgatcgattcaaaca
gtctacaagctcgaacaatcggaactagattccgaacgactggggcaaaatagcgatcgc
ctattattctgggaagccgctgaaggtggcgcaggagttctctcccaaatcctcgaagat
ccccaatccttccaaaaattagcagtatcagcatgggaaatctgccattttaaagaacat
aaagacaattgtgctcaagcttgttatgaatgcctgctctcctacggtaatcaatgggat
catcccctcttaaatcgccatacaattgagaatttcttgaatcgattgcgcgggagtaaa
ttagagcggcactcgatcggattatctcgcgaagagcaatatcaacaactattagcccaa
accgatcccaattctgagtttgaacgggtggtattaacagcgatgttcgatcgagggttg
aaattacccgatactgctcaaatgtatattcctgaagccaactgcaaaccagattttgtc
tataacaatggtgtcaaaattgcgattttctgcgacggttcggttcatgattcaccagaa
caaaaacgacaagataagatcgatcgggataatttgcagtatgtagtcggttactcggtg
ttatcgattcggcaaagccgacgcgatgcgatcggttatgaagaggagttagagttggga
ttgcaacatttggcagctctattggcgtaa
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