Cyclobacterium marinum: Cycma_1688
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Entry
Cycma_1688 CDS
T01592
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmr03009
]
Cycma_1688
Enzymes [BR:
cmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Cycma_1688
Ribosome biogenesis [BR:
cmr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cycma_1688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
GatB_N
Motif
Other DBs
NCBI-ProteinID:
AEL25442
UniProt:
G0IUQ0
LinkDB
All DBs
Position
1977472..1978506
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AA seq
344 aa
AA seq
DB search
MTEITNEELPEEESFFDHHELTVDPGQSSIRIDKFITDKLAYATRNKVQQSITSGIVQVN
GEVVKANYKIKAGDLITFAMEKSRKETEVVAEDLPLDIRYEDDHLMVVYKPAGMVVHPAH
GNWTGTLVNALAYYFKNLPELPGNSGRPGLVHRIDKDTSGLLVIAKSERAMTHLAKQFFD
HSISRSYVALVWGEPSDEEGTINVPIGRGVKDRKVMQAYLEGDAGKSAITHWKVIKRLRY
VTLLSCELETGRTHQIRAHMKYIGHPLFNDAMYGGDQIRKGTQYSKYKSYIQNCFQILPR
QALHAKSLGFIHPISGEELYFEGEIPEDMLTVIEKWENYVKFEK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatcaccaatgaagaattaccggaagaagaaagttttttcgatcaccatgaa
ttgactgtagatcccggacaaagttcgattagaatagataaatttattaccgataaattg
gcctacgctactagaaataaggtgcagcaaagcattacttcaggaatcgttcaagtaaat
ggagaagtagtaaaagccaattataagatcaaagcaggtgacctgattacctttgctatg
gaaaagagtcgcaaggaaactgaggtggtggcagaagatctccctttagacatcaggtat
gaagatgatcacctaatggtggtttataaacctgccggcatggtggtccatcctgcccat
ggcaattggaccggcaccttagtcaatgcattggcatattattttaaaaacctaccggaa
ttacccggaaattcaggacgtccaggtctggtacacagaatagacaaagacactagtggg
ctcttagttattgccaaatctgaaagggcaatgacccatcttgccaagcaattttttgat
cattccatttcaagaagctatgtggctttggtctggggggaaccatcagatgaggaagga
acgatcaatgttcccataggccggggagtcaaagatcgaaaagtaatgcaagcatacctg
gaaggtgatgccggaaagtcagccatcactcactggaaggtaatcaaaagactgcgatat
gttacgcttttaagctgcgagctagaaaccggaaggacacaccagattcgggcacatatg
aaatacatcggccacccactatttaatgatgccatgtatggaggggatcaaattcgaaaa
ggaacccaatattcaaaatacaaatcttacatacaaaactgttttcagatactcccccga
caggcattacatgccaaatcattgggttttattcacccgataagtggtgaagaattgtat
tttgaaggggaaataccggaggacatgttaacggtcatcgaaaagtgggaaaattacgta
aaatttgaaaaatag
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