Cyclobacterium marinum: Cycma_2078
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Entry
Cycma_2078 CDS
T01592
Name
(GenBank) NusB antitermination factor
KO
K03625
transcription antitermination protein NusB
Organism
cmr
Cyclobacterium marinum
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmr03021
]
Cycma_2078
03009 Ribosome biogenesis [BR:
cmr03009
]
Cycma_2078
Transcription machinery [BR:
cmr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Cycma_2078
Ribosome biogenesis [BR:
cmr03009
]
Prokaryotic type
rRNA transcription factors
Cycma_2078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusB
Oscp1
Motif
Other DBs
NCBI-ProteinID:
AEL25825
UniProt:
G0J176
LinkDB
All DBs
Position
complement(2421172..2422356)
Genome browser
AA seq
394 aa
AA seq
DB search
MLNRRILRVKAFQTLYAFQQCKHSNANLAQDFIKEAFLPDLNSMEVQDRGLLKKEASRCI
EVFTKNLDKVQLSLDKSDNEKVKETAVKAISFYNKSNKKDQEFLRTNMLTAVENIPALYL
FAISMLVGFGEHVRKEKVKKRKFEDQPIVQQDSAYNLGSNKVLGIIEQNHSFKKECLRFE
VDIEELELEIKEWYRELVKPHEDYQKYMAIENPSIEDDKEILLTILKKIIFKKEAILSFF
QDKDLNWTENKSIVRSLSSKVLKTITGTEEESDEILPDLALNWEEDKEFFQEIYNLTVAS
EKEYSELIATTTKNWDVERIALTDRVILIMALSEMVNFSSIPTKVSINEYIDISKTYSTP
KSKQFVNGLLDTLSKELTESGKIRKSGRGLIDNK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataggagaatcctcagagtaaaagcatttcaaacgttatatgcttttcaacag
tgcaagcattccaatgcaaatctggcacaagacttcatcaaagaagcttttttgccggat
cttaattctatggaagttcaagatagaggtttgcttaaaaaggaagcaagtcgatgcatt
gaagtttttaccaaaaatctagataaggttcaactatcattggacaaaagtgacaatgaa
aaggtaaaagaaacagcggtaaaggccattagcttttataataagagcaacaaaaaggat
caagagtttttaagaaccaatatgctgacagctgtagaaaatatacctgcactgtactta
ttcgccattagcatgttggttggttttggggaacatgtacggaaagagaaggtcaaaaag
agaaagtttgaagaccagccgattgttcaacaagattcagcatacaatcttggttccaat
aaagtcctgggaataatagagcaaaaccattccttcaaaaaggagtgtcttagatttgag
gtagacatcgaggaattggaattggagatcaaggaatggtacagagaactggtgaagcct
catgaagactatcagaaatacatggccatagaaaatccaagtatcgaagatgacaaagag
attttgctgaccattctcaaaaaaattatttttaaaaaagaagcaattttaagtttcttt
caggacaaggacttgaactggacagaaaataaatccattgtcagaagtttgtcttcaaaa
gtattgaagaccattacaggcactgaggaggagtccgatgaaattcttcctgatttggca
ttaaactgggaagaagataaagaattctttcaagaaatttataatctcactgtagcctcg
gaaaaggagtacagtgaattaattgccactacaaccaaaaattgggatgttgaacggatt
gccttaactgatagagtaatacttattatggctttatcagaaatggtgaatttctcaagt
atccctactaaggtatccataaatgagtacatagatatttctaaaacctacagtactcct
aaaagcaaacagtttgttaatgggcttttggatactttatcaaaagaattaaccgaaagc
ggaaaaatacgtaagagtggtagaggtcttatagataataaataa
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integrated database retrieval system
