Cordyceps militaris: CCM_00911
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Entry
CCM_00911 CDS
T03108
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
cmt
Cordyceps militaris
Pathway
cmt03420
Nucleotide excision repair
cmt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CCM_00911
09124 Replication and repair
03420 Nucleotide excision repair
CCM_00911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmt04121
]
CCM_00911
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_00911
Ubiquitin system [BR:
cmt04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
CCM_00911
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
CCM_00911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
Motif
Other DBs
NCBI-GeneID:
18162945
NCBI-ProteinID:
XP_006666133
UniProt:
G3J6X9
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MQTRLLARETGDLRAQDFARSVASDLIHTFAPAPQHRFNGDILTSQGLTRGNPPPVVEER
AHNIRAHGAGVSALDVDKFDGRLMISGGADGSIKIWDLESAPSPHTLHTFKPALAIARST
QDARSSSNRGHSHGVTHLAFYPFDSGAFLSSSFDKTLKLWSTPRAALSAEFPLNATIYSH
SMSPVADHLLVACATQHSNVRLVDLKSGAAVQALVAHGGPVLSTTWSPQHEHILASGHAD
GKVRIWDIRRAGGVVAQLDQEDSLGVVHRFTLAAANGADWTRHPHFRASAQAHDEAVNCI
KWTDDGRYIVTAGLDRKIRVWDADTGANTLASFGSLIQNQHPKTANMLLSPSGLCSTGDV
LVWANDQEMLLLNMHDGTIITRLRSPGLANPVGPRSAEIGRNRIATMAWRGAGGSGCRSL
GPVMGGAQSLGTIYSAHLDGHIRTWMMTIPDPDDVDDVEEVDQNLEVRIRKRKAVDDAYR
SLMGKNITFS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcgtctcctcgctcgtgaaacaggcgacctacgagcccaagacttcgctcgc
agcgtcgcgagcgacctcatccacacctttgcgcctgcgccacaacatcgcttcaatgga
gatattctaacctcgcaagggctgacgcgaggcaacccgccccctgttgtcgaagagaga
gcacataatatccgcgcgcacggcgccggtgtcagcgccctcgatgtcgacaagtttgac
ggacgcctcatgatatcaggcggcgccgacggctccatcaagatctgggacctggaaagc
gcgccgagccctcacacactacacactttcaagcccgcattggcaattgcgcgctcgaca
caagatgcgcgtagcagcagtaataggggtcatagtcacggcgtcacgcatctggcgttc
tatccattcgactctggcgcgttcttgtccagctcgttcgacaagacgttgaagttgtgg
tcaacgccgcgtgcggccttgtcagccgagttccctctgaatgccacgatttactcgcac
tcaatgagtcccgtggcggatcatttgctcgtggcatgcgctactcagcattccaatgtg
cgactggtcgacctgaaatctggtgccgccgtgcaagcgctcgtggcacatggagggccg
gttctcagcacaacctggagcccgcaacacgagcatatactcgccagtggccatgccgat
ggcaaagtgcgcatatgggacattcggcgtgcagggggcgtcgtcgctcagcttgaccag
gaagactcgcttggcgttgttcatcgattcacgctcgcagcggcgaatggtgccgactgg
actcgccacccgcacttccgcgcctcggcccaggcccacgatgaggcggtcaattgcatc
aagtggacagacgatggcagatacattgtcaccgccggcttggatcgcaaaattcgagtc
tgggacgctgacacaggcgcgaataccctcgccagctttggatcgcttatccaaaaccag
caccctaaaacagcaaacatgcttctgtcaccgtccggtctctgtagtacaggcgatgtc
ctcgtctgggctaacgatcaggagatgctgttgctgaacatgcatgacggtaccatcatc
acacgcctgcgtagccccggtttggcaaaccccgttggtccgcgcagcgctgagattggc
cgaaataggatcgcgaccatggcttggcgaggtgccggcggaagtggctgtcgttcactt
gggcctgtcatgggtggcgcgcagtcgctgggtacaatctacagtgctcacttggatggc
catatacgtacctggatgatgacgataccggaccctgacgatgttgacgatgttgaggag
gtggatcaaaatctcgaggtgcgcatacgtaaacgcaaggcagtagacgatgcatacaga
agcctcatggggaaaaatattaccttttcatga
DBGET
integrated database retrieval system
