Cronobacter muytjensii: AFK63_00865
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Entry
AFK63_00865 CDS
T04067
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFK63_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_00865
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK63_00865
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFK63_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ALB69232
LinkDB
All DBs
Position
complement(166529..169357)
Genome browser
AA seq
942 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVTLAAQTVSQMVDNVLALPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPVCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNTEL
SLAGGAIRGWDRRNFYYFQMLRSLADHYKFDVEAPWNTLSDKVQKAVLFGSGKETIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESNAVREELAKFISNRPCATCEGTRLRREARH
VFVENTALPTISDMSIGHAMEFFNNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGPLDAIMAVPESLTGQFMSGKRKIEV
PKERVKADPEKVLKLTGARGNNLKDVTLTLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGMEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLQVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECKESHTARFLKPLLNQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggataagatagaagttcggggcgcccgcacccacaatctcaaaaatatcaacctcgtc
attccgcgcgacaaactcatcgtcgtgaccgggctgtcgggttccggcaagtcttcgctg
gctttcgacacgctctacgccgaagggcagcgccgttatgtcgagtcgctttccgcgtac
gcgcgtcagttcctgtcgctgatggaaaagccggacgtcgaccatattgaagggctgtcg
cccgcgatttccatcgagcagaagtcgacctcccataacccgcgttctactgtgggtacc
attactgaaattcacgattacctgcgcctgctgtatgcccgcgtcggcgagccgcgttgc
ccggatcacgacgtgacgctggccgcccagaccgtcagtcagatggtggataacgtactc
gcgttgccggaaggcaagcgtctgatgttgctggcgccggtcatcaaagaacgtaaaggc
gagcacaccaaaacgctggaaaacctggcaagccaggggtatatccgcgcccgtattgat
ggcgaggtgtgcgatctttccgatccgccgaagcttgaattgcagaaaaaacacaccatc
gaagtggtggtggaccgctttaaggtgcgtgaggatttagcccagcgcctggcggagtca
tttgaaaccgcgctggagctttccggcggcacggcggtcgtggcggatatggacgatgaa
aaagcggaagagctgctgttctccgccaacttcgcctgcccggtgtgcggctacagcatg
cgcgagcttgagccgcgcctgttctcgtttaacaacccggctggcgcgtgtccgacctgc
gacgggctcggcgtgcagcaatatttcgatccggatcgcgtggtgcagaacaccgagctg
tcgcttgcgggcggcgctatccgcggctgggatcgccgtaacttctactatttccagatg
ctgcgctcgctcgccgaccactataaattcgacgtggaagcgccgtggaacacgctcagc
gataaagtacagaaagcggtgctgttcggctccggtaaagagacgatcgaatttaaatat
atgaacgatcgcggcgatacgtctgtgcgtcgtcatccgttcgaaggcgtgctgcataat
atggagcgccgctataaagagaccgaatccaacgcggtgcgcgaagagctggcgaaattt
atcagcaaccgtccgtgcgcgacttgtgaaggtacgcgtctgcgtcgcgaagcgcgccac
gtatttgtagaaaataccgcgctgccgaccatttccgacatgagcatcggtcatgcgatg
gagttcttcaacaacatgaagctctccggccagcgcgccaaaatcgcggaaaaagtgctg
aaagagattggcgatcgcctgaaattcctggtgaacgtcggcctgaactatctgacgctt
tcccgctcagcggaaacgctctccggcggcgaagcgcagcgtattcgtctggcaagccag
attggcgccggtctggtgggcgtgatgtacgtgctggatgagccatctatcggcctgcac
cagcgcgataacgaacgtttgctcggcacgcttatccatctgcgtaacctcggcaatacc
gtgattgtggtagagcacgatgaagacgccattcgcgccgccgatcatgtgatagacatc
ggccctggcgctggcgtacacggcggccaggtcgtggcggaaggcccgcttgacgcgatc
atggcggtgccggaatcactgaccgggcaattcatgagcggtaaacgcaaaattgaagtg
ccgaaagaacgcgtgaaggcggacccggaaaaagtgctgaaactcaccggcgcgcgcggc
aacaacctgaaagacgtcacgctgacgctgccggttggtctgtttacctgcgtaaccggc
gtttccggttccggcaaatcgacgctgattaacgatacgctgttcccgatagcccagcgc
cagctcaacggcgcgactatcgccgagcctgcgccctatcgcgacattcaggggatggag
catttcgataaggtcattgatattgaccagagcccgattggccgcacgccgcgctcgaac
cctgcaacgtatacgggcgtctttacgccggtgcgcgagctgttcgctggcgtaccggaa
tcgcgctcgcgtggctatacgccgggccgcttcagctttaacgtccgcggcggacgttgc
gaagcatgtcagggcgacggcgttatcaaggtggagatgcacttcctgccggatatctac
gtgccgtgcgaccagtgtaaaggcaagcgctacaaccgcgaaacgctggaaattaagtac
aaaggtaagactatccacgaagtgctggacatgactatcgaagaggcgcgtgagttcttc
gacgcggtgccggcgctggcgcgtaagctgcaaacgctaatggatgtgggcctgacttac
attcgtctcggccagtctgcgacaacgctctccggcggtgaagcccagcgcgtgaagctc
gcccgcgagctctcaaaacgcgggaccggccagacgctttacattcttgatgagccgacc
accggtctgcacttcgcggatattcagcaactgctgcaagtgctccatcagctcagggat
cagggcaacacgatcgtggtgattgagcataacctggatgtcatcaaaacggccgactgg
attgtcgatcttggcccggaaggcggcagcggcggcggtgagatcctcgtctccggcacg
ccggaaaccgtggcggagtgcaaagagtcgcataccgcacgcttccttaagcccctgtta
aatcagtaa
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