Chelonia mydas (green sea turtle): 102934423
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Entry
102934423 CDS
T02989
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102934423 (DICER1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102934423 (DICER1)
microRNA pathway
RISC loading complex
102934423 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
SLFN-g3_helicase
Amidoligase_2
Motif
Other DBs
NCBI-GeneID:
102934423
NCBI-ProteinID:
XP_037756814
LinkDB
All DBs
Position
6:complement(105568728..105671468)
Genome browser
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLAKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSILEIIESWTKEKWNQEFAKHEVLVMTCHVILNVLKNEYLSLSNINLLVFDECHLA
IQDHPYQEIMKICENCPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYERLLKELDEALNFLNDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETE
TESIVDDDDIFPPYVLRPDDSSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
TTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPQPDHPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL
QMLELITRLHQYIFSHILRLEKPALEFRPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTKYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPSSTLAENENYCKHSTIVVPENAAHQGATR
ASSAENHDQMSVNYITLLNESPSKLQIDVSVELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQEIPVQPTTSYPIQNLYNSENQPKPSNECTLLSNKYRDGNVNRSTSDGSPKMA
VTTSTSEALNFSKDRMDSEKNCSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNADKWEKDEMTKESLLANGKLDDDYDEEEDEDLMWRLPKEEADLEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSSYEWKAPKKSSLGSIQFSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKKTEWNRTSCSSRENFSSQQKNLSPNC
ASASVANSECSLCKEMEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYNFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcaggactgcagcttatgacccctgct
tcctcaccaatgggtcctttttttggactgccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataatacg
atagtctgtttaaacactggctcagggaagacttttattgcagtactacttgctaaagag
ctgtcctatcagatcaggggagacttcaacaaaaatggaaagagaacagttttcttggtc
aactcagcaaatcaagttgctcagcaagtgtcagctgtcaggacccattcagatctgaag
gtgggggagtattcaattttagaaataattgaatcatggacaaaggagaagtggaatcaa
gaatttgctaaacatgaggttctggttatgacatgtcacgtcattttgaatgttttaaaa
aatgaatacttatccctgtcaaacattaatcttctggtgtttgatgagtgccatcttgca
atccaggaccatccgtatcaagaaattatgaagatctgtgagaactgtccatcctgtcct
cgaatcctgggattaacagcttccattttaaatgggaaatgcgatcctgctgagttagag
gagaagattcagaaactggagaaaatcctaaagagcaatgctgaaactgcaactgatttg
gtggtcttagatagatatacttctcagccatgtgagattgtggtagattgtggaccatat
accgacaaaagcgggctgtatgaaagattgttaaaagaattggatgaagcacttaacttt
ctaaatgactgcaacatatctgtacattcaaaagaaagagactctacgttaatttctaaa
cagatactgtcagactgtcgagctgtgttggttgttctgggaccctggtgtgcagataag
gtagctggaatgatggtgagagagctacagaagtacatcaaacatgagcaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactgtgtgaa
gagcacttctcacctgcctcacttgatctgaaatttgtaaccccgaaagtaataaaactg
cttgaaatcttgcgcaaatataaaccatatgagcggcagcagtttgaaagtgttgagtgg
tataataataggaatcaggataattatgtgtcttggagtgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccagagacaaatttcccttctccctttactaat
attttatgtggaattatttttgtggaaaggagatacacagcagtcgtcctaaacaggttg
ataaaggaagctggaaaacaggatccagaactggcttacatcagtagcaattttataact
ggacatggcattggaaagaatcagcctcgtaacaaacagatggaagtggaattcagaaaa
caagaagaggtacttagaaaatttcgagcacatgagaccaacttacttattgctactagt
attgttgaagagggtgttgacataccaaaatgcaatttggtggttcgttttgatttgccc
acagaataccgttcctatgtgcagtccaaaggaagagccagggcaccaatctcaaattac
atcatgttagcagacacagacaaaatcaaaagttttgaagaagatcttaaaacctacaaa
gcaattgagaagatcctcagaaacaaatgctcaaagtccgttgatactagtgaaactgaa
actgaatccatcgtggatgatgatgatatctttccaccctatgtgttgaggccagatgat
agcagtccaagagttacaattaacactgcgattggacacatcaataggtactgcgcaaga
ttgccaagcgatccatttactcatctggctcctaagtgtaaaacccgagaactgcctgat
actacattttattcaactctctacctgccaatcaactcacctcttcgagcctctattgtt
ggtcctccaatgagttgtgcaagactggctgagagagtggtagctcttatttgctgtgaa
aaacttcacaaaattggtgaactggatgaccacttgatgccggttggaaaagaaacggtt
aagtatgaggaggagcttgatctacatgatgaagaagaaaccagtgttccaggaagacca
ggatctacaaaacgaaggcagtgctaccctaaagctattccagaatgtttgagagatagt
tacccccaacctgatcatccctgttatctgtatgtaataggaatggtgttaactacccct
ttgcctgacgagctcaactttaggaggcgaaagctgtatcctccagaggatacaacaaga
tgctttggaatactgacagccaaacctatacctcagattcctcactttcctgtgtacaca
cgttctggagaggttactatatctattgagctaaagaagtctggttttatgttgtcttta
caaatgcttgagctgatcacaagacttcaccagtacattttctctcacattcttcggctt
gagaaacctgcactagagttcagacctacagaagctgattcagcctattgtgttctacct
cttaatgttgttgatgactccagcactttggacattgactttaagtttatggaagatatt
gaaaaatctgaagcacgtacaggcattcccagtacaaagtacacaaaagaaactccattt
attttcaaattagaagattaccaggatgcagttatcattccaaggtatcgaaattttgat
cagcctcatcgattctatgtagctgatgtatacactgatcttactccactgagtaaattt
ccttcccctgaatatgaaacttttgctgaatattataaaacaaagtataatcttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgccatttgaatcagaaggggaaagctcttccactaagcagtgctgagaagagg
aaagctaagtgggaaagtctgcaaaataagcagatattggttccggagctctgtgctata
catcctattccagcatcgctgtggagaaaagcagtttgtctccctagcatactttatcgt
ctgcactgcctgttgacagctgaggaactgagagcccaaacagccactgatgctggtgta
ggggttaaatcacttcctgcagacttcagatatcctaacctggacttcgggtggaaaaag
tccattgacagcaaatccttcatctctattcctagctccactttagcagagaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctacaaga
gcctcctctgcagaaaatcatgaccaaatgtctgtgaactacataacattgctcaatgag
tcacccagtaaactccaaattgatgtatcggtagaacttgcagcaattaatggtgtttct
tataataaaaatcttgccaatggcaattgtgatttagttaacagagacttttgccaagga
aatcaactgaattactgcaggcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaacagtgagaaccagcccaagcccagcaatgaatgtactctactgagt
aataaataccgtgatggaaatgttaacagatctacctcagatggaagccccaaaatggca
gtgaccaccagtacttcagaagctcttaatttttcaaaagacagaatggattctgaaaag
aactgttcaagtggatactcctcaaaaactcttggcccaaaccctggtctcattcttcag
gctttgacgctttcaaatgctagtgatggatttaatctagagcggctcgaaatgcttggt
gattcatttttaaagcatgccatcactacatatttgttttgcacttacccagatgctcat
gagggacgcctgtcatatatgagaagtaaaaaagtcagcaattgtaacttgtatcgtctt
gggaagaagaaagggctgcctagtcgtatggtggtatctatttttgatccacctgtcaat
tggctccctcctggttacatagtaaaccaagacaagagtaacgcagacaaatgggagaaa
gatgaaatgacaaaagaaagcttgttagctaatggtaaacttgatgatgattatgatgag
gaggaggatgaagacctaatgtggaggttacccaaggaagaagctgaccttgaagatgat
tttttggaatatgatcaggaacatatcaaattcattgataatatgttaatgggatctggg
gcttttgtgaagaaaatttctctctcacccttttcaaccactgattccagctatgaatgg
aaagcacccaaaaaatcatccctgggtagcattcaattttcttcagattttgatgatttt
gactacagttcttgggatgctatgtgctatctggatcctagcaaggctgtcgaagaagat
gattttgtagtaggcttctggaatccgtcagaagaaaactgtggtgttgacacagggaaa
cagtcaatctcgtatgacttgcatacggagcagtgtattgccgacaaaagcattgcagat
tgtgtggaagccttgctgggttgctatctgaccagctgtggtgaaagagctgctcagctt
ttcctgtgttcattagggctgaaggtgctcccagtaatgaaaaaaactgagtggaacagg
acttcgtgttctagcagggagaattttagcagtcaacagaaaaatctttcaccaaactgt
gcttctgcctctgtagccaattcagagtgttctctgtgtaaagaaatggagtatggctgt
ttgaagattccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctgaatcac
ctgatatctggttttgaaaattttgagaagaaaattaactacaattttaagaataaggct
tatcttcttcaggcatttactcatgcctcctaccattacaataccattactgattgttac
cagcgcttggaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcagcactctccaggagttctaactgacctacgatccgctctagtcaat
aataccatctttgcatcattagctgtaaagtatgactaccacaagtacttcaaagctgtc
tctcctgagctgttccatgttattgatgactttgtacagtttcagatggaaaagaatgaa
atgcaaggaatggattctgagctcagaagatctgaagaggatgaagagaaggaagaagat
attgaagtaccaaaggccatgggagatatatttgagtcattggctggtgccatttatatg
gatagtgggatgtctttggaaatggtttggcatgtgtactatcctatgatgaggccatta
atagaaaagttttctgcaaatgtgcctcgttccccagtgcgggagctgctggagatggaa
ccagagacagccaaatttagtcctgcagaaagaacttacgatggaaaggtcagagtaact
gtggaagttgtagggaaaggaaagtttaaaggtgttggcagaagctataggattgccaaa
tctgcagctgcaagaagagcactacgaagcctcaaagcaaaccaacctcaggtcccaaac
agctga
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integrated database retrieval system
