KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBK2570Help
Entry
CNBK2570          CDS       T01040                                 

Definition
(RefSeq) hypothetical protein
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cnb00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    CNBK2570
Enzymes [BR:cnb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CNBK2570
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CNBK2570
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
11
AA seq 1079 aa AA seqDB search
MAVHAPYNHAPPPTQEINGQKPTLAPAITLERPADCINRGQYPAFYIICGYLNRLRADAP
HKKYELLTRIFGNWREKVGPDLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKH
SEAAQRLIKWKQPAGNSPNPTGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKM
KQKDYVPILKAINMQCTAEEQEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNVCSDLK
RVCWTLYDPGFRLNKNETHLELFHSFLPQLCGRMNDASLENIAKAIGAPKEFIMEEKLDG
ERIQLHMRGNGAQWFYCSRKAKDYTYLYGAHPGEGSLTHYIATAFQDNVRNVILDGEMMV
WDPVVERYLAFGTLKSAALDHFNDETAPRPCFKVFDILFLNDHCLSRKRLSERKRLLRSG
KIFKNIESYKGRLEFVDEKRGKNAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDW
IKVKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTVERPSFKTFCS
IGSGMSYSDYEWILNKHKKHWKPFDRSNPPPFMKLGPVGLDDKPDVYIEPENSFVIEVKA
SEIVPAGGYGIGFTLRFPRCKYIYYDKNSRDYALDDESKERDMWTSMSVDDFMDLFSRPK
RSYDDSQGPGKRKKRKVIRSKKNHLISNFRGQKLSDADVETSIFSDMTFYIVKGTSDYPK
ADLEALVHKHGADFTQAQLSDLSAIVISPDQKNPLVRAQIRHGVNVIKPEWVFESIARRT
ALPFLKEFLVFASEEAQDGRYYNKTLEQYDKVSFVRDRTGGALVDEDGDADVEDEIMDGE
DKDEIDVEESRESKNRRMAREDLKEKESNRTLQQKKLQEAWGLRSRASPGDSDSEPEEEM
SLKEESDTDSERSRGLRAIYEDEEDGENDSHESDVGVNGDDYRAVPLSGLNDKEEGLMGE
SPEAMHYDEDRIFYHLAFYIDTAKNAAVNGLESSSPSFDTEERLVKVEKLLIENGGRVAR
SISDPKLTHIIMDDEDSRRYVELTRKTAMPKRKHIVTPKWVEDCVDEETLLDEDLYKPK
NT seq 3240 nt NT seq  +upstreamnt  +downstreamnt
atggcagtacacgctccatacaatcatgcacctccgcccactcaagaaataaatggtcag
aaaccgacattagcccccgcgataactctcgaacgtccagcggactgtatcaaccgcggc
cagtatcccgctttctacattatctgcggctatcttaacagactacgggcagatgcgccg
cacaaaaagtacgagcttctgacgaggatattcgggaactggagggagaaagtagggcca
gatctttatccgttgatcaggttgttgttacctgataaagatagggaaagacccgtgtat
aatttgaaagagtcaatgttggctcgatgctacattgatatattgtcgttagagaagcac
agcgaggcggctcagaggttgatcaaatggaagcagccggcaggaaattcaccaaatcca
actggagactttgcgaaagtctgttacaatgagataaaagctcgatccaccgtggaggaa
gggcaattgagtgttgaagcagtaaacatgctcctcgataagctggctgttggaaaaatg
aagcaaaaagattacgtgccgatactcaaggcaatcaatatgcaatgtacagctgaggaa
caagaatggattatccggattatactcaaagacctgcatatctcaatacgtgaacgaggg
gtcttatcagcgtttcatccggatgcgatagatctgtataatgtttgttcagacctgaag
cgtgtctgttggaccttgtatgatcccggcttcaggctcaataaaaatgaaacgcatctt
gaattgttccactcctttctccctcaattatgtggccgcatgaatgatgcgtcgctcgaa
aatattgcgaaggctataggcgcgccaaaagagttcatcatggaagaaaagttggacggg
gagagaatacagttacacatgagaggaaatggtgcacaatggttctactgttcaaggaaa
gctaaagactacacgtatctgtatggcgcccacccaggagagggaagtttgacgcactac
atagctactgcgttccaggacaatgtcagaaatgtcattcttgacggagagatgatggtt
tgggatcctgtagtggaacgttacctggcttttgggactctcaagtcagctgcacttgac
catttcaatgatgaaaccgcccctcgtccatgtttcaaggtgtttgacatccttttcttg
aacgatcattgcctttcccgcaaacgtttatcagaacgcaagcgtctccttcgctctgga
aaaatcttcaagaatattgagagctacaaggggagattggaatttgtagacgagaaaaga
gggaagaatgcaaaggatattagagagtatttggaaagagtggtcgagaccaaaggcgaa
ggtttagtggttaagaagacggatgtgatttatcagacaaactcgagaggatatgactgg
atcaaggtcaagcccgagtatagtgaccaaatgggtgagaatttagaagtcttggtgttg
ggtggatggtggggtaaaggaggacgttcagggaagatttcaagattactctgcgggtta
agggaacaggcgtttgacgatggtacagtggaaagaccaagcttcaagactttctgttca
atcggttctggaatgagctactcggactacgagtggattttgaataaacacaagaagcat
tggaaaccttttgataggtccaacccaccccctttcatgaagcttgggccagtgggtctc
gatgacaagccggatgtttatatcgagccggagaactctttcgtcatcgaagtaaaggcg
tctgaaatcgtgccggcaggaggctatggaataggatttactcttcgttttccacgctgt
aaatacatttactacgacaagaatagtcgagactatgcgctcgatgatgagtcgaaagag
agggatatgtggactagtatgtctgtggacgacttcatggacctcttctcaaggcccaag
aggtcgtatgacgatagtcaaggtcctgggaaaaggaagaagcgcaaggtgatcaggtct
aaaaaaaaccacctcatcagcaacttccgaggtcagaagctttcagatgcagatgtggaa
acgagcatattcagcgatatgacgttttatattgtgaagggcacatccgactaccctaaa
gctgatctcgaagcacttgtgcataagcatggtgcagatttcacgcaagcgcagctgtcc
gacctatcggcgattgttatctctcccgatcaaaagaaccctttagtacgagcccagatc
agacacggagtcaatgtcatcaaacctgagtgggtatttgagagtattgcgcggaggaca
gcattgcctttcttaaaggaattcctggtcttcgcgtcggaagaagctcaagatgggcga
tattacaataagacacttgagcaatacgataaggtttcttttgtgcgcgatcgtaccggc
ggggcactcgtcgatgaagatggtgatgccgatgtcgaagatgagatcatggatggtgag
gacaaagatgagattgacgtggaagaaagtcgagaatccaagaaccgaaggatggccaga
gaagatctcaaagagaaagaatcgaatagaacgctgcagcagaagaagcttcaggaagca
tggggtttgagatcacgagcgagtccaggagattccgatagtgaacctgaagaggagatg
tcgctgaaggaagagagtgacacggattcggaaagaagtagggggctccgggcgatttat
gaagatgaagaggacggagaaaacgacagtcatgaatcagatgttggggtaaacggagat
gattacagagcggttcccctcagcgggttgaatgacaaggaggaaggacttatgggagag
agtccagaagcaatgcactatgatgaagatcgaattttctatcaccttgcattttacatc
gatactgcaaagaacgctgcggttaacggcttggaaagctcgtctccctctttcgacacc
gaagaaagactcgtcaaagtcgagaagctgctgatagagaatggtggacgtgtggcgaga
agcatctccgatcccaagctcacgcacattataatggatgatgaggattcgagaagatac
gtcgagttgacgaggaagactgccatgcccaaaaggaaacacattgtgacccccaaatgg
gtggaggattgcgtggatgaagagacattgctggacgaagatctgtacaagcccaagtaa

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