Entry |
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Name |
(RefSeq) structural constituent of nuclear pore, putative
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KO |
K14310 | nuclear pore complex protein Nup205 |
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Organism |
cne Cryptococcus neoformans var. neoformans JEC21
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNE00190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cne03019]
CNE00190
03036 Chromosome and associated proteins [BR:cne03036]
CNE00190
Messenger RNA biogenesis [BR:cne03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNE00190
Chromosome and associated proteins [BR:cne03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNE00190
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5:complement(join(38828..38965,39018..39256,39312..39399,39447..39583,39637..39777,39836..39941,39998..40147,40212..40489,40541..44375,44433..44489,44550..45217,45292..45490))
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AA seq |
2011 aa
MSTLPIQQWDPDQFSDLQHILARVLTQPTTSSLRKLYATLEQARPWLLNLTALPGVNDKD
KQFVEKNPIELANGTSINVTGDLLNATNALSSFLSLSHLFSSILSLQAETHRAVYPSRST
PEISIYLLHRWQTDLLDFLKELLKVVLEQGDMMGSGWEGLKEFVEDLLGAKVTLADGGGK
EGTLVDQILSQLSILQTKISSLLSTSSSGQGYELQQFRLTALRAEQNKLAGILALIAEGG
RLGRGQVIRVLKWLAKVERMDAVVGLVAASVWAAWKPLEVLDASDARYDVAEDWCHDIKF
LKLASSLALQERWAIPRLRESIKLSWSLFYLSCIKHDPSVIQTGIDQHEMEGWLLDSIAN
GAFQFLHELVISIRQERGWDEPDEVKEAGTDSLVKVALASDKGNDEFLFRQLQDLVDILA
GKKQFLRNLRNREEDALIRRSSIALSHINPNADANVYNYQTFLRLFASIYRSLPPDSALD
LWGNPTFTGTILDTRGGFPGPAFWEMLSSISSGPSCAAISYERLKDTRLPWTALFKFYQH
YIDIMPHAYEPIKTTRNPPPSLDPMPMEEVEICKGWTEVLSTVVKWSPAARGALLQMKPH
PLGVLWDFVNCENVPLHLKAAILNAITAFTSRPSQSQSEGSITTHDPMDDEVLVQSVGFY
EKISYRDPNADVRYLEGGRIPAPVGWLIRMGFLEGEAGRYELSRAYVNFLTALLPSPSSS
SSSSTSGTVSISSTLGKPTLSSTRPRLSNTLRRGTFQVIDGILLSLKMRRYTRDSERWEV
LDGLTAFLERAVLGFDMSELLNLGSGSGSSSSASSVGGTGGSGRGIGQIALELSEEPGFI
VILRLLSERDIFAVLAEVLDSAASLGGNRERKKIVSKVLRQVLRIYHRVMELQLVFADVL
LLALTDPSRNPVHTLKRPYGLQPLDNHLLAHLTNVNNIALLIGDDDPMISYLSTKLIALL
SNSPVFNRSDLFQGEYKGEVNRLAGVLDVSDDSIRILQGFVRRLDVESEDPEQGVEAVEE
IALHGDIEQVKEELPMVIRSVILDILIDGTSSSNTSPNIAHFLLGYDFRHRQFSFSSEEG
CLQVVLKQMLEGAGLAGSTGEGDGILEIHPQLGAKSAELVYQLFSGVLTGRATLAYAMSV
TGYSARQLASLPRQCPEWQGLVPQGSSLSAPSISTTGLGWAVTRDTKVETSSETLVAYLE
FQRWIISSASLEIFTYDGHGASASRIAQILFNGQTQALSDSGDVGDGEGENRLPPLLIDL
LNSVDVQWVEEPIDNRQLEFYASFDFDAYKRPDVDWWDIKGLGAGLTAFKKQLEGQGAIT
QASIPGVDAEAEYVLRRLGGKNRETDVAIAKGNFLAAWNELLKVGLTLLFARHITEDHQE
AILFDLLEGLLARLDGEIDLAPGVEDLLCESSLVVMTTLVGVLQKFEGVNLPVEQLGAVL
AKVVDAATRPGSTETARGNLYAAITQYLQLIIPANSNIPDDRSISGSTVDPLASFSSTTM
LQRITLQIFAAKKERLVPGLCRDAMDDRDVWKTQCFALLGGVVSICQGERDRHVVAPLIS
NGYLPLFVRSVKEREGALMECLAPDAENLHAYWVFEAKIAFLIALASTRKGSEDLLDAGI
FEIFATCGFINIQLNEGMLDEYAGGEIVERQHRVLVASLQLLTRVLSSLHKSARSGAGHA
ISFLNAHREAILALVREPQRNLTVTALDECRLVVSILAMVVHKVSPEDLYSPSSFGAFHL
AVLSAAAHAFDKNTWVEIAEENSKIESQMVLLNQVLLAFLTAATNGLKAGSGNPVFITGV
QRSHGSAVKYIASAPSLQMAVNLLSDLAETTEEVSNQYEVILDRMQDGSDLEEEDVEKLR
NEFIGDAPLSDDLIKVAFIARSQMLFNMIESLLLLIWRHLLFYANDVRGSLAPIRPENLS
PSLSSFAMSQQAQMEASRSNAGTMKMLERVAAGLRGTLIRLDDMEVNLELRRLATGGGAR
GDAYSGMLVRRLKEIVGGLVGEREIMEEDQQ |
NT seq |
6036 nt +upstreamnt +downstreamnt
atgtccaccctacccatacaacagtgggatccagaccagttctcggatctgcaacatata
ctcgcccgcgtactcacacagcctaccacttcctccttgcgaaaactgtacgcaactctt
gagcaggcgagaccatggttgttgaacctcactgctttgccgggcgttaatgacaaggat
aagcagtttgttgagaaaaacccaatagagcttgccaacgggacgtcaataaacgtcacc
ggcgacctcctcaacgcaacaaacgccctctcatccttcctctctctttcgcacctcttc
tcctccatcctctctcttcaagcagaaacacaccgcgccgtctatccttcacgctccacc
ccggagatttcgatctacttgttacatagatggcagaccgatttactcgattttttaaag
gaactgttgaaggtagtgttggagcagggggatatgatggggagtgggtgggaggggttg
aaggaatttgtggaagatttgttgggagcgaaagtgacccttgcagatggcggtgggaaa
gaggggaccttggtagaccagatactcagccaactatctattcttcagacgaaaatctct
tccctcctgtccacttcgtcttcgggacagggatatgaactccaacaattccggcttaca
gctctccgagctgagcagaataagttggcagggatacttgcgttgattgcggaaggaggc
agattggggaggggccaggttataagggttttgaaatggttggccaaggtggaaaggatg
gatgctgtggtgggtttggtggcagcgagcgtttgggcggcgtggaagcccctggaagtg
ctggatgcgtcggacgcgaggtatgatgttgccgaggattggtgtcacgatatcaagttc
ctcaagcttgcctcgagtcttgcccttcaagaacggtgggcgatccctcgtcttcgagaa
tccatcaaactctcctggtcccttttctatctatcctgcatcaaacacgaccccagcgtc
atccagacaggtattgatcaacatgaaatggaaggatggttgcttgactctatcgccaac
ggcgcattccagttcctgcacgagctagtcatctccattcgccaagaaaggggctgggat
gagcctgacgaggtgaaggaggctggcacggattcgcttgtcaaggttgcacttgcgtcg
gataaagggaatgacgagtttttgtttaggcagttgcaggatttagttgatatcctcgcc
gggaagaagcagtttttgcggaatctacggaatagggaggaagacgctttgattcgacga
tcgtctattgctctttcgcacataaaccctaatgccgacgccaacgtttataattaccaa
acttttctccgcctctttgcttcaatctaccgctccctccctcctgattctgctctcgat
ttgtggggaaatccgacgttcaccggcacaattctcgatactcgtggtggtttccccggt
ccagccttttgggaaatgttatcctcaatttcctctggtccttcctgcgctgccataagc
tatgaaaggctcaaagacacccgtctcccttggacagctttattcaagttttatcaacat
tacatcgacatcatgccccacgcttatgaacctatcaaaacaacacgtaaccccccgcca
tcgctagaccctatgcctatggaagaggtggagatatgtaaaggttggacggaagtgttg
agcacggtggtgaaatggtcgcccgcagcgaggggtgcgttattgcagatgaaaccgcac
ccacttggtgtgctctgggatttcgtgaattgcgagaatgtgccactccatttgaaggcg
gccatactcaatgctatcactgctttcacttctcgcccttctcaatctcagtcggaaggc
tccattaccacccacgatccaatggacgacgaagtccttgtgcagtcagtagggttttac
gaaaagatatcataccgcgatccgaatgcagatgtgaggtatctggaaggaggaaggata
ccagctccggtggggtggttgattaggatgggattcttggagggggaagcggggaggtac
gagctgagtcgtgcttacgtcaattttctcactgcacttttaccttctccctcttcctca
tcgtcatcctctacatcgggaaccgtctcaatctcatccacattagggaaacctactcta
tcgtctactcgtcccaggttgagcaacactctgagacgcgggactttccaagtcatcgat
gggatattactttcactcaagatgaggaggtatacgagggattcagagagatgggaggtc
ctagatgggttgacagcatttttggaaagggcggtcctagggttcgatatgagtgagctt
ctaaacctaggctctgggtctggttccagctctagcgcgagttctgttggaggaacagga
ggatcaggtaggggaatcggacagatcgccctggaattgagtgaagaacccggctttatc
gtcatcctccgtctgctaagcgaacgtgatatctttgccgtcctcgcagaggttttggac
agtgccgcttctttgggcgggaacagagagaggaagaagattgtgagcaaggttttgagg
caggtattgaggatctaccaccgtgtgatggaactccaattggtctttgccgacgtactc
ctactcgctcttaccgacccttctcgaaacccagtacatactctgaaacgaccgtacggc
cttcagccgctggataaccatctcctcgcacatttgacaaacgtgaacaatatcgctttg
ttgataggcgatgatgacccaatgatctcgtacctttccaccaaacttatcgcgttgctc
tccaattctccagtgttcaatcgatcagacttgttccaaggggagtacaagggtgaggtg
aatcggttggcgggggtgttggacgtttcggatgattcaatccggatattgcaaggattt
gtgaggaggttagatgtggaaagtgaggatccggaacaaggtgtggaggcagtagaggag
atagcgttgcatggggatatcgagcaggtcaaggaagaattacccatggtcattcgttcg
gttatcctcgacatcctgatcgatggtacatcgtcatccaacacctcacctaacattgct
catttccttctcggatacgatttccgtcatcgccaattctcattctcctctgaagagggg
tgtcttcaggttgttttgaagcaaatgcttgaaggtgccggattggccggatcgacgggt
gaaggtgatgggattttggagatacatcctcagttgggagcgaagagtgctgaactagtg
tatcagctcttctcgggagtgttgactggaagagcgacgttggcgtacgcaatgtccgtc
acgggctattcggcaaggcaactcgcctctttgccccgccagtgtcctgaatggcaaggc
ctcgttccccagggcagttccctttcggccccctccatttccacaacaggattgggatgg
gctgtgacaagggatacaaaggtagaaaccagctctgagaccttggtggcctaccttgaa
ttccaacgatggatcatctcaagtgcctctctggagatttttacctatgacggccatggc
gcatcggcttctcgtatcgcccagatccttttcaacggccaaacacaagccctttccgat
agtggcgacgtaggcgatggtgaaggggaaaaccggctccctccgcttttgatcgacctc
ctcaactctgttgatgtacaatgggtcgaagaacctatcgataaccgccagcttgaattc
tatgcgtcatttgatttcgatgcttacaaacgaccggatgtggattggtgggatattaag
ggcctcggagctggtttgacggcgttcaagaaacagctcgaggggcagggagcgatcact
caggcgtcgatcccaggtgtagatgccgaggcagaatacgtgcttaggcgtttgggagga
aagaacagggaaaccgacgtagcgattgcaaagggcaacttccttgccgcttggaacgaa
ttgctcaaggtgggattaaccttgctcttcgctaggcacatcacagaagatcaccaagaa
gctattctcttcgaccttcttgaaggtttacttgctcgacttgacggagagattgacctt
gctcccggtgtggaggatctgttatgtgaatcgagcttggtggtgatgacaacattggtc
ggcgtgctccagaagtttgaaggagtcaatcttccagtagaacagctcggagcggttttg
gcaaaggttgtagatgctgctacgaggccgggatcgacagaaactgcaaggggaaacttg
tatgccgcgatcacacaatacctccagctcatcatcccagccaactctaacatccctgat
gatcgatccatttccggttcaacagttgaccctctcgcttccttttccagtactaccatg
cttcagcgcataacgcttcaaatatttgcggccaagaaggagagactcgtacccgggctt
tgtagagacgccatggatgatcgggatgtgtggaagacgcaatgctttgcgttattgggt
ggtgtcgtcagcatttgccagggagagagggataggcacgttgtggcgccgttaattagc
aatgggtacctgcccttgtttgtgaggagtgttaaggaaagggaaggggcattgatggaa
tgtcttgcacctgatgctgaaaacctccacgcttactgggtgtttgaggccaagatcgcc
tttctaatcgctctcgcatccactcgcaagggttccgaagacctcctcgacgccggcatc
ttcgagatctttgccacatgcggcttcatcaatatccagctgaacgagggcatgctggat
gagtacgctgggggagagattgtcgagaggcagcatcgagtactggtggccagtctacaa
ttgctcacccgagtgctgtcgagcttgcacaagtctgcaaggtcaggagctggtcatgcc
ataagtttcctcaacgctcaccgcgaagcgattcttgcgctcgtccgtgaacctcaacga
aaccttacagtgaccgcacttgatgaatgtcgattggtggtatctattttggccatggtt
gtgcacaaggtttctcccgaggatctgtattccccgtcaagttttggcgctttccacctt
gctgtgttgtctgccgctgctcacgcttttgacaaaaacacttgggtcgaaatcgccgag
gagaatagcaaaattgagtcgcagatggtacttcttaaccaagtcctgcttgccttcctc
accgccgccacaaatggcttgaaggctggatctgggaatcccgtgtttatcaccggtgta
cagaggagtcatggtagcgctgtcaaatatatcgcctctgctccttcactacaaatggcc
gtcaaccttctctctgaccttgccgagacgacggaagaggtgtctaaccagtatgaggtg
atccttgatcgaatgcaagacggaagcgatttggaagaagaggacgtcgaaaagcttcgt
aacgagttcattggcgatgcccccttatcagatgatttaatcaaggttgcctttattgca
agaagccagatgttgttcaatatgattgagtcgctccttcttctcatatggcgacatctt
ttattctatgccaacgacgttcggggatctcttgcccctatccggccagagaacctctct
ccttcactcagctcattcgccatgtctcaacaagcacagatggaagcttcgaggtcaaat
gcagggacaatgaaaatgctggaaagagtagcggcgggtctgagagggacgctgatacga
ttagatgatatggaagtgaaccttgaattgaggagactcgcgacgggcggaggtgcaaga
ggtgatgcatattctggcatgcttgtaaggaggttaaaagagatagttgggggcctagtt
ggtgaaagggaaattatggaggaggatcaacagtaa |