KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF01510
Entry
CNF01510          CDS       T00243                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K14327  regulator of nonsense transcripts 2
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013  Nucleocytoplasmic transport
cne03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CNF01510
   03015 mRNA surveillance pathway
    CNF01510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CNF01510
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     CNF01510
   mRNA cycle factors
    P-body specific factors
     CNF01510
SSDB
Motif
Pfam: MIF4G Upf2 LPD38
Other DBs
NCBI-GeneID: 3258190
NCBI-ProteinID: XP_024513020
LinkDB
Position
6:complement(join(444160..444203,444259..444400,444457..444774,444832..444893,444956..445046,445107..445172,445237..445394,445462..445753,445832..445981,446064..446140,446207..446393,446471..446539,446602..446712,446780..447829,447884..448147,448204..448403,448462..448552))
AA seq 1123 aa
MSSTADYVAKYPRRAALLHVAEKYWLDDARRPPGSLDSSLKKHTTLINKLKSSLLVGPAE
ALIKDIDGLTLAKYLDEIVAAVVEGAAKKGDPEVAVDVIIHLHSRLTPDFLPQLLQPLLT
LLSANAAATGPIGKDGEKDKEKEDRERLSKQRPVLRIVAELAMVGAWSEGVVKGAAEVGK
VLKGLMTGDPQYSNLPLITTFLKYFGRAYLGNNPVLNKAANGVKEEEAAETLPESVTELV
PPEIQKQMWQLFVNYFNTASKTLVKGQLKLLEQDKRNHEAYIKSGEIFEDRQQAYEKMTR
AVERLTTGVQTLADLLNLTPPTLPTAASLSKSGLQIVESTSSFTVRDDGPIAGGIWDDEE
EQKFYEDLIDLKEVVPASLLGIREKSKEEDQEGGGSRDNKREEEEKEEEAHKAEEEALRK
QLEQMELADSHAQPEPEPESELEPQLHTLERTASSSSLLSITHDEAQAAEGEDEQTAPVT
MTTAIEEDGLQSGPAARLSALFAALPESNNREVVDKLAVEFAFLNSKAARKRLIKFIGEV
PKQRTDLLPHYSRLIATLNPYMPDVGAGILDILDEELRYLQRKKLVRELDSTRLKNVRFY
GELAKFKVAKPFNILHVLKVFLDDFKFNIENISNLLETCGRFLLRYEGTAEVAKRMVELM
RKKQANMHLDQRHQLMLENAFYMCNPPERIVREVVQLTPMQSFIRHLLDEVLMKRTHDKV
LKLLRKLHWEDPEVYGFILSAFTNVWEVKFGNIPQLADLVFDLQRWHPEFGIAVVDQVLE
NIRIDMEENIFKFNQRRIATMKYVGELYMYRVISASVIFEILWSLLSFGHVEPMPFPGRE
SPIDAVDDFFRVRLACTLLDTCGVCFPKGSQGRKLEQYLIMLQLYITCKTELPMDVDFML
TDTLDLLRPKMPKLRTFAQAAAAVDELMATVGDMGGEDSASEDEEERQSPEDKPDEPEPV
VENVQSAEDDDEDVVLIRDTSKNDELDAEERAAFDREFAKVLADTTDTRREQRKAAPPIF
DTAVPIVKKKIEEPKAKTGNGIGEEEGRMQFMLMSKKAGKQQLRTLAIPVDSTIALNTRT
QQAQSKAEQEQLKRLVLQNERRLERSEMEGIETRGVKLRFAHS
NT seq 3372 nt   +upstreamnt  +downstreamnt
atgtcctccacggccgactacgtcgcaaagtatccgcggagagcagctctcctccacgta
gcggagaagtactggctcgacgatgccaggcgtccgcctggcagcctcgattcgtctctc
aaaaagcacacgactctcatcaacaaactcaaatcctcgctcttggtcggtcccgcggaa
gcattgatcaaagatatcgacggcttgacattggcaaagtatctggacgaaatcgttgct
gccgtcgtcgaaggtgcggcaaagaagggcgacccagaagttgccgtggatgtaatcatc
catcttcattcacggcttacccccgactttcttcctcaacttctccaacctctcctgacg
cttctatccgcgaatgcagctgccactggacctataggcaaagatggagaaaaggacaag
gagaaggaggatagagagaggttatcaaagcagaggcctgttttgaggatcgtagcagag
ttggcaatggtgggtgcttggtctgaaggagtcgtcaaaggcgccgcagaggttggtaaa
gtgctcaagggattgatgaccggcgatcctcaatacagtaatctcccattaatcaccaca
ttcctcaaatactttggccgggcctacttgggcaacaaccccgtcttgaacaaagcagct
aatggtgtaaaggaagaggaggcggcggagacgctccccgaaagtgtgaccgaactcgtt
cctcccgaaattcaaaagcaaatgtggcagctattcgtcaattacttcaacactgctagc
aaaaccttggtcaagggacagctcaaacttctcgagcaggataaacgcaaccatgaggct
tacatcaaatctggcgaaattttcgaagatcgtcaacaggcatatgaaaaaatgactcgt
gccgtcgaaagactcactactggcgtccagacactcgcagatctcctcaatctgactcct
cccaccttgccaactgctgcatcactctccaaatcgggtcttcaaatagtagaatctact
tcctcattcacagtccgtgatgatggtccaatcgcaggcggtatatgggacgatgaagag
gaacaaaaattttacgaagatttaatcgatctgaaagaggtcgtcccagcttccttgctc
ggcatcagggagaaatcgaaagaagaagatcaggaagggggtggatcccgggataataaa
cgtgaagaggaggagaaggaggaggaggctcacaaggcagaagaagaagctctccgcaaa
cagctcgaacagatggagctggccgattcgcatgctcagcccgaacccgaacctgaatcc
gaactcgaacctcaacttcacactttggaacgcaccgcgtcctcttcctccttgctctct
ataacccacgatgaagctcaagcggccgagggagaagacgagcagactgcaccagtgact
atgacgactgccatcgaagaggatggattgcaatctggtcccgcagcgaggttatcggct
ctctttgcagcgttgcccgaatcgaacaatagggaggtggtggataagttggctgtagag
tttgcgtttttgaattccaaagcggcaaggaagaggctcatcaagttcatcggtgaagtg
ccaaaacaaaggaccgacttgttaccgcattactctaggcttattgccacgctgaatcct
tacatgccggatgttggcgcaggtattcttgatatcctggatgaagaattgagatatttg
caaaggaagaaacttgtccgagaattggatagcacacgtctcaagaatgtcaggttctat
ggcgaattggccaaattcaaggttgctaaacctttcaacattcttcatgtactcaaagtc
tttttggatgacttcaagttcaatatcgaaaacatctcaaacctgttggagacttgcgga
cggtttttgctgcggtacgaaggaacagcagaagtggccaagcgtatggtagagttgatg
aggaaaaagcaagcgaatatgcatcttgaccagagacatcagcttatgctggaaaatgcc
ttttacatgtgcaacccgcctgagagaatagtcagagaagtggtacagctcactcctatg
cagagtttcatccggcatcttcttgatgaagtgttgatgaagcgaacgcacgataaggtg
ttaaaactgctgagaaagttgcattgggaagatccagaggtctacggctttatcctctct
gcctttacaaatgtttgggaggtcaagtttggtaatattcctcaactcgcagatctcgtc
tttgatcttcaacgatggcatcctgaattcggtatcgcggtcgttgaccaggtcctggaa
aacattcgcattgacatggaggaaaacatcttcaagttcaaccagagaagaatcgcgaca
atgaagtacgtaggagagctgtatatgtacagggtcatcagcgcttccgtcatctttgaa
attctttggtcacttttgtcttttgggcatgtcgagccaatgccattcccaggtagagaa
agccctattgacgccgtagatgactttttccgtgtccgtctggcttgcacattactcgat
acctgtggcgtatgtttcccaaaaggctctcagggacgcaaattggaacagtacctcatc
atgcttcaactctatatcacatgcaaaaccgagctaccaatggatgttgactttatgctg
acagataccctcgaccttttgcggccaaaaatgcccaagctaagaacatttgcgcaagca
gcagctgctgttgatgagttgatggctacggtaggcgacatgggcggagaagatagtgca
tcagaggacgaagaggaacgtcaatcacctgaagacaagcctgacgagccggaacctgtc
gtcgaaaacgtccagtcagcggaagatgacgatgaggatgtcgttctcatccgcgacacc
tccaaaaatgacgagcttgatgccgaagaacgagctgcatttgatcgagagtttgcaaaa
gtattggcagatactaccgataccaggcgagaacagagaaaggccgcgccaccgatcttt
gacactgctgtgcccattgtcaagaaaaagatcgaagaacccaaggcaaaaactggtaac
ggaatcggggaggaagaaggaagaatgcagttcatgttgatgtccaagaaggcaggaaaa
cagcagctgcgaacgttggccattcctgtggattccaccattgcgttgaacactaggact
cagcaagctcagagcaaagcggagcaagagcagctcaagaggttggtattgcagaatgaa
agaaggttggaaagatcagaaatggaaggcatcgagacgagaggtgtgaagctccgtttt
gcacattcatga

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